Details from NCBI annotation

Gene Symbol Hoxc5
Gene Name homeobox C5
Entrez Gene ID 101708911

Database interlinks

Part of NW_004624904.1 (Scaffold)

For more information consult the page for NW_004624904.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXC5 ENSCPOG00000009447 (Guinea pig)

Gene Details

homeobox C5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008481, Guinea pig)

Protein Percentage 99.55%
CDS Percentage 98.2%
Ka/Ks Ratio 0.02678 (Ka = 0.002, Ks = 0.0744)

Hoxc5 ENSMUSG00000022485 (Mouse)

Gene Details

homeobox C5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001709, Mouse)

Protein Percentage 99.55%
CDS Percentage 97.6%
Ka/Ks Ratio 0.02009 (Ka = 0.002, Ks = 0.1003)

Hoxc5 ENSRNOG00000016598 (Rat)

Gene Details

homeo box C5 (Hoxc5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022247, Rat)

Protein Percentage 99.55%
CDS Percentage 97.6%
Ka/Ks Ratio 0.01983 (Ka = 0.002, Ks = 0.1013)

Genome Location

Sequence Coding sequence

Length: 669 bp    Location: 2086531..2090158   Strand: +
>XM_004872782.1
ATGAGCTCCTACGTAGCCAATTCATTCTATAAGCAGAGCCCCAATATCCCTGCCTATAACATGCAAACTTGTGGGAACTATGGATCGGCCTCAGAGGTGCAGGCATCCAGGTACTGCTACGGCGGATTGGATTTAAGCATCACTTTCCCACCGCCTGCGCCTTCCAACTCTCTCCACGGGGTAGACATGGCTGCCAACCCCCGGGCTCACCCCGACCGCCCCGCCTGCAGCGCCGCGGCCGCTCCGGGACACGCTCTGGGCAGAGACGAAGCGGCTCCTCTCAACCCCGGGATGTACAGTCAGAAGGCAGCTCGCCCGGCGCTGGAGGAGCGAGCTAAGAGCAGAGGGGAGATCAAAGAGGAGCAGGCGCAGACAGGGCAGCCCGCCGGACTGAGCCAGCCACCGGCCCCGCCACAGATTTACCCGTGGATGACCAAACTGCACATGAGCCACGAGACGGACGGCAAGCGGTCCCGAACCAGTTACACGCGCTACCAGACTCTGGAACTGGAGAAAGAATTCCACTTTAATCGCTACCTCACTCGCCGCAGGCGCATAGAGATCGCCAACAATTTATGTCTCAACGAGAGACAGATCAAGATCTGGTTCCAGAACCGCAGGATGAAGTGGAAGAAAGATTCCAAAATGAAAAGCAAAGAGGCTCTTTAG

Related Sequences

XP_004872839.1 Protein

Hoxc5 PREDICTED: homeobox protein Hox-C5 [Heterocephalus glaber]

Length: 222 aa      View alignments
>XP_004872839.1
MSSYVANSFYKQSPNIPAYNMQTCGNYGSASEVQASRYCYGGLDLSITFPPPAPSNSLHGVDMAANPRAHPDRPACSAAAAPGHALGRDEAAPLNPGMYSQKAARPALEERAKSRGEIKEEQAQTGQPAGLSQPPAPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEAL