Details from NCBI annotation

Gene Symbol Hoxc12
Gene Name homeobox C12
Entrez Gene ID 101706765

Database interlinks

Part of NW_004624904.1 (Scaffold)

For more information consult the page for NW_004624904.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXC12 ENSCPOG00000026314 (Guinea pig)

Gene Details

homeobox C12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020832, Guinea pig)

Protein Percentage 98.21%
CDS Percentage 96.18%
Ka/Ks Ratio 0.04277 (Ka = 0.0076, Ks = 0.178)

HOXC12 ENSG00000123407 (Human)

Gene Details

homeobox C12

External Links

Gene Match (Ensembl Protein ID: ENSP00000243103, Human)

Protein Percentage 97.13%
CDS Percentage 93.67%
Ka/Ks Ratio 0.03719 (Ka = 0.0122, Ks = 0.3284)

Hoxc12 ENSMUSG00000050328 (Mouse)

Gene Details

homeobox C12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051003, Mouse)

Protein Percentage 96.77%
CDS Percentage 90.68%
Ka/Ks Ratio 0.03549 (Ka = 0.0174, Ks = 0.4898)

Hoxc12 ENSRNOG00000016116 (Rat)

Gene Details

homeo box C12 (Hoxc12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021580, Rat)

Protein Percentage 97.13%
CDS Percentage 91.04%
Ka/Ks Ratio 0.03821 (Ka = 0.0174, Ks = 0.4553)

Genome Location

Sequence Coding sequence

Length: 840 bp    Location: 2010025..2011606   Strand: +
>XM_004872776.1
ATGGGCGAGCATAATCTCCTGAATCCTGGGTTTGTGGGGCCGCTGGTGAATATCCACACGGGAGACACCTTCTACTTCCCCAACTTCCGCGCGTCCGGGGCGCAACTCCCCGGGCTGCCTTCGCTGTCCTATCCACGCCGTGACAACGTGTGCTCGCTGCCCTGGCCTTCGGCTGAGCCGTGCAATGGCTACCCGCAGCCCTACCTCGGCAGCCCAGTGTCACTCAACCCGCCCTTCGGCCGCACGTGCGAGCTGGCACGCGTGGAGGACAGCAAGAGTTACTACCGCGAGCCGTGCGCTGAAGGCGGCGGGGGCCTGAAGCGCGAGGAGCGCGGGCGCGACCCTGGAACCGGGCCAGGGGCAGCGCTGCTGCCGCTGGAGCCGTCGGGGCCGCCTGCGCTCGGCTTCAAATACGACTACACAGCAGGAGGGGGGGGTGGCGACGGCGGCACCGGACCCCCACACGACCCACCCTCGTGTCAGTCGCTGGAATCCGACTCCAGTTCGTCCCTACTCAACGAGGGCAACAAGGGCGCCGGCACAGGCGACCCGGGCAGCTTGGTATCGCCTTTGAACCCCGGCGGCGGACTCTCGGCCAGCGGCGCGCCCTGGTACCCGATCCACAGCCGTTCACGGAAGAAGCGCAAGCCCTATTCGAAGTTGCAGCTGGCGGAGCTGGAGGGCGAGTTTCTGGTCAACGAGTTCATCACACGCCAACGCCGGAGGGAACTCTCGGACCGCTTGAATCTTAGTGACCAGCAGGTCAAGATCTGGTTTCAGAATCGGAGAATGAAAAAGAAAAGACTTCTGTTGAGGGAGCAAGCTCTCTCCTTCTTTTAG

Related Sequences

XP_004872833.1 Protein

Hoxc12 PREDICTED: homeobox protein Hox-C12 [Heterocephalus glaber]

Length: 279 aa      View alignments
>XP_004872833.1
MGEHNLLNPGFVGPLVNIHTGDTFYFPNFRASGAQLPGLPSLSYPRRDNVCSLPWPSAEPCNGYPQPYLGSPVSLNPPFGRTCELARVEDSKSYYREPCAEGGGGLKREERGRDPGTGPGAALLPLEPSGPPALGFKYDYTAGGGGGDGGTGPPHDPPSCQSLESDSSSSLLNEGNKGAGTGDPGSLVSPLNPGGGLSASGAPWYPIHSRSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF