Sequence details NCBI ID: XM_004872300.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc40a1
Gene Name solute carrier family 40 (iron-regulated transporter), member 1
Entrez Gene ID 101705673

Database interlinks

Part of NW_004624899.1 (Scaffold)

For more information consult the page for NW_004624899.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC40A1 ENSCPOG00000004749 (Guinea pig)

Gene Details

solute carrier family 40 (iron-regulated transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004281, Guinea pig)

Protein Percentage 52.35%
CDS Percentage 57.19%
Ka/Ks Ratio 0.02525 (Ka = 0.4126, Ks = 16.338)

SLC40A1 ENSG00000138449 (Human)

Gene Details

solute carrier family 40 (iron-regulated transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000261024, Human)

Protein Percentage 88.09%
CDS Percentage 87.97%
Ka/Ks Ratio 0.19945 (Ka = 0.0678, Ks = 0.3401)

Slc40a1 ENSMUSG00000025993 (Mouse)

Gene Details

solute carrier family 40 (iron-regulated transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027137, Mouse)

Protein Percentage 89.82%
CDS Percentage 86.26%
Ka/Ks Ratio 0.11598 (Ka = 0.0575, Ks = 0.4955)

Genome Location

Sequence Coding sequence

Length: 1728 bp    Location: 685184..701725   Strand: +
Raw sequence   
>XM_004872300.1
ATGAGCAGGGCAGGAGCGCAGGGCCGCCGGGGAGGATGCTGCGGATCCTTTGCAAACTACCTGACCTCGGCCAAATTCCTTCTCTACCTTAGTCATTCTCTCTCCACTTGGGGAGATCGCATGTGGCACTTCGCGGTGTCTGTGTTTCTCGTAGAGCTCTATGGAAACAGTCTCCTCTTGACTGCAGTCTACGGGCTGGTGGTGGCAGGGTCTGTTCTGGTCCTGGGAGCCATCATCGGCGACTGGGTGGATAAGAACGCCAGGCTTAAAGTGGCCCAGACTTCCCTGGTGGTACAGAATGTTTCAGTCATCCTATGTGGGATCATCCTGATGATGGTTTTCTTACACAAAAATGAGCTTCTGACTATGTACCATGGATGGGTTCTTACTTCCTGCTATATCCTGATCATCACTATTGCAAATATTGCAAATTTGGCCAGTACTGCTACCGCGATAACAATCCAGAGGGATTGGATTGTTGTTGTTGCAGGAGAGGACAGAAGCAAATTAGCAGATATGAACGCTACCATACGAAGGATTGACCAGCTAACCAACATCTTGGCTCCCATGGCTGTGGGTCAGATTATGACATTTGGGTCCCCAGTCATTGGCTGCGGCTTCATCTCGGGATGGAATTTGGTGTCCATGTGTATGGAGTACTTTCTGCTCTGGAAGGTCTACCAGAAAACCCCTGCCCTGGCTGTGAAAGCTGCTCTTAAAGGAGAGGAAACTGAAATGAAACAGCTGAATGTATACAAAGATACTGAGCCAAAATCCCTGGAGGGAACTCGTCTAATGGGAGAGAAAAACCCCGACATCCGTGAACTTGAATCCAAGCAAGAGCCCAGCTGTGCTTCCCAGATAACAGAGCCCTTCCGCACCTTCCGAGACGGATGGGTCTCCTACTACAACCAGCCAGTGTTTCTGGCTGGCATGGGTCTTGCCTTCCTTTATATGACTGTCCTGGGCTTTGACTGCATTACCACAGGCTACGCCTACACTCAGGGGCTGAGTGGTTCCATCCTCAGCATCTTGATGGGAGCATCAGCTATCACTGGAATAATAGGGACTGTGGCTTTCACTTGGCTGCGTCGAAAGTGTGGGCTGGTTCGGACTGGTGTGATCTCAGGATGGGCCCAGCTCTCCTGTTTGATCTTGTGCGTAATCTCTGTGTTCATGCCTGGAAGTCCCTTGGACTTGTCTGTGTCTCCTTTTGAAGATATTCGTTCCAGGTTCTTCCAAGGAGAACCAGTGTCCACAACCACCCGAATACCTGAGACCGTCTTCACCACAGAGACGCACCACATGGCCAACGGGTCTCATACCGCTGATGCTGTCCTGGAGATGAGCACCAAGCCCGTGCCCATAATCTCCGTCAGTCTGCTGTTTGCAGGCGTCATTGCTGCTAGAGTCGGTCTTTGGGCCTTTGATTTAACTGTGACACAGTTGCTGCAAGAGAATGTCATTGAGTCTGAAAGAGGCATTATAAATGGTGTCCAGAACTCCATGAACTATCTTCTTGATCTTCTGCACTTCATCATGGTCATCCTGGCCCCGAATCCCGAAGCTTTTGGCTTGCTCGTCCTGATTTCAGTCTCCTTTGTAGCGATGGGCCACATTATGTATTTCCGCTTTGCCCACAAAACTCTGGGCAACCAACTCTTTGTTTGTGGTTCTCAGGAAAAAGAAGTTTCAAATGAAAATCAGACCAATGCATCTGATGTGTAA

Related Sequences

XP_004872357.1 Protein

Slc40a1 PREDICTED: solute carrier family 40 member 1 [Heterocephalus glaber]

Length: 575 aa      
>XP_004872357.1
MSRAGAQGRRGGCCGSFANYLTSAKFLLYLSHSLSTWGDRMWHFAVSVFLVELYGNSLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKNELLTMYHGWVLTSCYILIITIANIANLASTATAITIQRDWIVVVAGEDRSKLADMNATIRRIDQLTNILAPMAVGQIMTFGSPVIGCGFISGWNLVSMCMEYFLLWKVYQKTPALAVKAALKGEETEMKQLNVYKDTEPKSLEGTRLMGEKNPDIRELESKQEPSCASQITEPFRTFRDGWVSYYNQPVFLAGMGLAFLYMTVLGFDCITTGYAYTQGLSGSILSILMGASAITGIIGTVAFTWLRRKCGLVRTGVISGWAQLSCLILCVISVFMPGSPLDLSVSPFEDIRSRFFQGEPVSTTTRIPETVFTTETHHMANGSHTADAVLEMSTKPVPIISVSLLFAGVIAARVGLWAFDLTVTQLLQENVIESERGIINGVQNSMNYLLDLLHFIMVILAPNPEAFGLLVLISVSFVAMGHIMYFRFAHKTLGNQLFVCGSQEKEVSNENQTNASDV