Details from NCBI annotation

Gene Symbol Hoxc6
Gene Name homeobox C6
Entrez Gene ID 101708557

Database interlinks

Part of NW_004624904.1 (Scaffold)

For more information consult the page for NW_004624904.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXC6 ENSCPOG00000009444 (Guinea pig)

Gene Details

homeobox C6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008478, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 98.44%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0788)

HOXC6 ENSG00000197757 (Human)

Gene Details

homeobox C6

External Links

Gene Match (Ensembl Protein ID: ENSP00000243108, Human)

Protein Percentage 99.57%
CDS Percentage 98.44%
Ka/Ks Ratio 0.02246 (Ka = 0.0018, Ks = 0.0793)

Hoxc6 ENSMUSG00000001661 (Mouse)

Gene Details

homeobox C6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001711, Mouse)

Protein Percentage 99.57%
CDS Percentage 97.3%
Ka/Ks Ratio 0.01144 (Ka = 0.0018, Ks = 0.154)

Hoxc6 ENSRNOG00000016442 (Rat)

Gene Details

Homeo box C6; Protein Hoxc6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022217, Rat)

Protein Percentage 99.57%
CDS Percentage 96.88%
Ka/Ks Ratio 0.01113 (Ka = 0.0018, Ks = 0.1626)

Genome Location

Sequence Coding sequence

Length: 708 bp    Location: 2079702..2084540   Strand: +
>XM_004872781.1
ATGAATTCCTACTTCACTAACCCTTCCTTATCCTGCCACCTCGCCGGGGGCCAGGACGTCCTCCCCAACGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCTATGGAGCAGCCGTTGCCCAGAACCGGATCTACTCGACTCCCTTTTATTCGCCACAGGAGAATGTCGTGTTCAGTTCCAGCCGGGGGCCGTATGACTATGGATCTAATTCCTTTTACCAGGAGAAAGACATGCTCTCAAACTGCAGACAAAACACCTTAGGACATAACACACAGACCTCAATCGCTCAGGATTTTAGTTCTGAGCAGGGCAGGACTGCGCCCCAGGACCAGAAAGCCAGTATCCAGATTTACCCCTGGATGCAGCGAATGAATTCGCACAGTGGGGTTGGCTACGGAGCGGACCGGAGGCGCGGCCGCCAGATCTACTCTCGGTACCAGACCCTGGAACTGGAGAAGGAATTTCACTTCAATCGCTACCTAACGCGGCGCCGGCGCATCGAGATCGCCAACGCACTCTGCCTGACCGAGCGACAGATCAAAATCTGGTTCCAGAACCGCCGGATGAAGTGGAAAAAAGAATCTAATCTCACCTCCACACTCTCGGGGGGTGGCGGAGGTGCCGCCGCCGACAGCCTTGGCGGAAAAGAGGAAAAGCGGGAAGAGACAGAAGAGGAGAAGCAGAAAGAGTGA

Related Sequences

XP_004872838.1 Protein

Hoxc6 PREDICTED: homeobox protein Hox-C6 [Heterocephalus glaber]

Length: 235 aa      View alignments
>XP_004872838.1
MNSYFTNPSLSCHLAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVFSSSRGPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAADSLGGKEEKREETEEEKQKE