Details from NCBI annotation

Gene Symbol Tmem171
Gene Name transmembrane protein 171, transcript variant X3
Entrez Gene ID 101715727

Database interlinks

Part of NW_004624905.1 (Scaffold)

For more information consult the page for NW_004624905.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM171 ENSCPOG00000019983 (Guinea pig)

Gene Details

transmembrane protein 171

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020111, Guinea pig)

Protein Percentage 80.06%
CDS Percentage 85.07%
Ka/Ks Ratio 0.38766 (Ka = 0.1223, Ks = 0.3156)

TMEM171 ENSG00000157111 (Human)

Gene Details

transmembrane protein 171

External Links

Gene Match (Ensembl Protein ID: ENSP00000415030, Human)

Protein Percentage 70.99%
CDS Percentage 78.91%
Ka/Ks Ratio 0.43128 (Ka = 0.194, Ks = 0.4498)

Tmem171 ENSMUSG00000052485 (Mouse)

Gene Details

transmembrane protein 171

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070369, Mouse)

Protein Percentage 73.29%
CDS Percentage 78.88%
Ka/Ks Ratio 0.36152 (Ka = 0.1791, Ks = 0.4954)

Tmem171 ENSRNOG00000015449 (Rat)

Gene Details

transmembrane protein 171 (Tmem171), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020726, Rat)

Protein Percentage 73.07%
CDS Percentage 78.22%
Ka/Ks Ratio 0.32365 (Ka = 0.177, Ks = 0.5468)

Genome Location

Sequence Coding sequence

Length: 981 bp    Location: 2167178..2176382   Strand: +
>XM_004872869.1
ATGTCTTCCATAGCCATTGCTGAACCAGATGGGGATGAGCAGGACAGGGGTGCCAGCAAGCTCATTTTCTTCCTCTTTGTCTTTGGCGCTGTCCTGTTGTGTGTGGGACTCCTGCTCTCCATCTTTGGGTACCAGGCATGCCAATATGAACCTCTCCCAGACTGCAACATGGTGCTGAAGATTGCTGGGCCCTCATGTGCAGTGATAGGGCTCGGTGCTGTGATCCTGGCCCGCTCCCGGGCAAGACTTCAGCTCCTGGTGAGAAGGCGGCAAGGCAACCAGGTCGACTCTGACCAAGCTTTCCTCTGTGGAGAGAGCCGCCAGTTTGCCCAGTGCCTGATCTTTGGGTTTCTGTTTTTGACAAGTGGCCTGCTCGTTAGCATCCTGGGCATTTGGGTCCCTGGATGTAGCTCAGACTGGGCACAGGACCTGCTGAATGAGACGGACACTATCAGTGCAGAGCCCCAGATCTGTGGGTTCCTTTCCCTGCAGATCATGGGGCCTTTGATTGTGCTCATGGGATTGTGTTTCTTTGTGGTTGCCCATGTTAAGAAGAAAAACAACTTGAGTGTGAGCCAGGATGCCTCTGAAAGTGAAGAGGGACATGGCCCCAGCACAGAGCCTGTCCAGGTCACTGTAGGTGACTCGGTGATAATATTCCCGCCCCCTCCACCACCATACTTTCCTGAGTCTTCCACATCTGCAGGAAGTCAAAGTCCTGGGGCCAACAGCTTGCTGCCCACTGACAGCCCTCCTCCCTATTTCAGCCTTTTCAGCCATGGCAGGACCTCAGCCCTTGAGAACCAGGACACAGCCCATGAGCAAGAGCATGAATTTGTATACACCATTTCTGGGCCTCACTCGCCTCCTGAGATCACACATGCTCCGAGAGTTTTATTGGAATTGCCCCCGAGATATGAGGAGAAAGAAACTCCCACAGCCACATCTTTGTCTCTACCTTCTGAGCTTTCTGCACCATGA

Related Sequences

XP_004872926.1 Protein

Tmem171 PREDICTED: transmembrane protein 171 isoform X3 [Heterocephalus glaber]

Length: 326 aa      View alignments
>XP_004872926.1
MSSIAIAEPDGDEQDRGASKLIFFLFVFGAVLLCVGLLLSIFGYQACQYEPLPDCNMVLKIAGPSCAVIGLGAVILARSRARLQLLVRRRQGNQVDSDQAFLCGESRQFAQCLIFGFLFLTSGLLVSILGIWVPGCSSDWAQDLLNETDTISAEPQICGFLSLQIMGPLIVLMGLCFFVVAHVKKKNNLSVSQDASESEEGHGPSTEPVQVTVGDSVIIFPPPPPPYFPESSTSAGSQSPGANSLLPTDSPPPYFSLFSHGRTSALENQDTAHEQEHEFVYTISGPHSPPEITHAPRVLLELPPRYEEKETPTATSLSLPSELSAP