Sequence details NCBI ID: XM_004872874.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Polk
Gene Name polymerase (DNA directed) kappa, transcript variant X1
Entrez Gene ID 101718580

Database interlinks

Part of NW_004624905.1 (Scaffold)

For more information consult the page for NW_004624905.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POLK ENSCPOG00000000934 (Guinea pig)

Gene Details

polymerase (DNA directed) kappa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000839, Guinea pig)

Protein Percentage 80.71%
CDS Percentage 87.69%
Ka/Ks Ratio 0.47032 (Ka = 0.1123, Ks = 0.2387)

POLK ENSG00000122008 (Human)

Gene Details

polymerase (DNA directed) kappa

External Links

Gene Match (Ensembl Protein ID: ENSP00000241436, Human)

Protein Percentage 82.67%
CDS Percentage 87.75%
Ka/Ks Ratio 0.29443 (Ka = 0.0936, Ks = 0.3179)

Polk ENSMUSG00000021668 (Mouse)

Gene Details

polymerase (DNA directed), kappa

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022172, Mouse)

Protein Percentage 76.26%
CDS Percentage 81.28%
Ka/Ks Ratio 0.27069 (Ka = 0.1471, Ks = 0.5435)

Polk ENSRNOG00000025373 (Rat)

Gene Details

polymerase (DNA directed) kappa (Polk), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029244, Rat)

Protein Percentage 74.15%
CDS Percentage 79.32%
Ka/Ks Ratio 0.26862 (Ka = 0.1653, Ks = 0.6153)

Genome Location

Sequence Coding sequence

Length: 2589 bp    Location: 2844544..2803321   Strand: -
Raw sequence   
>XM_004872874.1
ATGGATACCACAAAGGAGAAGAATGACAATTACAAAGATAATCTTCTGCTTAGGATGGGACTTAATGATAATAAAGCAGGAATGGAAGGATTAGATAAAGAGAAAATTAATAAAATTATAATGGAAGCCACAAAGGGGTCCAGATTTTATGAAAATGAGCTCAAGAAGGAAAAACAAGTCAACCAACGAATTGAAAATATGATGCACCAAAAAACACAAATCACCAGCCAGCAGCTAAGGAATGCACAATTGCAGGTTGACAGGTTTGCAATGGAAATAGAACACCGCCGAGATTTGAACAATACCATAGTACATGTTGACATGGATGCTTTCTATGCTGCTGTAGAAATGAGGGACACTCCAGAACTGAAGGATAAACCCATCGCTGTAGGATCAATGAGTATGTTGTCTACTTCAAATTACCATGCAAGGAGGTTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGACTCTGCCCACATCTCATTATAGTGGCCCCAAACTTTGACAAATACAGAGCCGTGAGTGAAGAGGTTAAGGAAATACTTGCTGATTATGATCCCAATTTTATGGCCATGAGTCTTGATGAAGCCTACTTGAATATAACAAAGCACTTACAGGAAAGACAAAATTGGCCTGAGGAAAAAAGAAGTTATTTCATCAAAACTGGAAACTTGGCAGAAAATGATGAACCAGGAAAGGAAGTTAATAAGCTGAGTGAGTCTGACCGGTCCATCTCTCCACTACTTTTTGAAGACAGTCCTCCTGATTTGCAGTCCCCAGGACATCCTTGCCAAGTGAACTCTGAAGAACAAAACAATCCTCAAATACCACAGAATTCAGTTGTTTTTGGAACTTCAGCTGAGGAAGTGGTAAAGGAAATTCGGTTCAGAATTGAACAAAAAACAACACTAACAGCCAGTGCAGGCATTGCTCCCAACACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAAATGGACAATACCAAATTCTCCCCAGCAGACAAGCTGTGATGGACTTCATCAAAGACTTACCCATTCGAAAGGTTTCTGGAATAGGAAAAGTTACAGAGAAAATGTTGAAGGCCCTTGGAATTATTACTTGTACAGAACTCTACCAACAGAGGGCATTGCTTTCTCTCCTTTTCTCTGAAACATCTTGGCATTATTTTCTTCATATTTCTCTGGGCCTAGGTTCAACCCACCTGGCAAGGGATGGAGAAAGGAAAAGTATGAGTGTTGAGAGGACATTTAATGAGATAAACAAAGCAGAAGAACAGTACGATTTGTGCCAGGAACTTTGCAGGGAACTTGCCCAAGATCTCCAGAAAGAAGGACTAAAGGGTCGAACTGTTACCGTTAAACTGAAGAATGTGAATTTTGAAGTAAAAACTCGTGCATCTACAGTTTCATCTGTTGTTTCTACCACAGAAGAAATATTTGCCATTGCAAAAGAATTGCTAAGAACAGAAATTGATGCTGATTTTCCATATCCCTTAAGATTAAGACTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAAGACAAAAAACACCAACAAAGGAGCATCATTGGCTTCTTACAGGCTGGGAACCAAGCTCCATCAGCCACTGAGTATATAGAAGAGAGAACTGATAAAGATCAGTTTGTAAAACCTCTAAAAACATCTCATAAGAAGAGTTTTTTTGATAAAAAACAATCAGAAACAAAATGGAGCCACCAAGACACATCAAAATGTGAAACTGTGGATAAACAAAATTTACAGACATCACAGCCATTCCAAATTATAAAGAAGAAGACGAGTGAGAATTTAGAAACATCAGAGAGTTCAAATAGCTGTCAGATGATATTTACGTGTCCTGTTTGCTTTAGGGAGCAAGGAAGCATCAGTCTGGAGGCCTTTAATAAACATGTAGATGCATGTCTCGATTGCCCTTCAGTCAGTGAGAACTGTAAAGTGTCCACTTGTTCACAGGCTACCTCTGCTGTTAACCAGAAAGAAAACACACATCATTCCTTTTCACTTTGGGAAAAGCAAGATTATGAGGCCCGTCAGAAAAATATAGAAGTCACTTCAGAAGATTGTGTCGATTTGGTAGAGCCTAAAGATAGCTCACTGAAAGCTAGAAGTATAGACTCTCTAAGGAGAAAGCACAGCAAAGAGGAGCATTCTAGTCTTCCAAGCAAGTCTTCTTGTACTGTTTCATTGGAAAATGCAGACGTTGGGTTATTAAGTAGGCAAGAATCCCTCCAACCTTTGTCATTTAAAGTGACAGCTGGCCAAGCTCTGGTTTGTCCTGTTTGTAGTCTAGAACAAAAGACCTCAGATCTTACCCTATTCAATGAGCACGTGGATGTTTGCTTAAATAAAGGTATTATCCAAGAACTGAGAAATGATAGCGTTAATACAATCAACGAACCCGAAGAAAGCTCCAAAAGTACTGGTATGTCAAACAAAGTACAGAAGACTGTAGCAAAAACAAAAAGGCCAGGACTGATGACAAAGTACTCAACATCAAAGAAAATAAAACCAAACAATCCCAGACATACCCTTGATATATTTTTTAAATGA

Related Sequences

XP_004872931.1 Protein

Polk PREDICTED: DNA polymerase kappa isoform X1 [Heterocephalus glaber]

Length: 862 aa      View alignments
>XP_004872931.1
MDTTKEKNDNYKDNLLLRMGLNDNKAGMEGLDKEKINKIIMEATKGSRFYENELKKEKQVNQRIENMMHQKTQITSQQLRNAQLQVDRFAMEIEHRRDLNNTIVHVDMDAFYAAVEMRDTPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPHLIIVAPNFDKYRAVSEEVKEILADYDPNFMAMSLDEAYLNITKHLQERQNWPEEKRSYFIKTGNLAENDEPGKEVNKLSESDRSISPLLFEDSPPDLQSPGHPCQVNSEEQNNPQIPQNSVVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLARDGERKSMSVERTFNEINKAEEQYDLCQELCRELAQDLQKEGLKGRTVTVKLKNVNFEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDADFPYPLRLRLMGVRISSFPNEEDKKHQQRSIIGFLQAGNQAPSATEYIEERTDKDQFVKPLKTSHKKSFFDKKQSETKWSHQDTSKCETVDKQNLQTSQPFQIIKKKTSENLETSESSNSCQMIFTCPVCFREQGSISLEAFNKHVDACLDCPSVSENCKVSTCSQATSAVNQKENTHHSFSLWEKQDYEARQKNIEVTSEDCVDLVEPKDSSLKARSIDSLRRKHSKEEHSSLPSKSSCTVSLENADVGLLSRQESLQPLSFKVTAGQALVCPVCSLEQKTSDLTLFNEHVDVCLNKGIIQELRNDSVNTINEPEESSKSTGMSNKVQKTVAKTKRPGLMTKYSTSKKIKPNNPRHTLDIFFK