Details from NCBI annotation

Gene Symbol Palm3
Gene Name paralemmin 3, transcript variant X3
Entrez Gene ID 101706039

Database interlinks

Part of NW_004624901.1 (Scaffold)

For more information consult the page for NW_004624901.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PALM3 ENSCPOG00000001125 (Guinea pig)

Gene Details

paralemmin 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001017, Guinea pig)

Protein Percentage 65.7%
CDS Percentage 72.82%
Ka/Ks Ratio 0.22793 (Ka = 0.2637, Ks = 1.1567)

PALM3 ENSG00000187867 (Human)

Gene Details

paralemmin 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000344996, Human)

Protein Percentage 63.58%
CDS Percentage 70.88%
Ka/Ks Ratio 0.26479 (Ka = 0.2884, Ks = 1.0891)

Palm3 ENSMUSG00000047986 (Mouse)

Gene Details

paralemmin 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051396, Mouse)

Protein Percentage 55.75%
CDS Percentage 64.53%
Ka/Ks Ratio 0.27658 (Ka = 0.409, Ks = 1.4788)

Palm3 ENSRNOG00000005729 (Rat)

Gene Details

Protein Palm3; RCG51505, isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007535, Rat)

Protein Percentage 54.99%
CDS Percentage 63.58%
Ka/Ks Ratio 0.26786 (Ka = 0.4442, Ks = 1.6584)

Genome Location

Sequence Coding sequence

Length: 2106 bp    Location: 1296480..1288899   Strand: -
>XM_004872468.1
ATGAGTCCCCTGATTTGCATGCTAAGCAGGCCGGTGGCCGAGAGCTCCCTCTACCGGCAGCGGCTGGAGGTCATCGCTGAGAAGCGGCGGCTGCAGGAGCAGATCCGCACGGCGCGCCGCGAGCTGGAGGAGGAGAAGCTCCGCGTGCAGCGGCTCAAGAGGAAATCCCTGCGAGAGCGCTGGCTGATGGACGGCGCCACGGAAGGACCTGAGCAGCCCGGGGACCCTGCCGCCCAGGACCCCCAATCGCCAGAGGGCCAGGCCCAGGCTCGCATCCGAAACCTGGAGGACAGCCTGTTCACACTCCAGTCCCAGCTCCAGCTGCTGCAGAGCGCTTCCACAGGTGCCCAGCACCGGCCCCCAGGCAGGCCCTCCTGGCGAAGACAGGGTTACCGTCCTCTCTCCCAGCCCATCATGGAAGCAGGTCCTGCAGGCCAGGCGGATGTGGACAAGAGAGCTTCCCTGCCAGTGGGGCCCATGGGTTTGTCCCCAGAGTCCCCCTCTGAGCCCAGGGAGGGGGCCCCAAGGCCAGTCTCTGGAGCAGGGGAGTCCCCCCAAGAAGCCAATGGCCCCTGCTCGGGGCCCAGCATGCCTCCAGAGCAGCGGCAGAGCCTGGGGACAGGGACTGTGGCAGAGGGGAGTGTGGTGGAGGCCAAAGGGGGGGACATGGTAGAAGTAGTGTGGGGGGGGCTCCAGGGCCCCCAGGACTGTGCCATGGGTGCCACTGGCCCAGAGCTGGAGGCCAGGGTGGAGCAGGTGGTACTGGAGGCCATAGGGGACAGACAGAGGCCTGGCAGCCCCAAGCTCCCGGCCTGGGTGAGGGAGGACAGGGGCATTGTGGAGGTGGTCTGGGAGGGGCTGGGGGGCAGTGACCATGAGACCCTGGAAGAGGTGGGTGGTGGTGACCTGGAGCTCCAGGAGCGCCTTGGGGGCCCAGGGTCCAGAGACAGGGGGCCTGACAAGCAGGGGGAACCCAGGAGGGACGAGGGCTCCTTCATCTGGGTGGAGAGGGTGACGCTCAGTGAGGACTGGGAGGAGCTGCTGATGGAGGGCTTGGAGGGGCCCCCGGAGACTGGCAGGGAAGCTGGTGTCGAGGGACTGCCAGGGACAGACAGGGGAGGAGGTGGGGAGGGGAAGGTGGAGGGGCCTGCGGGGGCAGGGGAGAAGGGGGCCGAGGAGAGGCCGGGGACAGAGAAGGATGGGGGGCACAGGCCGCTGGAGGGGATGCAGAAAGAAAGCTGGGCATCCTCAGAGCCAGAGGGGACAGCAGGCGAGCAGAGAGAGAGCGCCGAACAGGATTTGGGCGTCGAGAGGAACGAGATGGAGGGGCCTCTGAGGGCAGAGAGGGGACACAGGGAGGAGAGGCCAGGAGCAGAGACGGAGGCGCCGCTGGGAGTGGACAAGGAAGGAGGTGAGGAGAGGGCAAAGGAGAAAGCTGAGCAGCCACTGGGATCCGAGACAGTGGGCGAAGAGGGGTCTCTGGGGGCAGGGAGAGGAGGTGGGGAAGAGGGGGGGGCAGCGGGGAGAGACGATGAGGAGCCAGTGGACGTGAAGGAGAAAGGAGGTAAGGAAGAGCCAGGCGTGACTGAAGAGCCCTTGGTGACAGAGAGGGAAGGAAGTAAGGAGCCCCTGGTGACAGAAAGAAAAGAAGGCGAGGAGCCCTTGGGAGAAGAGGAGACTCCTGGGGCCCAGGACTTGCAGAATGGGACAGAGCAGAGGGAAGCAGGGGAGGGAAGGGAATCCCAGACTAAGGCAGGGAGTGAGGCGGGTTTGCCCCTTGAGGTCATGCAGGAGATGGCCCCAGAGTTGCAGCCCCCAGAGAAGCAAGAAGGCTATCTGGAAGAAGAGGCAGGGGTGCCCCAACCTCCTGCTGAGGCCCAGGGCCCCGCTGGGGACGCCACCCCACTCCTGGCTGAGACCCCCGCCCCAGACCAGCCCACCGAGAGCCAGCCGCTGCTTCCATGGGAGGGACCCAGCACCAACCCCAGCGCCCACCCCGCACCCACCTATGCCCCCGCCCGGCAGCCTGAGCCCACCTCCCGTGCTGAGGGTGAGGAGGCAAGCGGCCCCAAGCAGAAGACGTGCCAGTGCTGTGCAGTGATGTGA

Related Sequences

XP_004872525.1 Protein

Palm3 PREDICTED: paralemmin-3 isoform X3 [Heterocephalus glaber]

Length: 701 aa      View alignments
>XP_004872525.1
MSPLICMLSRPVAESSLYRQRLEVIAEKRRLQEQIRTARRELEEEKLRVQRLKRKSLRERWLMDGATEGPEQPGDPAAQDPQSPEGQAQARIRNLEDSLFTLQSQLQLLQSASTGAQHRPPGRPSWRRQGYRPLSQPIMEAGPAGQADVDKRASLPVGPMGLSPESPSEPREGAPRPVSGAGESPQEANGPCSGPSMPPEQRQSLGTGTVAEGSVVEAKGGDMVEVVWGGLQGPQDCAMGATGPELEARVEQVVLEAIGDRQRPGSPKLPAWVREDRGIVEVVWEGLGGSDHETLEEVGGGDLELQERLGGPGSRDRGPDKQGEPRRDEGSFIWVERVTLSEDWEELLMEGLEGPPETGREAGVEGLPGTDRGGGGEGKVEGPAGAGEKGAEERPGTEKDGGHRPLEGMQKESWASSEPEGTAGEQRESAEQDLGVERNEMEGPLRAERGHREERPGAETEAPLGVDKEGGEERAKEKAEQPLGSETVGEEGSLGAGRGGGEEGGAAGRDDEEPVDVKEKGGKEEPGVTEEPLVTEREGSKEPLVTERKEGEEPLGEEETPGAQDLQNGTEQREAGEGRESQTKAGSEAGLPLEVMQEMAPELQPPEKQEGYLEEEAGVPQPPAEAQGPAGDATPLLAETPAPDQPTESQPLLPWEGPSTNPSAHPAPTYAPARQPEPTSRAEGEEASGPKQKTCQCCAVM