Details from NCBI annotation

Gene Symbol Cbx5
Gene Name chromobox homolog 5, transcript variant X3
Entrez Gene ID 101710464

Database interlinks

Part of NW_004624904.1 (Scaffold)

For more information consult the page for NW_004624904.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CBX5 ENSCPOG00000007737 (Guinea pig)

Gene Details

chromobox homolog 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006971, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 96.55%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2265)

CBX5 ENSG00000094916 (Human)

Gene Details

chromobox homolog 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000209875, Human)

Protein Percentage 100.0%
CDS Percentage 94.07%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3175)

Cbx5 ENSMUSG00000009575 (Mouse)

Gene Details

chromobox 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113157, Mouse)

Protein Percentage 97.91%
CDS Percentage 91.1%
Ka/Ks Ratio 0.01949 (Ka = 0.0096, Ks = 0.4942)

Cbx5 ENSRNOG00000036841 (Rat)

Gene Details

chromobox homolog 5 (Cbx5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052163, Rat)

Protein Percentage 97.91%
CDS Percentage 90.4%
Ka/Ks Ratio 0.01466 (Ka = 0.0093, Ks = 0.6369)

Genome Location

Sequence Coding sequence

Length: 576 bp    Location: 2296901..2280005   Strand: -
>XM_004872789.1
ATGGGAAAGAAAACCAAGAGGACAGCTGACAGTTCTTCTTCAGAGGATGAGGAGGAGTATGTTGTGGAGAAAGTGTTAGACAGGCGTGTGGTGAAGGGGCAAGTGGAGTATCTGCTAAAGTGGAAAGGCTTTTCCGAGGAACATAATACTTGGGAACCAGAGAAAAACTTGGATTGCCCTGAACTAATTTCTGAGTTTATGAAAAAGTATAAGAAGATGAAGGAGGGTGAAAATAATAAACCCAGGGAGAAGTCAGAAAGTAATAAGAGGAAATCCAATTTCTCGAACAGTGCTGATGATATCAAGTCGAAAAAAAAGAGAGAGCAAAGCAATGATATTGCTCGGGGCTTTGAGAGAGGGCTGGAACCAGAAAAGATTATCGGAGCAACAGATTCCTGTGGTGATTTAATGTTCCTGATGAAATGGAAAGACACGGATGAGGCTGACCTGGTTCTTGCAAAAGAAGCTAATGTGAAATGTCCGCAAATTGTGATAGCATTTTATGAAGAGAGACTGACGTGGCATGCATATCCTGAGGATGCGGAAAACAAAGAGAAAGAAACCGCAAAAAGCTAA

Related Sequences

XP_004872846.1 Protein

Cbx5 PREDICTED: chromobox protein homolog 5 isoform X3 [Heterocephalus glaber]

Length: 191 aa      View alignments
>XP_004872846.1
MGKKTKRTADSSSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETAKS