Sequence details NCBI ID: XM_004872252.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zc3h12b
Gene Name zinc finger CCCH-type containing 12B, transcript variant X2
Entrez Gene ID 101713956

Database interlinks

Part of NW_004624898.1 (Scaffold)

For more information consult the page for NW_004624898.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZC3H12B ENSCPOG00000007648 (Guinea pig)

Gene Details

zinc finger CCCH-type containing 12B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006892, Guinea pig)

Protein Percentage 94.48%
CDS Percentage 93.72%
Ka/Ks Ratio 0.14506 (Ka = 0.0272, Ks = 0.1872)

ZC3H12B ENSG00000102053 (Human)

Gene Details

zinc finger CCCH-type containing 12B

External Links

Gene Match (Ensembl Protein ID: ENSP00000340839, Human)

Protein Percentage 93.29%
CDS Percentage 92.33%
Ka/Ks Ratio 0.14012 (Ka = 0.0327, Ks = 0.2336)

Zc3h12b ENSMUSG00000035045 (Mouse)

Gene Details

zinc finger CCCH-type containing 12B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080820, Mouse)

Protein Percentage 89.93%
CDS Percentage 88.45%
Ka/Ks Ratio 0.13815 (Ka = 0.0533, Ks = 0.3858)

Zc3h12b ENSRNOG00000011508 (Rat)

Gene Details

Protein Zc3h12b; RCG36219

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045289, Rat)

Protein Percentage 89.81%
CDS Percentage 88.33%
Ka/Ks Ratio 0.1351 (Ka = 0.0533, Ks = 0.3943)

Genome Location

Sequence Coding sequence

Length: 2505 bp    Location: 1802219..1750494   Strand: -
Raw sequence   
>XM_004872252.1
ATGACGGCCACAGCTGCAGTGGAAACACCAAAAATGGAGAAAAGTGCCTCCAAGGAAGAGAAGCAGCAGCCTAAGCAGGATGGCATAGAGCAAGGCAATGCTGATTCTGAAGAGTGGATGAGCTCTGAGAGTGACCCTGAACAGGTAAGCCTTAAGAACAGCAACAATAGCTGCCAACCTGGAGATGGTCAGTTGAAGAAAAAGGAGATGCCTTCCAAGCCACACCGTCAGCTTTGTCGATCACCCTGTCTGGATCATCCGAGTTTCTCCCAGAGCAGCCTTTTACAGGATAGTAAGTTCAACTTAGAGAAAGAATACCAAGCCAAGATGGATTTTGCTCTAAAGCTGGGCTATGCTGAAGAACAGATTCAATCAGTGCTGAATAAGCTGGGCCCGGAATCACTTATTAATGATGTATTGGCTGAGCTTGTCAGACTTGGGAACAAAGATGACTCAGAAGGGCAGGTCAACTTGAGGCTGTTAGTGCCCCGGGGCCCCAGCTCCAGAGAAAGTGCAAGCCCTGAATTGTCTCTTGAAGATGAAATAGACAACAGTGATAATTTGAGGCCAATTGTCATTGATGGAAGTAATGTGGCAATGAGCCATGGGAATAAAGAAGAATTCTCCTGTAGAGGAATTCAACTTGCTGTGGATTGGTTTCAAGACAAAGGTCATAAAGATATCACTGTATTTGTGCCTGCATGGAGAAAGGAGCAATCCCGCCCTGATGCACCAATTACAGAACAAGATATTCTTCGTAAACTGGAGAAGGAAAAAATTCTAGTCTTCACACCTTCCCGAAGGGTCCAGGGCAGAAGGGTTGTATGCTATGATGACCGATTCATAGTTAAATTAGCATTTGATTCTGATGGCATCATTGTGTCCAATGACAACTACCGAGACCTTCAAGTCGAAAAGCCAGAATGGAAGAAGTTTATCGAGGAGCGGTTGCTGATGTATTCTTTTGTGAATGACAAATTTATGCCTCCAGATGATCCTTTAGGACGCCATGGCCCAAGCCTTGAAAATTTCTTAAGAAGAAGACCTATTGTTCCTGAGCATAAGAAGCAACCATGTCCTTATGGCAAAAAATGCACCTACGGGCACAAGTGCAAATACTACCATCCGGAGCGGGCCAACCAACCCCAGCGTTCGGTGGCTGATGAGCTCCGCATCAGTGCCAAACTGTCCACAGTGAAAACCATGAGCGAAGGCACCCTGGCCAAGTGTGGTACAGGGATGTCTAGTGTCAAAGGTGAGATAACCTCAGAGGTAAAACGTGTGGCACCCAAGCGCCAGTCAGATCCCAGCATCCGGTCTGTGGCTGTGGAGCCTGAGGAATGGCTGTCCATTGCCCGAAAGCCTGAGGCCAGCTCTGTCCCATCTCTTGTGACTGCCCTGAGTGTCCCCACAATCCCACCCTCCAAAAGCCATGCAGTGGGTGCATTAAACACCCGTTCGGCCAGCAGCCCGGTGCCAGGATCCTCTCATTTCCCCCACCAGAAGGCCTCTTTGGAGCACATGGCCAGCATGCAGTACCCCCCTATCCTGGTTACCAACAGCCATGGGACCCCAATTAACTACACTGAGCAATACCCAAAGTTTGAATCTATGGGGGACCATAGCTACTATTCAGTGTTAGGTGACTTCGCCAAACTGAACATCAACAGCATGCATAACAGAGAGTACTACATGGCTGAAGCAGATCGGGGCATGTATAGTTGGAATCCCAACTTCTGTCCTGACAGTCTTATGACCCACACCAGGAATGACAACTATTCCTCTTACAACAATCTGTACTTGGCTGTAGCTGATGCCCATCCTGAAGGCAGTTTGAAGCTGCACCGTTCAGCATCTCAGAACCGTCTTCAGCCTTTTTCTCATGGTTACCATGAAGCCTTAACTAGAGTGCAAAGTTATGGCCCAGAGGATTCCAAGCAAGGCCCCCACAAGCAGTCAGTCCCTCACTTAGCTCTGCATGCCCAGCACTCAGCAACTGGAGCACGCTCCAGCTGTCCTGGAGACTACGCCATGCCTCCCAATATTCAACCTGGGGCAACCTCCCAGCCAGGCCGTGCTCTAGTAATGACTCGGATGGACAGCATTTCTGATTCCCGACTGTATGAGAGCAACCCCTTGAGGCAAAGACGACCTCCTCTGTGCCGGGAACAGCATGCCAGCTGGGATCCACTGCCCAGTGCAACTGATTCCTATGGCTATCACTCCTGTCCCTTAAGTAACAGCCTCATGCAGCCATGTTATGAGCCAGTCATGGTACGGAGCATGCCTGAAAAGATGGAGCAGCTTTGGAGGAATCCTTGGGTTGGAATGTGCAATGATTCCAGGGAGCATATGATTCCAGAGCACCAATATCAGACTTACAAGAACCTTTGCAATATTTTCCCTTCTAATATTGTTCTTGCAGTGATGGAGAAGAATCCCCACACATCAGATGCCCAGCAATTGGCAGCTTTGATTGTTGCGAAGCTTAGAGCTGCACGTTGA

Related Sequences

XP_004872309.1 Protein

Zc3h12b PREDICTED: probable ribonuclease ZC3H12B isoform X2 [Heterocephalus glaber]

Length: 834 aa      View alignments
>XP_004872309.1
MTATAAVETPKMEKSASKEEKQQPKQDGIEQGNADSEEWMSSESDPEQVSLKNSNNSCQPGDGQLKKKEMPSKPHRQLCRSPCLDHPSFSQSSLLQDSKFNLEKEYQAKMDFALKLGYAEEQIQSVLNKLGPESLINDVLAELVRLGNKDDSEGQVNLRLLVPRGPSSRESASPELSLEDEIDNSDNLRPIVIDGSNVAMSHGNKEEFSCRGIQLAVDWFQDKGHKDITVFVPAWRKEQSRPDAPITEQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRDLQVEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRRRPIVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKTMSEGTLAKCGTGMSSVKGEITSEVKRVAPKRQSDPSIRSVAVEPEEWLSIARKPEASSVPSLVTALSVPTIPPSKSHAVGALNTRSASSPVPGSSHFPHQKASLEHMASMQYPPILVTNSHGTPINYTEQYPKFESMGDHSYYSVLGDFAKLNINSMHNREYYMAEADRGMYSWNPNFCPDSLMTHTRNDNYSSYNNLYLAVADAHPEGSLKLHRSASQNRLQPFSHGYHEALTRVQSYGPEDSKQGPHKQSVPHLALHAQHSATGARSSCPGDYAMPPNIQPGATSQPGRALVMTRMDSISDSRLYESNPLRQRRPPLCREQHASWDPLPSATDSYGYHSCPLSNSLMQPCYEPVMVRSMPEKMEQLWRNPWVGMCNDSREHMIPEHQYQTYKNLCNIFPSNIVLAVMEKNPHTSDAQQLAALIVAKLRAAR