Details from NCBI annotation

Gene Symbol Lphn1
Gene Name latrophilin 1, transcript variant X3
Entrez Gene ID 101708219

Database interlinks

Part of NW_004624901.1 (Scaffold)

For more information consult the page for NW_004624901.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LPHN1 ENSCPOG00000026254 (Guinea pig)

Gene Details

latrophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014757, Guinea pig)

Protein Percentage 97.03%
CDS Percentage 89.95%
Ka/Ks Ratio 0.01802 (Ka = 0.0148, Ks = 0.8215)

LPHN1 ENSG00000072071 (Human)

Gene Details

latrophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000340688, Human)

Protein Percentage 98.36%
CDS Percentage 91.32%
Ka/Ks Ratio 0.01008 (Ka = 0.0069, Ks = 0.6811)

Lphn1 ENSMUSG00000013033 (Mouse)

Gene Details

latrophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000118452, Mouse)

Protein Percentage 98.42%
CDS Percentage 89.16%
Ka/Ks Ratio 0.00924 (Ka = 0.0069, Ks = 0.7508)

Lphn1 ENSRNOG00000029134 (Rat)

Gene Details

latrophilin 1 (Lphn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042610, Rat)

Protein Percentage 98.22%
CDS Percentage 89.62%
Ka/Ks Ratio 0.01138 (Ka = 0.0078, Ks = 0.6867)

Genome Location

Sequence Coding sequence

Length: 4404 bp    Location: 1402632..1374542   Strand: -
>XM_004872475.1
ATGGCCCGCCTGGCCGCCGTGCTCTGGAGTCTCTGTGTCACTGCCATCCTGGTCACCTCGGCCACTCAAGGCCTGAGCCGTGCTGGGCTCCCATTTGGGCTGATGCGCCGGGAGCTGGCGTGCGAAGGTTACCCCATTGAGCTGCGGTGCCCGGGCAGCGATGTCATCATGGTGGAAAATGCCAACTATGGGCGCACAGATGACAAGATCTGTGATGCTGACCCTTTCCAGATGGAAAACGTGCAGTGCTACCTCCCGGATGCCTTCAAGATCATGTCGCAAAGGTGTAACAACCGCACCCAGTGTGTGGTGGTCGCTGGCTCCGACGCCTTTCCTGACCCTTGTCCTGGGACCTACAAGTACCTGGAGGTGCAGTACGACTGTGTCCCCTACAAAGTGGAGCAGAAAGTCTTTGTGTGCCCAGGGACCCTGCAGAAGGTGCTAGAGCCCACCTCAACGCATGAGTCGGAGCACCAGTCAGGTGCATGGTGCAAGGACCCACTGCAGGCGGGCGACCGCATCTACGTCATGCCCTGGATCCCCTACCGCACGGACACGCTCACCGAGTATGCCTCATGGGAGGACTATGTGGCTGCACGCCACACTACCACCTACCGGCTGCCCAACCGTGTGGATGGCACAGGCTTCGTGGTCTATGATGGCGCTGTCTTCTACAACAAGGAGCGAACGCGCAACATTGTCAAGTACGACCTGAGGACGCGCATCAAAAGCGGGGAGACGGTCATCAACACGGCCAACTACCATGACACTTCGCCCTATCGCTGGGGCGGCAAGACTGACATTGACCTGGCTGTGGACGAGAACGGACTGTGGGTTATCTACGCCACCGAGGGCAACAATGGGCGGCTGGTGGTGAGCCAGCTCAATCCCTACACACTGCGGTTCGAGGGCACATGGGAGACCGGCTACGATAAGCGCTCAGCCTCCAATGCCTTCATGGTGTGTGGTGTGCTCTATGTGCTGCGCTCTGTGTATGTGGATGATGACAGTGAGGCCGCCGGCAACCGCGTGGACTATGCCTTCAACACCAACGCCAACCGCGAGGAGCCCGTCAGCCTGGCCTTCCCCAACCCCTACCAGTTTGTCTCTTCCGTGGACTACAACCCCCGTGACAACCAGCTGTACGTCTGGAACAACTACTTTGTGGTGCGCTACAGCCTGGAATTCGGGCCACCAGACCCCAGCGCTGGCCCAGCTACGTCCCCACCACTCAGCACAACCACCACTGTCCGGCCCACGCCCCTTACCAGCACAGCCTCACCTGCAGCCACCACCCCACTTCGCCGGGCGCCCCTCACCACACACCCAGTGGGCGCCATCAACCAGCTTGGACCTGACCTGCCTCCAGCCACAGCTCCTGCCCCCAGCACCCGGCGGCCCCCAGCCCCCAACCTGCACGTGTCCCCCGAGCTCTTCTGTGAACCCCGAGAGGTGCGGCGGGTCCAGTGGCCGGCCACCCAACAGGGCATGCTGGTGGAGAGGCCTTGCCCCAAGGGCACCCGAGGAATTGCCTCATTCCAGTGTCTGCCAGCCCTAGGGCTCTGGAACCCCCGGGGCCCTGATCTCAGCAACTGCACCTCCCCCTGGGTCAACCAGGTGGCCCAGAAGATCAAAAGCGGAGAGAATGCAGCCAACATCGCCAGCGAACTGGCCCGCCACACTCGGGGCTCCATCTATGCAGGGGACGTGTCCTCATCGGTGAAGCTCATGGAGCAGCTCCTAGACATCCTGGATGCCCAGCTGCAGGCCTTGCGGCCTATTGAGCGCGAGTCAGCCGGCAAGAACTACAACAAGATGCACAAACGAGAGCGAACCTGCAAGGATTACATCAAGGCCGTGGTAGAAACAGTGGACAACCTCCTCCGGCCAGAGGCACTCGAGTCATGGAAGGACATGAATGCCACAGAGCAGGTGCACACGGCCACCATGCTCCTAGATGTGCTAGAGGAGGGCGCCTTCTTGCTGGCTGACAATGTCAGGGAGCCTGCCCGCTTCCTGGCCGCCAAGCAGAATGTGGTCCTGGAGGTCACTGTCCTGAACACGGAGGGCCAGGTGCAGGAACTGGTCTTTCCCCAGGAGTACCCCAGCGAGAATTCCATCCAGCTGTCCGCCAATACCATCAAGCAGAACAGCCGCAATGGAGTGGTCAAAGTTGTCTTCATCCTCTACAACAACTTGGGCCTTTTCCTGTCCACGGAGAATGCCACAGTGAAGCTGGCGGGTGAGGCCAGCGCGGTGGGCACCGGGGGTGCCTCCCTTGTGGTGAACTCACAGGTCATCGCTGCATCCATTAACAAGGAATCTAGCCGCGTTTTCCTCATGGACCCTGTCATCTTCACCGTGGCCCATCTGGAGGCCAAGAACCATTTCAATGCCAACTGCTCCTTCTGGAACTACTCAGAGCGCTCCATGTTGGGCTACTGGTCAACCCAGGGCTGCCGCCTGGTGGAGTCCAACAAGACCCACACCACCTGTGCCTGCAGCCACCTCACCAACTTTGCAGTGCTCATGGCTCACCGAGAGATCTACCAGGGTCGCATCAACGAGCTGCTGCTATCAGTCATCACCTGGGTGGGCATTGTCATCTCCTTGGTCTGCCTGGCTATCTGCATCTCTACCTTCTGCTTCCTGCGGGGGCTGCAGACCGACCGCAACACCATCCACAAGAACCTGTGCATCAACCTCTTCCTGGCTGAGCTGCTCTTCCTGGTCGGGATAGACAAGACTCAGTATGAGATCGCCTGCCCAATCTTTGCTGGCCTGCTGCACTACTTCTTCCTGGCTGCCTTCTCCTGGCTGTGTCTGGAGGGCGTGCACCTCTACCTGCTGCTGGTGGAAGTGTTCGAGAGCGAGTACTCCCGCACCAAGTACTACTATCTGGGTGGCTACTGCTTCCCAGCCCTGGTGGTGGGCATCGCAGCAGCCATCGACTACCGCAGCTATGGCACCGAGAAGGCCTGCTGGCTCCGAGTAGACAATTACTTCATCTGGAGCTTCATTGGGCCAGTCTCCTTTGTCATTGTGGTGAACCTAGTGTTTCTCATGGTGACCCTACACAAGATGATCCGAAGCTCCTCCGTGCTAAAGCCAGACTCCAGTCGCCTCGACAACATTAAGTCCTGGGCCCTGGGGGCCATCGCACTGCTCTTCCTACTGGGGCTCACCTGGGCTTTTGGCCTCCTCTTCATCAACAAGGAGTCAGTGGTCATGGCCTATCTCTTCACCACCTTCAACGCCTTCCAGGGGGTCTTCATCTTCGTCTTTCACTGCGCCTTACAGAAGAAGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACTCCTACTGCTGCATCCGCTCCCCCCCGGGGGGAACGCACGGCTCCCTTAAGACCTCAGCCATGCGGAGCAATACCCGCTACTACACGGGCACCCAGAGCCGAATCCGGAGAATGTGGAATGACACAGTGAGGAAACAGACGGAGTCCTCCTTCATGGCAGGGGACATCAACAGCACGCCCACCCTGAACCGAGGTACCATGGGGAACCACCTACTGACCAACCCCGTGCTGCAGCCCCGAGGGGGCACCAGCCCCTACAACACCCTCATCGCCGAGTCAGTGGGCTTCAACCCCTCCTCACCCCCCGTCTTCAACTCCCCAGAGCACCCCTTGGGAGGCCGAGAAGCCTGCGGCATGGACACCCTGCCCCTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGTGGAGACTTCCCACCTGGGGATGGGGCCTCAGAGCCACCACGAGGCCGCAACCTGGCCGATGCTGCAGCCTTTGAGAAGATGATCATCTCGGAGCTGGTGCACAACAACCTGAGGGGCGGTGGCAGTGGGGCCAAGGGCCCCCCGCCACCCGAGCCCCCCGTGCCGCCGGTGCCAGGGGGCGGTGGCGAGGAAGAGCCCAGTGGGCCTGGGAGCGCTGACCGGGCAGAGATTGAACTTCTCTACAAGGCCCTGGAGGAGCCACTGCTGCTGCCCCGGGCCCAGTCGGTGCTGTATCAGAGTGACCTGGATGAGTCAGAGAGCTGCACAGCAGAGGATGGCGCCACCAGCCGGCCCCTCTCCTCCCCTCCGGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGCCCTCCTACCCGGACAGCAGCCCCGAGGGGCCCAGCGAGGCCCTGCCCCCACCTCCGCCTGCACCCCCAGGGCCCCCCGAAATCTACTATACTTCTCGCCCACCGGCCCTGGTGGCCCGGAACCCCCTGCAGGGTTACTACCAGGTGCGGCGGCCTAGCCATGAGGGCTACCTGGCGGCCCCAGGCCTCGAGGGGCCAGGGCCCGATGGGGACGGGCAGATGCAGCTGGTCACCAGTCTCTGA

Related Sequences

XP_004872532.1 Protein

Lphn1 PREDICTED: latrophilin-1 isoform X3 [Heterocephalus glaber]

Length: 1467 aa      View alignments
>XP_004872532.1
MARLAAVLWSLCVTAILVTSATQGLSRAGLPFGLMRRELACEGYPIELRCPGSDVIMVENANYGRTDDKICDADPFQMENVQCYLPDAFKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVPYKVEQKVFVCPGTLQKVLEPTSTHESEHQSGAWCKDPLQAGDRIYVMPWIPYRTDTLTEYASWEDYVAARHTTTYRLPNRVDGTGFVVYDGAVFYNKERTRNIVKYDLRTRIKSGETVINTANYHDTSPYRWGGKTDIDLAVDENGLWVIYATEGNNGRLVVSQLNPYTLRFEGTWETGYDKRSASNAFMVCGVLYVLRSVYVDDDSEAAGNRVDYAFNTNANREEPVSLAFPNPYQFVSSVDYNPRDNQLYVWNNYFVVRYSLEFGPPDPSAGPATSPPLSTTTTVRPTPLTSTASPAATTPLRRAPLTTHPVGAINQLGPDLPPATAPAPSTRRPPAPNLHVSPELFCEPREVRRVQWPATQQGMLVERPCPKGTRGIASFQCLPALGLWNPRGPDLSNCTSPWVNQVAQKIKSGENAANIASELARHTRGSIYAGDVSSSVKLMEQLLDILDAQLQALRPIERESAGKNYNKMHKRERTCKDYIKAVVETVDNLLRPEALESWKDMNATEQVHTATMLLDVLEEGAFLLADNVREPARFLAAKQNVVLEVTVLNTEGQVQELVFPQEYPSENSIQLSANTIKQNSRNGVVKVVFILYNNLGLFLSTENATVKLAGEASAVGTGGASLVVNSQVIAASINKESSRVFLMDPVIFTVAHLEAKNHFNANCSFWNYSERSMLGYWSTQGCRLVESNKTHTTCACSHLTNFAVLMAHREIYQGRINELLLSVITWVGIVISLVCLAICISTFCFLRGLQTDRNTIHKNLCINLFLAELLFLVGIDKTQYEIACPIFAGLLHYFFLAAFSWLCLEGVHLYLLLVEVFESEYSRTKYYYLGGYCFPALVVGIAAAIDYRSYGTEKACWLRVDNYFIWSFIGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNIKSWALGAIALLFLLGLTWAFGLLFINKESVVMAYLFTTFNAFQGVFIFVFHCALQKKVHKEYSKCLRHSYCCIRSPPGGTHGSLKTSAMRSNTRYYTGTQSRIRRMWNDTVRKQTESSFMAGDINSTPTLNRGTMGNHLLTNPVLQPRGGTSPYNTLIAESVGFNPSSPPVFNSPEHPLGGREACGMDTLPLNGNFNNSYSLRSGDFPPGDGASEPPRGRNLADAAAFEKMIISELVHNNLRGGGSGAKGPPPPEPPVPPVPGGGGEEEPSGPGSADRAEIELLYKALEEPLLLPRAQSVLYQSDLDESESCTAEDGATSRPLSSPPGRDSLYASGANLRDSPSYPDSSPEGPSEALPPPPPAPPGPPEIYYTSRPPALVARNPLQGYYQVRRPSHEGYLAAPGLEGPGPDGDGQMQLVTSL