Details from NCBI annotation

Gene Symbol Bdp1
Gene Name B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Entrez Gene ID 101708558

Database interlinks

Part of NW_004624905.1 (Scaffold)

For more information consult the page for NW_004624905.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BDP1 ENSCPOG00000005918 (Guinea pig)

Gene Details

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005339, Guinea pig)

Protein Percentage 75.27%
CDS Percentage 86.04%
Ka/Ks Ratio 0.62444 (Ka = 0.1425, Ks = 0.2282)

BDP1 ENSG00000145734 (Human)

Gene Details

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB

External Links

Gene Match (Ensembl Protein ID: ENSP00000351575, Human)

Protein Percentage 67.71%
CDS Percentage 81.09%
Ka/Ks Ratio 0.58269 (Ka = 0.2032, Ks = 0.3488)

Bdp1 ENSMUSG00000049658 (Mouse)

Gene Details

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038321, Mouse)

Protein Percentage 57.5%
CDS Percentage 71.85%
Ka/Ks Ratio 0.46389 (Ka = 0.3228, Ks = 0.6958)

Genome Location

Sequence Coding sequence

Length: 7134 bp    Location: 525387..635608   Strand: +
>XM_004872850.1
ATGTTCCGCAGGGCGCGTCTTAGTGTGAAGCCGAACGTCAGGCACGGTGGTGGCGCCCGGGGCTCTGCTGCCAAGCCGCAGCGTGGACTGGAGGCCGCCAGGCCACCGGAACCTGCCACGGACCCCAGTCCAAAGCCAGTGGAGCCCACAGATATGCCCGTGGCGGTTTTCAGGGGAGCGGAACCCCAAGAAAAGGCTCCTACGAGCAGTGATGAAAAGATCGATGGTGAAAATAATGTTGAAGAATCCTATACATCATCCTCTGCTGTTTCCCTGAGAAGGCGACTATCAAGTACTTCTAGTCTAGTTGAACCTAGTGTCAGTGTTCCTTCACAGTCTCCTCCCTTACCTACGGTTAATCAAGGTGTTCCACAGCCTAACCCTGTTCGAACAAAAGAGAAACAGCTATGCTCAGACAGATACCGATTATACAAAGCCCAGAAACTACGGGAAATGTTAAAAGAAGAATTGAGAAAGGATAAGAAACAATGGAAAAACAAATATGCCATAAATGAAAGCCAGATGCCACCAGATCGTTCAAAAATGACTATGAGAGACTTCATATATTACCTACCAGATAACAATCCAATGTCTTCTTCACTGGAACAGGAAAAGAAAACTGAAAAACCATTGACTCCAGTCCAGGCAAAAGATAGGCAAGAAAGTAAGAGTGCTCTTGATGCTGAGGATTATGAAGCAGCAGAAGAAGAGACAGATGATGGGCCATTGCTGGTTCCTCAAGTGAAAGTGGCTGAAGATGGTTCTATTATTTTGGATGAAGAAAGTTTAACTGTGGAAGTTTTAAGGACAAAAGGCCCATGTGTTGTTGAGGAAAATGATCCTATATTTGAGTGTGGTTCTACAACTACATATTCCAGCTTTAGGAAAAACTATTACTCCAAACCATGGTCAAATAAAGAAACAGATATGTTCTTTCTAGCCATCAGCATGGTAGGAACTGACTTTTCTATGATTGGACAACTTTTTCCTCACAGAGCAAGGATAGAAATTAAGAATAAATTTAAACGTGAAGAAAAAACAAATGGGTGGAGAATAGACAAAGCATTCCAGGAAAAACGCCCTTTTGACTTCGATTTTTTTGCTCATTTGCTCCAGAAAGTTCTTGCGGAAGAAGAGAAAAGAAAACAAAAATCGACTAAAAATCAGGGTGTAAAGAAGAAATCCTCCAAACCACAGAAAAATGTAAAAGTGAAAAAAGTTACGAGTGAAGTTGTGGATGATGATCCAGATGAATGTGTGAGTGCTAAAATTTCAGACATAGAAGGATCTCAAAGGGATGCTCAGACAGTCACAGAAGAGGATTCTCTGACTTCATCAGGGCAGGATGCAGAAGTTGTATTAGAACAAGACCAAAATCAAAAAAGAAGAAGAAAGAAGAACCAAGATGGAGCAAATGAACAGGAAGTACAAAGTCTTTCAGGAAATGCTGCTGTTCCATTAGGTTTTTCTGAAGCAGAAAAGGATAAGAATAAATGTCAGTCTTTAAGGCCTGAGGTGAATGAAAGTGAACGGAGTGAGGAACAGATGCCCTCTTGCACACAGAACCTAGATGACACTGTGGATTTAGTCTCCAGTGAAACAGTTGAGCAGAGAAAGGACCCCATCCTTTCACCAAGTCATCACCACAGTAACATACCAGCAGCAACTGAATCTTCTGAATCCAGCCCTTCACCTGTGTCTCCGTCAGAAGTTGCAATCACAGCACTGTGTGAGGTGAATCCTGCCAAGCAGAGTTGTATAAAAGAAAGAAATGTTGACCAAAAGAGTCAATCACTGGAAGCTAGTCAAGCAGAAAATGTTAAACCAATGTTGAGAGGTCGACTCCAGAGACCCAAACCCAATCTGTCAAGGGCAGTTGGGAAGAAGCTAGTTCTTTCACAAGCCAAAACAGATGCAGAGAATGAGAGTTCGCATTCAGACACCTCCACTGAAAAGAATCACATGGAAAAGAATAAAATGAATACATTTGACAGTGGTGGAATGGAGAATACAGGAAAGGAGAACCAAGAAGCTGAAACTATGTCTAATTTAGGTGAAAAAACTTGTCTCCTGGAAGATAATCAACCAAAGGCTCCCAGATCTGCACAACCAGTGAGGGGCCGATTACCAAGACCAAAGCCAAATGTGTGGAAAGTTACAGAAAGAAAAGAAACCATCACATCCCAAAAAGAAGGAGCCAGTGTAGAGAAGACTCAGAATGAATCCTGTGTCAACAAAGATATACTTCAACAAATGGAAGATCAATCATATAAAAATTTGGAGTGTGAAGACAAACAACCTGAGAAAAAAGATACCTCTTTTCAAAATGTACAGCCAGATGAGCCCAGGGCGCTTAATGAATGTCTAAGCATTCAAGAGGATAGTCAAGCAAATGTACTCAAACAAGTCCCCATTCTAAGAACTCAATTTCAGAAACCAAAGCCAAATATAGTAAGAGGAATTAGAAGAAGAAAGATTCCTTCAAAGGAAGAGGTACCAGAGGAGAGTCCTGTCTCTGGGGGAGAGACAGCAGCTTTGAGGGAGCTTATAAGACCAGACACCTCACCAGGGGAGAAGGTACCAGTGGTGATCACTGCTACTTCTAAGGAAATGAAGTCAAATTTAAGAGAAACTGGAAGAAGAGACACCTCTCCCAGTGAGAACATAGCAGAGATGAGTGATGTCACTGTGATAATGGAGACAGGGTTGAAAGCAACTGTGACAGAGAGTCCCCCTAGGGAGAAGACACCAGAATTGATTGATACCACTGGGGAAATAGAGACAGATTGGAAGGAAAGCAGAAGAGAAATATTCCCACAGGAAAATGACCCAGGGGAGGTCAAGTCTATAGGTGAAACAGAAGCAGGTTTGCAAGAAACTCGAAGAGAGAACCCCACAGGAGAGAGGACCCTAGAGATGATTGATCCTACTGAGGAAAGAGGGACAGATTTGGAAGAATCTGAAAGAAGAGAAATACCTGTCCCAGGAAAGGTCCCAAAGGAGCTCAAAACTATAGGTGAAGTGGAAACAGATTTGAAAGACATTGAAGGAGAAATTTCCCAAAGGGAGAAGGTACTAATGGGGGTCAGTACTCTAGAGGAAAGGGAGATTGACTTGAAAGAAACTGGAAAAGAAGACATTTCCCTGATGGAGACAATATTAAGAAAGACGATTGTCACTGAGGAAATAGAGGCAGATTTAAAAGAAACTGAAACAGAAATTTCCTTGAGGGAGAGAGAAGCTGAGCAGATTTGTGTTATTGAGGAAATGGTGGCAGATTTGGAAAAAACTGGAAACATAGATATTTCTCCAAGAGAAAACCTGGAAGAACCTGCTACCTCAAGAGAAATTGAGACAGATGTAATGCAGAAGAGTAGTGCTGACTGCAGCATTGTGCCTTCCCTGGATGTGAAAAATATTGTCAGTGAGGTACAGCCGGTGGTGCCTACATCTATAGAAGAAAATAATTCTGAAAAAGAACTGTCAGATCACTTAAGTTGTTCAAAGCCTGCTTCACAGATATCTGAATTTTATAAAACAGAAGACCAGGGGATACAACCTCCAGATGTTTCCGAGCACTTTTCAGATACTAATTTAAGCCAATCTCTTCCTCAAGAACAGAAGCCACTTGAAGTGAAACCAGCACCTTTTGTGAGAAGTCGATTCAAAAGACCAAAACCAAACTTAGCAAGAGCAACTTCAAAGAAAGTGACTACAGAAGCAGAAAAATATGTACCTGAGAAGAAGTTGGAAACAAATCACATGGAAACCATTGAGATTCAACAAGACAGAGAACAAGCTAATACTCTTCCTTTACAACCTGATGTGACTTCCATATTGGTATCAAGAGAAAAAGATAAATCAGGCCCCAAGAAAGAGGAGACTGTGATATTACCATGTATACAAACTGAAAAGGACCCAGCGCCGAGTGCTTGTGAACCTGCAGAGCATTCTCAGTCAGTGCAGACCCAGGAAAATGACTTAGCTGTTCCCATGGTGATTCAGAAGGTAAATACTTTCCAACAAGAAATGAAAGAAACTGTTACCCAAATGGTTCTACCAATGAGGGCCCGACTTCAGAGGCCCAAACCAAATGTAAAAAATGCTAGACATAGGCAAGTAGTAGAAAAGGGTGAAGCCAAAGGAATGAATAAAAATGAAAGAACAGTGCTACAAAAAGATGAAACTAACAAGAAATCCCTGATAGTGTCAAATTCTCAAATTGAAACTGAAATTGAAGTCGTATCCTCCAGAGTTTCAGAATGCAATATGGATGAAAATCAGAGTCACGAGGTTCTTGTAGGAAATCTACACGTTAACAAAAAAAATACATCCGATGCAAAGATGAGATTTGAAAATAAGCCCTGTGTTCCTAGTCCAGCACAGTTGATAAGAATGAAATTCCAAAAAACTAAGCCAGATTTGGGAAGAGCATGCAGTAGGAAGGTAGAGGAAGCGGGTATAGAAAAAGGCCCAGCAGATCAGAGTGGAGCAAGTAAACCAGAAGAAGATTCACTGCACCAAGGAAATCTTGACTCCCAGCTCCTTCTAAAAGAAGAAGCTGAAATTGTGACATCTCCAGGGATTTCAGCAAGAAAAGATTGTATAGGTTCTGAAGAGTCTGTTTTGGCCAAAAAAAATGTTCAATTAGAAGAGGTTGGATCATCGGAAAATGTTAGAGAGGAAACTGTGCAAGATAATTCTGCGTCTTCAGTTGTTGAAGAGCAGTGTTTCAGTAAACTAACAAGCAGTCCACAACTGTTGAAAGAATCATATTACTCTAAAACTGCTCTGGATGGAAGAACAATGATCTCTTCTGCCTCTGGGAGTGAGATAGATCACAGTGAAAGGAGAATGCAGAGGAAAATCAAAACCAGTGTCACCAGAGGGCGGGGAACAAAGCGAGCTCGGGCTAAGACCTCTAGGAAGGAGCCTCGGGCTCCCAAGGCCATGCTGGTGACTCTTCGGGCTTCCCAGGAAGAAGATGATGACGATGATGCTCAGGACTTTGAATCCAACTATGAAGATGAGAGCTGCCATCTTGCCCCAGAAGAAGTAAACAAAGCACCAGTGTTTGTCCCTCTTGGTCTCAGATCCCCTGAACCTGTTTCTGCTCAGATTGAGGAAACGATGGAAGAGCTTGAAATAACTGTGAATGTTGCAGATGTAGGATGTGTAACTGTTGTTGAACATCTGCTCTCAAACACAGATGAGACTATTCAGAAACTAGAGCAAGAAAATAATTTGAATATGTCATTTGAAATGACCACAGGTGAACAGAACCAGGATGAAGCAGGTACCAGTGATGGGAGCACGGAAGCTGCCATAACTTTACTTACAATGGGAGATCTAATGCTGCAGTCGGAGATGAGTACTGACCAGGGTGATGTAGGAGTATGTGTATTTCCTGATGTTCATTCAAAGGATAAAAGTCATATTCCTTTTAGCCCAGATAATGTAAGTCACAAAATTGTTCACGAATGTCAAGAGCTTTCTTCATTTGTCATTAATACATCTGCAACTGAAGAAAACAAGTGTGTATCAGAGAAGCAGAATAGAGAAGAAGTTGGATTAAAGGAGGAAATAATGGAGAACACTACATCAACCAGGAGTACAGCTTCTAAAGTGGATAGTAGTTTTCAAAATAGAAGTAGATTTGTCAGGCCTGAGCCAAATCTTGAGGTATTAGTGACCAACAGGGTTGATGCTCATCAGGAAGTTTCCGGTGTATCCAAAGGGGATGAAGTGGAAAGTCAAAAAGAAACTGAGAACATTGCTTCCAAGGCAACAGAATTGGAAGATAAAAACTCTGGGCCAGTCAGGACAGCAGAAAATCAGGAGCAGAACCAATTGGCATGTGTGCAGCATATCAAAGGGACCAGTATTTCACAAGAAGCAAATCCAACTGCAAGAAATGAGGATCAAGAAGAGAACTCTCAAGAGGTTCAGATGTTGCCAGTTGCTCCCAATCTTTCCTCTGAGGCAGGGCCCCCCACACTTGTTTCCAGTGGGGGTCTCAGTAAGAATTCTGTTGAAGAGCCCCTGATAAAGGATGCTAAAGGAGACAGTGTATCCACACTTCATGTGCCGGAGTGTACACCAACTAGTATTCCAGAAGTGCAACAAGAGAATATAACCAACACTCAAGACCTAACAGTGAATCTGTTTGGGAATGTGCATCAAGACGGAGAGGATGAGCAAGCGTTCATTTTGACTCTAGTGGAAATCCCAGCCAGTGCTGCAGAGGAATTCACTGATGCTGCTGCACAGTTAATGCCAAGTCCCGTACTGCCCGCGCCCATCCTGGTCAAATCTGGTAATCCTAAAGAAAAGGCTGATGTTAGGAAGAGATTTCACTGCATGCTTGATGAAAGTGATCAAGTTCCTCCTACCAAAAAAAGTTCACTCATTTTAAGGAATGACCTGCAACAGTATACCTCTGAGGTGTGCTCAAAGGAATTAAATGCTTTTGAGGAAAAAGGAGAATCTCACAAGGGACAAGGTATTTCTACCACCTCAAGAAGCACATATACAATTCCAGAACCTCAGAAAGAGCGACTTGAACCAGTCTTGCAAAATAAAGAATCTAGATCTCTTGATAAAATAATAGGTACATGTATAGAGAAGAATATGCCTCAGTTGTCTCAGGATAACGCGGTTATGTCTGATGAAGAAAGAATTGATGCAGCTTCTAAGTCTGAACAGAGGGGAGTCAGGACAAAGTCTTCAAAAGCCCCACTCACCAGGTCTGGCAGAAGACCCCTGGGATTTTTAGCTTTAATATGTTCAAAGAATAATTTGATGGAGTCTGATGAACCTACTCATGTCCGTAGCAAAAAGCGCTTGAAACCTCTTCTACCTGTATCAAGACGGAATTTGAAAAGATCTAATCCACCCAATGAAACCCAGAAAAAAAATCAAGAGTCCTCTAATGTGCTTCCATCTCCAAGTGATGCCACCAGTACTCAAGCTGAGGATGCCGGCAACGCAGCAACTCAGGTTTCCTGTGATCAACCGTCACTGAAAGAAGAATGTAAAAGTGGCCAAAAGCAGGCACCTGAGTCGGAGGAGCCATCCACAGTCTCGGAATATTTCTTCGGTGATATCTTTATCAAAGTAGATGAAGCAGAATAA

Related Sequences

XP_004872907.1 Protein

Bdp1 PREDICTED: transcription factor TFIIIB component B'' homolog [Heterocephalus glaber]

Length: 2377 aa     
>XP_004872907.1
MFRRARLSVKPNVRHGGGARGSAAKPQRGLEAARPPEPATDPSPKPVEPTDMPVAVFRGAEPQEKAPTSSDEKIDGENNVEESYTSSSAVSLRRRLSSTSSLVEPSVSVPSQSPPLPTVNQGVPQPNPVRTKEKQLCSDRYRLYKAQKLREMLKEELRKDKKQWKNKYAINESQMPPDRSKMTMRDFIYYLPDNNPMSSSLEQEKKTEKPLTPVQAKDRQESKSALDAEDYEAAEEETDDGPLLVPQVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFECGSTTTYSSFRKNYYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDFDFFAHLLQKVLAEEEKRKQKSTKNQGVKKKSSKPQKNVKVKKVTSEVVDDDPDECVSAKISDIEGSQRDAQTVTEEDSLTSSGQDAEVVLEQDQNQKRRRKKNQDGANEQEVQSLSGNAAVPLGFSEAEKDKNKCQSLRPEVNESERSEEQMPSCTQNLDDTVDLVSSETVEQRKDPILSPSHHHSNIPAATESSESSPSPVSPSEVAITALCEVNPAKQSCIKERNVDQKSQSLEASQAENVKPMLRGRLQRPKPNLSRAVGKKLVLSQAKTDAENESSHSDTSTEKNHMEKNKMNTFDSGGMENTGKENQEAETMSNLGEKTCLLEDNQPKAPRSAQPVRGRLPRPKPNVWKVTERKETITSQKEGASVEKTQNESCVNKDILQQMEDQSYKNLECEDKQPEKKDTSFQNVQPDEPRALNECLSIQEDSQANVLKQVPILRTQFQKPKPNIVRGIRRRKIPSKEEVPEESPVSGGETAALRELIRPDTSPGEKVPVVITATSKEMKSNLRETGRRDTSPSENIAEMSDVTVIMETGLKATVTESPPREKTPELIDTTGEIETDWKESRREIFPQENDPGEVKSIGETEAGLQETRRENPTGERTLEMIDPTEERGTDLEESERREIPVPGKVPKELKTIGEVETDLKDIEGEISQREKVLMGVSTLEEREIDLKETGKEDISLMETILRKTIVTEEIEADLKETETEISLREREAEQICVIEEMVADLEKTGNIDISPRENLEEPATSREIETDVMQKSSADCSIVPSLDVKNIVSEVQPVVPTSIEENNSEKELSDHLSCSKPASQISEFYKTEDQGIQPPDVSEHFSDTNLSQSLPQEQKPLEVKPAPFVRSRFKRPKPNLARATSKKVTTEAEKYVPEKKLETNHMETIEIQQDREQANTLPLQPDVTSILVSREKDKSGPKKEETVILPCIQTEKDPAPSACEPAEHSQSVQTQENDLAVPMVIQKVNTFQQEMKETVTQMVLPMRARLQRPKPNVKNARHRQVVEKGEAKGMNKNERTVLQKDETNKKSLIVSNSQIETEIEVVSSRVSECNMDENQSHEVLVGNLHVNKKNTSDAKMRFENKPCVPSPAQLIRMKFQKTKPDLGRACSRKVEEAGIEKGPADQSGASKPEEDSLHQGNLDSQLLLKEEAEIVTSPGISARKDCIGSEESVLAKKNVQLEEVGSSENVREETVQDNSASSVVEEQCFSKLTSSPQLLKESYYSKTALDGRTMISSASGSEIDHSERRMQRKIKTSVTRGRGTKRARAKTSRKEPRAPKAMLVTLRASQEEDDDDDAQDFESNYEDESCHLAPEEVNKAPVFVPLGLRSPEPVSAQIEETMEELEITVNVADVGCVTVVEHLLSNTDETIQKLEQENNLNMSFEMTTGEQNQDEAGTSDGSTEAAITLLTMGDLMLQSEMSTDQGDVGVCVFPDVHSKDKSHIPFSPDNVSHKIVHECQELSSFVINTSATEENKCVSEKQNREEVGLKEEIMENTTSTRSTASKVDSSFQNRSRFVRPEPNLEVLVTNRVDAHQEVSGVSKGDEVESQKETENIASKATELEDKNSGPVRTAENQEQNQLACVQHIKGTSISQEANPTARNEDQEENSQEVQMLPVAPNLSSEAGPPTLVSSGGLSKNSVEEPLIKDAKGDSVSTLHVPECTPTSIPEVQQENITNTQDLTVNLFGNVHQDGEDEQAFILTLVEIPASAAEEFTDAAAQLMPSPVLPAPILVKSGNPKEKADVRKRFHCMLDESDQVPPTKKSSLILRNDLQQYTSEVCSKELNAFEEKGESHKGQGISTTSRSTYTIPEPQKERLEPVLQNKESRSLDKIIGTCIEKNMPQLSQDNAVMSDEERIDAASKSEQRGVRTKSSKAPLTRSGRRPLGFLALICSKNNLMESDEPTHVRSKKRLKPLLPVSRRNLKRSNPPNETQKKNQESSNVLPSPSDATSTQAEDAGNAATQVSCDQPSLKEECKSGQKQAPESEEPSTVSEYFFGDIFIKVDEAE