Details from NCBI annotation

Gene Symbol Slc1a6
Gene Name solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6, transcript variant X2
Entrez Gene ID 101718705

Database interlinks

Part of NW_004624901.1 (Scaffold)

For more information consult the page for NW_004624901.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC1A6 ENSCPOG00000002093 (Guinea pig)

Gene Details

solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001896, Guinea pig)

Protein Percentage 96.63%
CDS Percentage 90.07%
Ka/Ks Ratio 0.0245 (Ka = 0.0165, Ks = 0.6751)

SLC1A6 ENSG00000105143 (Human)

Gene Details

solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000221742, Human)

Protein Percentage 96.45%
CDS Percentage 90.48%
Ka/Ks Ratio 0.03275 (Ka = 0.0176, Ks = 0.537)

Slc1a6 ENSMUSG00000005357 (Mouse)

Gene Details

solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005490, Mouse)

Protein Percentage 95.72%
CDS Percentage 88.83%
Ka/Ks Ratio 0.03777 (Ka = 0.0211, Ks = 0.5591)

Slc1a6 ENSRNOG00000007509 (Rat)

Gene Details

excitatory amino acid transporter 4

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009931, Rat)

Protein Percentage 93.75%
CDS Percentage 86.49%
Ka/Ks Ratio 0.05134 (Ka = 0.0352, Ks = 0.6857)

Genome Location

Sequence Coding sequence

Length: 1695 bp    Location: 2042471..2019474   Strand: -
>XM_004872511.1
ATGAGCAGCCACGGCAACAGTCTGTTCCTGCGGGAGAGCGGCCAGCGCCTGGGTCGGACCGGCTGGCTGCAGCGGCTGCGAGACAGTTTGCAGCAGAGGGCGCTGCGCACGCGCCTGCGCCTGCAGACCCTGACCCGCGAGCGCGTGCTGCGCTTCCTGCGCCGCAATGCTTTCATCCTGCTCACCGTCAGCGCTGTGGTCATTGGTGTCAGTCTGGCCTTTGCCTTGCGCCCGTACCAGCTCACTTACCGGCAGATCAAGTACTTCTCTTTTCCTGGTGAGCTTCTCATGAGGATGTTGCAGATGCTGGTGCTGCCCCTCATTGTCTCCAGCCTGGTCACAGGTATGGCATCCCTGGACAACAAGGCAACAGGGCGCATGGGGATGCGGGCAGCTGTGTACTACATGGTGACTACAGTCATTGCGGTCTTCATCGGCATCCTCATGGTCACCATCATACATCCTGGAAAGGGCTCCAAGGAGGGGCTGCACCGCGAGGGTCGAATCGAGACCATCCCCACAGCTGACGCCTTCATGGACCTGGTCAGAAATATGTTCCCACCCAACCTTGTGGAGGCCTGCTTCAAACAGTTCAAGACGCAGTACAGCACAAGGGTGGTGACCAGGACCATCGTGAGGACAGAGAACGGGTCTGAGCTGGGTGCCTCCATGCCTCCTCCCTCGTCAGTGGAGAACGAAACCAGCTTTCTGGAAAATGTCACTCGGGCCTTGGGCACCCTGCAGGAGGTGCTGAGCTTTGAGGAGACTGTTCCTGTGCCTGGATCTGCCAATGGCATCAATGCCCTGGGCCTTGTGGTCTTCTCTGTGGCCTTCGGGCTGGTCATTGGTGGCATGAAACACAAGGGACGAGTCCTGAGGGACTTCTTCGACAGCCTCAATGAGGCTATTATGAGGCTGGTGGGCATCATTATCTGGTATGCGCCCGTGGGTATCCTGTTCTTGATTGCTGGGAAGATTCTGGAAATGGAAGATATGGCTGTCCTTGGAGGCCAGCTGGGGATGTACACACTGACTGTCATTGTGGGCTTGTTCCTCCATGCCGGTGGTGTCTTGCCCCTCATCTACTTCCTCATCACCCACCGGAACCCCTTCCCCTTCATCGGGGGCTTGCTGCAGGCGCTCATCACTGCCATGGGCACGTCTTCCAGCTCTGCAACTCTGCCCATCACCTTCCGCTGCCTGGAGGAGTGCCTGGGTGTGGACCGACGCATCACCAGGTTTGTGCTGCCCGTGGGGGCCACTGTCAACATGGATGGCACTGCACTGTACGAGGCCTTGGCTGCCATCTTTATTGCTCAAGTCAATAATTATGAGCTCAACCTGGGCCAGATCACCACCATCAGCATCACGGCCACTGCAGCCAGTGTTGGGGCTGCCGGCATCCCCCAGGCAGGTCTGGTCACTATGGTCATTGTGCTCACGTCAGTTGGGCTGCCCACGGAAGACATCACGCTGATCATAGCAGTGGACTGGTTCCTTGACCGGCTTCGCACGATGACTAATGTGTTGGGGGACTCAATTGGAGCGGCTGTCATTGAGCATTTATCCCAGCAGGAGCTGGACCTGCAGGAAGCCGAACTCACCCTCCCCAGCCTGGGGAAGCCCTACAAGTCACTCATGGCACAAGAAAAGGGGGTGTCCAGGGGTCGGGGTGGTAACGAGAGTGCCATGTGA

Related Sequences

XP_004872568.1 Protein

Slc1a6 PREDICTED: excitatory amino acid transporter 4 isoform X2 [Heterocephalus glaber]

Length: 564 aa      View alignments
>XP_004872568.1
MSSHGNSLFLRESGQRLGRTGWLQRLRDSLQQRALRTRLRLQTLTRERVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMDLVRNMFPPNLVEACFKQFKTQYSTRVVTRTIVRTENGSELGASMPPPSSVENETSFLENVTRALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPLIYFLITHRNPFPFIGGLLQALITAMGTSSSSATLPITFRCLEECLGVDRRITRFVLPVGATVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQQELDLQEAELTLPSLGKPYKSLMAQEKGVSRGRGGNESAM