Details from NCBI annotation

Gene Symbol Pglyrp2
Gene Name peptidoglycan recognition protein 2, transcript variant X3
Entrez Gene ID 101725687

Database interlinks

Part of NW_004624901.1 (Scaffold)

For more information consult the page for NW_004624901.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PGLYRP2 ENSCPOG00000024218 (Guinea pig)

Gene Details

peptidoglycan recognition protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018308, Guinea pig)

Protein Percentage 76.31%
CDS Percentage 82.85%
Ka/Ks Ratio 0.29975 (Ka = 0.1399, Ks = 0.4667)

PGLYRP2 ENSG00000161031 (Human)

Gene Details

peptidoglycan recognition protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000345968, Human)

Protein Percentage 69.73%
CDS Percentage 78.67%
Ka/Ks Ratio 0.36832 (Ka = 0.1966, Ks = 0.5338)

Pglyrp2 ENSMUSG00000079563 (Mouse)

Gene Details

peptidoglycan recognition protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000129964, Mouse)

Protein Percentage 68.45%
CDS Percentage 76.29%
Ka/Ks Ratio 0.34687 (Ka = 0.2162, Ks = 0.6232)

Pglyrp2 ENSRNOG00000042318 (Rat)

Gene Details

Protein LOC299567

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064165, Rat)

Protein Percentage 64.77%
CDS Percentage 73.79%
Ka/Ks Ratio 0.37927 (Ka = 0.2508, Ks = 0.6614)

Genome Location

Sequence Coding sequence

Length: 1575 bp    Location: 2561354..2554313   Strand: -
>XM_004872533.1
ATGATGAGACCCCACAGTGTCCTCTGGATCCTGCTTGGATTGCTGCTGTGCCCAGAGCCCGGGACAGCCTCCTTGCCTCTGCTCATGGACTCCGTCATCCAGGCCCTGGCTGAGCTCGAGCAGAAGGTGCCAGGGACTGGGGCCAACCAAAGTGCCTCTGCATGGCTTCTATCAGCCCAGAGCTCTGGGCCCCGCCATCCCCTCCACCACCTCCTGCTGGAGGCACCAAGTCTCAAGATCACCGAGCTGGAGCCGCCACCCCTGAACCCAGAGCTTCAAGACCTGGTTGAGAAGGTGGTCCGACATGATGTACAGGACGGGCGGGAGTACGGGGTGGTGCTGGCACCCGATGGCTCCACTGTGGCTGTGAAGCCTCTGCTGGTGGGACTGACAGCCGGGCTACAAGTGCACAAGGTTTCAACCTTAACCTTGTCCTCTGAGAGCCCGGCCACCCCTCAAGATGCTGAAGCCACCTCCCCAGGGCCCACGGGTGCTTCTCCAGTTATCACCCCTACAGATGCCAGAGCCACCCTACCAAAAGGCAAAGCCGAACTGCTCACTGCTAGGGACAGCTTCCTGACCATCACCCTCGCTGCAGATCTGGGCCTAACCTTCCTCCAGGGCTCCCAGGACAAGAACCTCCCAAGCCTGGGAACTGATGGCTGCTGGGACCAGCTCTCTGTCCCCCAGAAATTCATGCTGCTGGACTCCAAGGTGTCCGTGCTGACCATGGCCTTCCTCAATGGCGCCCTGGATGGGGCTCTCCTTGGAGACTACCTAAGCAGGGTCCCTGAGCCCCGACCACTCCTCAGCCGCCTGCTGAGGGAGTACTATGGAGCAGGGGTGGCTGGAGACCCTGAGTTCCGCAGCAACTTCCGGCGGCAGAAGGGGGCTGCTCTGACCTCAGCCTCCACCCTGGCCCAGCAGGTGTTGGGGGCTCTTGTGCTCCTACAGGGTGTGGAGCCAGGACCGCCACAGCTGCAGAATATCAGCCAAGAACAGCTGGCCCAGGTGGCTGCCCACGCTGCCAGGGAGTTCACGAAGGATTTCCTGGGATGCCCAGCCATCCACCCCCGCTGCCGCTGGGAAGCCGCGCCCTACCGGGGCCTCCCGATACCACTGAAGCTGCCGCTCAGGTTCTTGTATGTGCATCACACCTCTGTGCCGGCTTCACCGTGCACCACCTTCGAGCGCTGCGCCGCCAACATGCGCTCCATCCAGCGTTTTCACCAGGACCATCGAGGCTGGGATGACATCGGCTACAGTTTCGTGGTGGGCTCTGAGGGCTACGTGTACGAGGGCCGCGGCTGGCACTGGGTGGGCGCGCACACGCGCAGACACAACTCCCGCGGCTTCGGCGTGGCCATCGTGGGCGACTACACCAAGACATTGCCCAGCAAGGCCGCGCTGCACATTGTGCGCGACATGCTCCCTGGCTGCGCAGTGCGAGCCGGCCACCTACGGCGCGACTACCAGGTGCTGGGCCACCGCCAGCTGGTGAAAACCGACTGTCCTGGCGAAGCGCTCTTCCACCAGCTGCGCACTTGGCCGCGCTTCTCGGAGACTGGAAACTAA

Related Sequences

XP_004872590.1 Protein

Pglyrp2 PREDICTED: N-acetylmuramoyl-L-alanine amidase isoform X3 [Heterocephalus glaber]

Length: 524 aa      View alignments
>XP_004872590.1
MMRPHSVLWILLGLLLCPEPGTASLPLLMDSVIQALAELEQKVPGTGANQSASAWLLSAQSSGPRHPLHHLLLEAPSLKITELEPPPLNPELQDLVEKVVRHDVQDGREYGVVLAPDGSTVAVKPLLVGLTAGLQVHKVSTLTLSSESPATPQDAEATSPGPTGASPVITPTDARATLPKGKAELLTARDSFLTITLAADLGLTFLQGSQDKNLPSLGTDGCWDQLSVPQKFMLLDSKVSVLTMAFLNGALDGALLGDYLSRVPEPRPLLSRLLREYYGAGVAGDPEFRSNFRRQKGAALTSASTLAQQVLGALVLLQGVEPGPPQLQNISQEQLAQVAAHAAREFTKDFLGCPAIHPRCRWEAAPYRGLPIPLKLPLRFLYVHHTSVPASPCTTFERCAANMRSIQRFHQDHRGWDDIGYSFVVGSEGYVYEGRGWHWVGAHTRRHNSRGFGVAIVGDYTKTLPSKAALHIVRDMLPGCAVRAGHLRRDYQVLGHRQLVKTDCPGEALFHQLRTWPRFSETGN