Details from NCBI annotation

Gene Symbol Tspan6
Gene Name tetraspanin 6
Entrez Gene ID 101721505

Database interlinks

Part of NW_004624902.1 (Scaffold)

For more information consult the page for NW_004624902.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSPAN6 ENSCPOG00000005110 (Guinea pig)

Gene Details

tetraspanin 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004597, Guinea pig)

Protein Percentage 93.88%
CDS Percentage 95.51%
Ka/Ks Ratio 0.47702 (Ka = 0.0367, Ks = 0.0769)

TSPAN6 ENSG00000000003 (Human)

Gene Details

tetraspanin 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000362111, Human)

Protein Percentage 92.24%
CDS Percentage 92.11%
Ka/Ks Ratio 0.1966 (Ka = 0.0434, Ks = 0.2207)

Tspan6 ENSMUSG00000067377 (Mouse)

Gene Details

tetraspanin 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084838, Mouse)

Protein Percentage 89.39%
CDS Percentage 87.62%
Ka/Ks Ratio 0.11802 (Ka = 0.0543, Ks = 0.46)

Tspan6 ENSRNOG00000003786 (Rat)

Gene Details

tetraspanin 6 (Tspan6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005165, Rat)

Protein Percentage 88.98%
CDS Percentage 87.89%
Ka/Ks Ratio 0.13378 (Ka = 0.0566, Ks = 0.4232)

Genome Location

Sequence Coding sequence

Length: 738 bp    Location: 1978649..1983538   Strand: +
>XM_004872590.1
ATGGCGTCCCCTTCTCGGAGACTGCAGACTAAACCAGTCATTACTTGTCTCAAGAGCCTTCTCTTGATCTACACCTTCATCTTTTGGATCACTGGCATAATCCTTCTTGCTGTGGGCATTTGGGGCAAGGTGAGCCTGGGAAATTATTTTTCCCTTTTAAATGAGAAGGCCACCAACGTCCCCTTTGTGCTCATTGCCACCGGCACTGTCATTATTCTTTTGGGCACCTTTGGTTGTTTTGCTACCTGCCAAGCTTCTGCATGGATGCTAAAACTGTATGCAATGTTTCTGATTCTCATTTTTTTGGTTGAACTGGTTGCTGCCATTGTAGGATTTATTTTCAGACATGAGATTAAGAACAGCTTTAAGAATAATTATGAGAAGGCTTTGAAACAGTATAACTCTACAGGAGATTATAGAAGCGAAGCAGTAGACAAGATCCAAAATATGTTGCATTGTTGCGGTGTCACTGATTATAGAAATTGGGAAGATACTAATTATTACTCAGAAGCAGGATTTCCCAAGAGTTGTTGTAAACTTGAAGATTGTTCACCACAGAGAGATGCAGATAAAATCAACCATGAAGGTTGTTTTTTAAAGGTGATGGCCATTATTGAGTCAGAAATGGGAGTTGTTGCAGGAATTTCCTTTGGAGTTGCTTGCTTCCAGCTAATTGGAATCTTTCTAGCCTACTGCCTCTCTCATGCCATAACAAATAACCAGTATGAGATAGTGTAA

Related Sequences

XP_004872647.1 Protein

Tspan6 PREDICTED: tetraspanin-6 [Heterocephalus glaber]

Length: 245 aa      View alignments
>XP_004872647.1
MASPSRRLQTKPVITCLKSLLLIYTFIFWITGIILLAVGIWGKVSLGNYFSLLNEKATNVPFVLIATGTVIILLGTFGCFATCQASAWMLKLYAMFLILIFLVELVAAIVGFIFRHEIKNSFKNNYEKALKQYNSTGDYRSEAVDKIQNMLHCCGVTDYRNWEDTNYYSEAGFPKSCCKLEDCSPQRDADKINHEGCFLKVMAIIESEMGVVAGISFGVACFQLIGIFLAYCLSHAITNNQYEIV