Details from NCBI annotation

Gene Symbol Tarbp2
Gene Name TAR (HIV-1) RNA binding protein 2, transcript variant X2
Entrez Gene ID 101701286

Database interlinks

Part of NW_004624904.1 (Scaffold)

For more information consult the page for NW_004624904.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TARBP2 ENSCPOG00000001009 (Guinea pig)

Gene Details

TAR (HIV-1) RNA binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000908, Guinea pig)

Protein Percentage 95.63%
CDS Percentage 93.35%
Ka/Ks Ratio 0.10253 (Ka = 0.0224, Ks = 0.2185)

TARBP2 ENSG00000139546 (Human)

Gene Details

TAR (HIV-1) RNA binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000266987, Human)

Protein Percentage 93.99%
CDS Percentage 91.8%
Ka/Ks Ratio 0.12193 (Ka = 0.032, Ks = 0.2627)

Tarbp2 ENSMUSG00000023051 (Mouse)

Gene Details

TAR (HIV) RNA binding protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023813, Mouse)

Protein Percentage 92.05%
CDS Percentage 89.95%
Ka/Ks Ratio 0.12565 (Ka = 0.0414, Ks = 0.3294)

Tarbp2 ENSRNOG00000042355 (Rat)

Gene Details

TAR (HIV-1) RNA binding protein 2 (Tarbp2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061329, Rat)

Protein Percentage 91.23%
CDS Percentage 89.13%
Ka/Ks Ratio 0.11714 (Ka = 0.0446, Ks = 0.3807)

Genome Location

Sequence Coding sequence

Length: 1101 bp    Location: 1597467..1603491   Strand: +
>XM_004872757.1
ATGAGTGAAGAGGAGCAGGGCTCCGGCACTACCACGGGCTGCGGGCTGCCCAGTATAGAGCAAATGCTGGCCGCCAACCCGGGCAAGACCCCGATCAGCCTTCTGCAGGAGTATGGGACCAGAATAGGGAAGACGCCCGTGTACGACCTTCTCAAAGCCGAGGGCCAAGCCCACCAACCTAATTTCACCTTTCGGGTCACCGTTGGCGACACCAGCTGCACTGGTCAGGGCCCCAGCAAGAAGGCAGCCAAGCACAAGGCAGCTGAGGTGGCCCTCAAACACCTCAAAGGGGGGAGCATGCTGGAGCCGGCCCTGGAGGACAGCAGTTCTTTTTCTCCCCCAGACTCTTCACTGCTTGAGGACGCTCCAGTTTTTACCACTGTGGCAGTTGCTGCTCCTGTTCCATCTGCTGTCCTAACGAGGTGTCCCCCCATGGAGCTGCAGCCCCCTGTCTCCCCTCAGCAGTCTGAGTGTAACCCTGTTGGTGCTCTGCAGGAGCTGGTGGTGCAGAAGGGCTGGCGGTTGCCAGAATACACGGTGACCCAGGAGTCTGGACCAGCCCACCGCAAAGAGTTCACCATGACCTGCAGAGTGGAGCGTTTCATTGAGATTGGTAGTGGCACTTCCAAAAAGCTGGCAAAACGTAATGCGGCAGCTAAGATGCTGCTTCGAGTGCACACAGTGCCTCTGGATGCCCGGGATGGCAATGAGGCAGAGCCTGATGATGATCACTTCTCCATTGGTGTGGGCTCCCGCCTGGATGGACTTCGGAGCCGGGGCCCAGGCTGCACATGGGATTCTCTGCGAAATTCAGAGGGAGAGAAGATTCTGCACCTTCGAAATTGCTCTCCAGGCTCCCTAGGTGCTCTGGGCTCTACCAGCTGCAGCATGCTCAGTGAGCTCTCAGAGGAGCAGGCCTTCCATGTCAGCTACCTGGATATTGAGGAGCTGAGCATGAGTGGGCTCTGCCAGTGCCTAGTGGAACTTTCCACCCAGCCAGCTACTGTGTGTCACGGCTCTGCAACTACTAGGGAGGAAGCTCGAGGGGAGGCTGCTCGCCGTGCCCTGCAGTACCTCAAGATCATGGCAGGCAGCAAGTAG

Related Sequences

XP_004872814.1 Protein

Tarbp2 PREDICTED: RISC-loading complex subunit TARBP2 isoform X2 [Heterocephalus glaber]

Length: 366 aa      View alignments
>XP_004872814.1
MSEEEQGSGTTTGCGLPSIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAAEVALKHLKGGSMLEPALEDSSSFSPPDSSLLEDAPVFTTVAVAAPVPSAVLTRCPPMELQPPVSPQQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHTVPLDARDGNEAEPDDDHFSIGVGSRLDGLRSRGPGCTWDSLRNSEGEKILHLRNCSPGSLGALGSTSCSMLSELSEEQAFHVSYLDIEELSMSGLCQCLVELSTQPATVCHGSATTREEARGEAARRALQYLKIMAGSK