Details from NCBI annotation

Gene Symbol Rfx1
Gene Name regulatory factor X, 1 (influences HLA class II expression), transcript variant X3
Entrez Gene ID 101703619

Database interlinks

Part of NW_004624901.1 (Scaffold)

For more information consult the page for NW_004624901.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3468 bp    Location: 1260099..1231023   Strand: -
>XM_004872459.1
ATGGCGACCAATAGTATACCGGAAGGGCTTGGCGTCGTCCAATCAACTCTCCCAGCACCGCCAATCACCCAGAGCCACGCCCCTACGCGTGACGAAAGTAGGGTGGGTAGCAACAGTTGCCCCGGTGAGGGAAACGGAGGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGGCCGACCGACCCCCACCCCCACCCCCACCCCCGGCTTGGCCTGGGGACCCTGGCACGTTCCGTTCCCCTCCCCACATCGCCACTGAGGCCTCCGAAAAGCCGTTCCGCGGACAGAAGCGGGTAGAAGCCAAGAGAAGAAAAAAAGTCTTATTTATTATCATTTTCCCCACTGTTGGCATGGCAACCCAGGCATACGTTACAGAGCTACAGGCAGCCTCGAAAGCATCGCAGCCACCTCAGGCCCCACCCCAGGCCCAGCCCCAGCCGCCACCCCCACCACCCCCAGCAGCACCCCAGCCCTCCCAGCCGCCCACTGCTGCCACCACCCCCCAGCCCCAGTATGTCACCGAACTGCAGAGCCCCCAGCCGCAGGCACAGCCCCCAGGTGGCCAGAAGCAGTATGTGACTGAGCTCCCAACTGCCCCTGAGCCCTCGCAGCCAGCCGGAGCACCCACCTCGGCCCCCACGTCACAGCAATACATCGTGGTCACCGTCTCGGAAGGTGCCATGCGGGCCAGCGAGACTGTGTCAGAGGCCAGCCCAGGTGCCACGGCCAGCCAGACCGGCGTCCCCACCCAGGTGGTGCAGCAGGTGCAGGGCACCCAGCAGCAGCTGCTGGTCCAGAGCGTGCAGGCCAAGCCAGGCCATGTGTCCCCGCTCCAGCTCACCAACATCCAGGTGCCCCAGCAGGTTCTCCCCACACAGCGTCTGGTGGTACAGAGTGCGGCACCTGGCAGCAAGGGCAGCCAGGTCTCCTTGACAGTGCACGGAACTCAGCAGGTGCACTCGCCCCCAGAGCGGTCACCGGTGCAGGCCAACAGCTCCTCCAGCAAGACGGCCGGGACCCCCTCGGGCACAGTGCCACAGCCGCTGCAGGTCCATGGCATCCAGCAGAGCGTCTCTGTATCCCAAGAGAGGTCGGTGGTCCAGGCCACCCCACAGGCGCCCAAAGCAAGCCCGGTGCAGCAGCTGAGTGTCCAGGGGCTCCAGCCAGTCCACGTGGTCCAAGAGGTGCAGCAGCTCCAGCAGGTGCCCGTGCCACATGTGTACTCCAGCCAAGTACAGTATGTGGAGGGTGGCGACGCCAGCTACACGGCCAGTGCCATCCGCTCCAGCACGTACCCGTACCCCGAGACGCCGCTGTACACACAGACAGGGGGCACCAGCTACTATGAGGCCGCGGGCACGACTGCCCAGGTTAGCACACCCGCCACCTCACAGACGGGGGCCAGCAGCGCTTCTGTGCCCATGTATGCATCCGGCAGCCCAATCGTCGCCAGCTCGACCAGCAGTGCTGGTGGGGCCAGCAGTGGTGGTGGAGGCAGTGGTGGCAGCGGGGGAGGCACTGGCAATGGCAGTGGCAGCGGGAATGGCAGTGGCAGCAGCGGCGGAGCGGGCACCTACGTGATCCAAGGCGGCTACATGCTGGGCAGCACCAGCCAGTCTTATTCCCACACCACCCGTGCCTCACCAGCCACCGTCCAGTGGCTCCTGGACAACTATGAGACGGCGGAGGGCGTGAGCCTGCCACGCAGCACCCTCTACTGCCACTACCTGCTGCACTGCCAGGAGCAGAAGCTGGAGCCCGTTAACGCTGCCTCCTTCGGCAAGCTCATCCGCTCTGTCTTTATGGGTCTGCGGACGCGCCGCCTTGGCACCAGGGGCAACTCCAAGTACCACTACTATGGCCTGCGAATCAAGGCTAGCTCACCCCTGCTGCGGCTCATGGAGGACCAGCAACACATGGCCATGCGGGGTCAGCCCTTTTCCCCGAAGCAGAGGCTCAAGCCCATCCAGAAGATGGAGGGCATGACCAATGGTGTGGCCGTGGGGCAGCAGCAGCCTGCAGGGCTGTCAGACATCAGCGCGCAGGTCCAACAGTACCAGCAGTTCCTGGATGCATCCCGTAGCCTCCCTGACTTCACGGAGCTCGACCTCCAGGGCAAAGTGCTTCCCGAGGGTGTTGGACCAGGGGACATCAAGGCTTTCCAGGTCCTGTACCGGGAACACTGTGAGGCCATCGTGGATGTCATGGTAAACCTGCAGTTCACACTGGTGGAAACGCTGTGGAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAGCGAGGCACCACCATTGGCCGTGCACGATGAGGCTGAGAAGCGGCTGCCCAAGGCCAGCCTGGTGCTCCTCTCCAAGTTTGAGCCCGTGCTCCAGTGGACCAAGCACTGTGACAACGTGTTATACCAGGGCCTGGTGGAGATCCTCATCCCTGACGTGCTGCGGCCCATCCCCAGTGAGTGCTCGGCCACCCCTCCGCCCCCATATATTACCATCCACCCTGATCCCCTCCCCTCCCCGCCCCCCCCCGCTGCCCACAGGTGCCTTGACCCAAGCGATCCGGAACTTTGCCAAGAGTCTGGAGAGCTGGCTCACCCACGCCATGGTGAACATCCCCGAGGAGATGCTGCGGGTAAAGGTGGCGGCGGCAGGTGCCTTCGCGCAGACCCTGCGGCGCTACACGTCACTCAACCACCTGGCGCAAGCAGCGCGTGCCGTGCTGCAGAACACCGCGCAAATCAACCAGATGCTCAGCGACCTCAACCGCGTGGACTTTGCCAACGTGCAGGAGCAGGCCTCATGGGTGTGCCGCTGCGAGGACCGCGTGGTGCAGCGCCTGGAGCAGGACTTCAAGGTGACACTGCAGCAGCAGAACTCCCTAGAACAGTGGGCTGCCTGGCTGGACGGCGTCGTCAGCCAGGTGCTCAAGCCCTACCAGGGCAGCTCCGGCTTCCCCAAGGCCGCCAAACTCTTCCTCCTCAAGTGGTCCTTCTACAGCTCCATGGTGATCCGGGACCTGACCCTGCGCAGCGCTGCCAGCTTCGGCTCCTTCCACCTCATCCGGCTGCTGTACGACGAGTACATGTACTATTTGATCGAGCACCGCGTGGCGCAGGCCAAGGGGGAGACCCCGATTGCTGTCATGGGCGAGGTGCGTGGGGCCATGGGCGCAGGGGGCGCGGCGCTGCTGGCGGCGGGCCCTCATCTGTGCTCTTGTCCCCACAGTTTGCCAACCTGGCCACCTCGCTGAACCCCTTGGATGCAGACAAAGACGAAGAGGAGGAGGAGGAGGAGGAGAGCGAGGACGAGCTGCCACAGGACATCGCGCTGGCAGCCGGCGGCGAGTCGCCCGCGCTGGGCCCTGAGTCGCTGGAGCCGCCGGCCAAGCTGGCGCGCACGGATGCGCGCGGCCTCTTCGTGCAGGCGCTGCCGTCCAGTTAA

Related Sequences

XP_004872516.1 Protein

Rfx1 PREDICTED: MHC class II regulatory factor RFX1 isoform X3 [Heterocephalus glaber]

Length: 1155 aa     
>XP_004872516.1
MATNSIPEGLGVVQSTLPAPPITQSHAPTRDESRVGSNSCPGEGNGGAIATVVVATKQPGNASQQQQPADRPPPPPPPPAWPGDPGTFRSPPHIATEASEKPFRGQKRVEAKRRKKVLFIIIFPTVGMATQAYVTELQAASKASQPPQAPPQAQPQPPPPPPPAAPQPSQPPTAATTPQPQYVTELQSPQPQAQPPGGQKQYVTELPTAPEPSQPAGAPTSAPTSQQYIVVTVSEGAMRASETVSEASPGATASQTGVPTQVVQQVQGTQQQLLVQSVQAKPGHVSPLQLTNIQVPQQVLPTQRLVVQSAAPGSKGSQVSLTVHGTQQVHSPPERSPVQANSSSSKTAGTPSGTVPQPLQVHGIQQSVSVSQERSVVQATPQAPKASPVQQLSVQGLQPVHVVQEVQQLQQVPVPHVYSSQVQYVEGGDASYTASAIRSSTYPYPETPLYTQTGGTSYYEAAGTTAQVSTPATSQTGASSASVPMYASGSPIVASSTSSAGGASSGGGGSGGSGGGTGNGSGSGNGSGSSGGAGTYVIQGGYMLGSTSQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSPKQRLKPIQKMEGMTNGVAVGQQQPAGLSDISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSECSATPPPPYITIHPDPLPSPPPPAAHRCLDPSDPELCQESGELAHPRHGEHPRGDAAGKGGGGRCLRADPAALHVTQPPGASSACRAAEHRANQPDAQRPQPRGLCQRAGAGLMGVPLRGPRGAAPGAGLQGDTAAAELPRTVGCLAGRRRQPGAQALPGQLRLPQGRQTLPPQVVLLQLHGDPGPDPAQRCQLRLLPPHPAAVRRVHVLFDRAPRGAGQGGDPDCCHGRGAWGHGRRGRGAAGGGPSSVLLSPQFANLATSLNPLDADKDEEEEEEEESEDELPQDIALAAGGESPALGPESLEPPAKLARTDARGLFVQALPSS