Details from NCBI annotation

Gene Symbol Calcoco1
Gene Name calcium binding and coiled-coil domain 1, transcript variant X2
Entrez Gene ID 101705553

Database interlinks

Part of NW_004624904.1 (Scaffold)

For more information consult the page for NW_004624904.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CALCOCO1 ENSCPOG00000021587 (Guinea pig)

Gene Details

calcium binding and coiled-coil domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020322, Guinea pig)

Protein Percentage 94.07%
CDS Percentage 93.39%
Ka/Ks Ratio 0.14017 (Ka = 0.0287, Ks = 0.2049)

CALCOCO1 ENSG00000012822 (Human)

Gene Details

calcium binding and coiled-coil domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000449960, Human)

Protein Percentage 91.61%
CDS Percentage 90.21%
Ka/Ks Ratio 0.13703 (Ka = 0.0446, Ks = 0.3252)

Calcoco1 ENSMUSG00000023055 (Mouse)

Gene Details

calcium binding and coiled coil domain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023818, Mouse)

Protein Percentage 88.13%
CDS Percentage 86.16%
Ka/Ks Ratio 0.10559 (Ka = 0.0624, Ks = 0.5905)

Genome Location

Sequence Coding sequence

Length: 2295 bp    Location: 1807168..1792861   Strand: -
>XM_004872773.1
ATGGAAGAATCATCACTAAGCCGGGCACGGTCCCGGGGTGGAGTCAGCTTTCTGAATGTAGCCCGGACCTACATCCCCAACACCAAGGTGGAATGTCACTACACCCTCCCCCCAGGCACTATGCCTAGTGCCAGTGACTGGATTGGCATCTTCAAGGTGGAGGCTGCCTGTGTTCGGGATTACCACACATTTGTGTGGTCATCAGTCCCTGAAAGTACAACTGATGGTTCCCCTATCCACGCCAGTGTCCAGTTCCAAGCCAGCTACCTGCCCAAACCTGGAGCACAGCTCTACCAGTTTCGATACGTGAACCGCCAGGGTAGGGTATGTGGGCAGAGCCCTCCCTTCCAGTTCCGAGAGCCGAGGCCCATGGATGAGCTGGTGACCCTGGAGGAGACTGATGGTGGCTCTGACATCTTGCTGGTTGTCCCCAAGGCCACTGTGCTGCAGAACCAGCTGGATGAGAGCCAGCAAGAGCGGAATGACCTGATGCAGCTGAAGCTACAGCTGGAGGAGCAGGTGACAGAGCTGAGGAGCCGAGTGCAAGAGCTTGAGACAGCTCTGGCAACCGCCAGGCAGGAGCATGCAGAGCTGACAGAGCAGTATAAGGGGCTTTCCCGGGCGCATGGGGAGCTCTCAGAAGAGAGGGATATCCTGAGCCGACAGCAGGGAGATCATGTGGCACGCATCTTGGAGCTGGAGCATGACATCCAGACCATCAGTGAGAAAGTGCTGACAAAGGAGGTGGATCTGGACAGGGTTAGAGACACAGTGAAGGCCTTGACTCGGGAACAGGAGAATCTGCTGGGACAGCTGAAGGAAGTCCAAGGAGACAAGGAGCAAAGCGAGGCTGAGCTCCAAGCGGCACAACAGGAGAACCATCGCTTAAATTTGGAGCTGCAGGAGGCCAAGGGCCGGCAAGAGGAGAACAGTGTTCAGGCCCAGCGATTGAAGGACAAGGTGGCCCAGATGAAGGACAGTCTAGGCCAGGCCCAACAGCGAGTGGCTGAGCTGGAGCCTCTGAAGGAGCAACTTCGAGGGGCCCAGGAGCTCGCAGCCTCAAGCCAGCAAAAAGCCACCCTTCTTGGGGAGGAATTGGCCAGCGCAGCAGGAGCCAGGGATCGCACCATAGCCGAGCTGCACCGCAGCCGCCTGGAAGTGGCTGAGGTTAACGGCAGGCTGGCTGAGCTCACTCTGCATCTGAAGGAGGAAAAATGCCAGTGGAGCAAGGAGCGGGCTGGGCTGTTGCAGAATATGGAGGCAGAGAAGGACAAGATCCTGAAGCTCAGTGCAGAGATCCTTCGGCTAGAGAAGACAGTGCAGGAGGAGAGGACCCAGAACCAAGTGTTCAAGACAGAACTGGCCCGGGAAAAGGATTCCAGCCTGGTACAGTTGTCAGAGAGTAAGCGGGAGCTGACAGAGCTGCGGTCAGCCCTGCGCGTGCTTCAGAAGGAAAAGGAGCAGTTGCAGGCTGAGAAGCAGGAGCTGCTAGAGTACATGAGGAAGCTGGAGGCCCGCCTGGAAAAGGTGGCAGATGAGAAGTGGAATGAGGATGCCGCCACAGAGGATGAGGAGGCCACAGCAGGGCTGAGTCTGTACACCCCTAGTCTTGTGACACTTCTCCCCCACCCATTCCTCCTGTTGAGGAAAATTCCATGGACACCCGTGGAAGCTGCCTCTGCCTTATATGTGTTTGTTCTTTTTCCTTCCCAGACCCTGGGCCCTGTGTACCCCTCAGAGGAGACTGAGCTGATGGAGCGCTCTAACAGACACATCCTTCTTTCTTCTTTGCCTGCTTTCTTTCTCACAGGCTGCCCAACGGCTCTAACAGACTCGGAGGACGAGTCCCCAGAAGACATGAGACTCCCACCCTATGGCCTGTGTGAGCGTGGAGACCTAAACTCCTCTCCTCCTGGGCGCCGAGAGGCTTCTCCTCTCGTTGTCATCAGTCAGCCAGCTCCCATTGCTTCCCACGTCTCAGGGCCAGCTGAAGACAGCAGCTCTGACTCGGAGGCTGAGGATGAGAAATCAGTTCTGATGGCAGCTGTGCAGAGCGGGGGTGAGGAGGCCAATCTGCTGCTTCCTGAACTAGGCCCTGCCTTCTATGACATGGCCAGTGGCTTTTCCATGGATCCCCTGTTGGAAACCAGCACTGAGGGCCCTGCCACTCCACTATGGAAGGAATGTCCTATCTGTAAAGAGCGCTTCCCTGCTGGGAGCAACAAGGGTGCCCTGGAGGACCACATGGACAGACACTTCTTTTGCAGCACCCAGGACCCCTTCACCTTTGAGTGA

Related Sequences

XP_004872830.1 Protein

Calcoco1 PREDICTED: calcium-binding and coiled-coil domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 764 aa     
>XP_004872830.1
MEESSLSRARSRGGVSFLNVARTYIPNTKVECHYTLPPGTMPSASDWIGIFKVEAACVRDYHTFVWSSVPESTTDGSPIHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFREPRPMDELVTLEETDGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEEQVTELRSRVQELETALATARQEHAELTEQYKGLSRAHGELSEERDILSRQQGDHVARILELEHDIQTISEKVLTKEVDLDRVRDTVKALTREQENLLGQLKEVQGDKEQSEAELQAAQQENHRLNLELQEAKGRQEENSVQAQRLKDKVAQMKDSLGQAQQRVAELEPLKEQLRGAQELAASSQQKATLLGEELASAAGARDRTIAELHRSRLEVAEVNGRLAELTLHLKEEKCQWSKERAGLLQNMEAEKDKILKLSAEILRLEKTVQEERTQNQVFKTELAREKDSSLVQLSESKRELTELRSALRVLQKEKEQLQAEKQELLEYMRKLEARLEKVADEKWNEDAATEDEEATAGLSLYTPSLVTLLPHPFLLLRKIPWTPVEAASALYVFVLFPSQTLGPVYPSEETELMERSNRHILLSSLPAFFLTGCPTALTDSEDESPEDMRLPPYGLCERGDLNSSPPGRREASPLVVISQPAPIASHVSGPAEDSSSDSEAEDEKSVLMAAVQSGGEEANLLLPELGPAFYDMASGFSMDPLLETSTEGPATPLWKECPICKERFPAGSNKGALEDHMDRHFFCSTQDPFTFE