Details from NCBI annotation

Gene Symbol Pcyt1b
Gene Name phosphate cytidylyltransferase 1, choline, beta, transcript variant X1
Entrez Gene ID 101699942

Database interlinks

Part of NW_004624897.1 (Scaffold)

For more information consult the page for NW_004624897.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCYT1B ENSCPOG00000008292 (Guinea pig)

Gene Details

phosphate cytidylyltransferase 1, choline, beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007455, Guinea pig)

Protein Percentage 99.73%
CDS Percentage 96.21%
Ka/Ks Ratio 0.00871 (Ka = 0.0013, Ks = 0.1465)

PCYT1B ENSG00000102230 (Human)

Gene Details

phosphate cytidylyltransferase 1, choline, beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000368439, Human)

Protein Percentage 98.64%
CDS Percentage 93.77%
Ka/Ks Ratio 0.02988 (Ka = 0.0076, Ks = 0.2532)

Pcyt1b ENSMUSG00000035246 (Mouse)

Gene Details

phosphate cytidylyltransferase 1, choline, beta isoform

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044280, Mouse)

Protein Percentage 99.19%
CDS Percentage 92.23%
Ka/Ks Ratio 0.01081 (Ka = 0.0038, Ks = 0.3504)

Pcyt1b ENSRNOG00000012358 (Rat)

Gene Details

phosphate cytidylyltransferase 1, choline, beta (Pcyt1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016669, Rat)

Protein Percentage 99.46%
CDS Percentage 92.77%
Ka/Ks Ratio 0.00729 (Ka = 0.0025, Ks = 0.3396)

Genome Location

Sequence Coding sequence

Length: 1110 bp    Location: 912842..842898   Strand: -
>XM_004872229.1
ATGCCAGTACTTACCACTGATGCTGAGTCAGAAACAGGTATCCCAAAATCCCTTTCCAATGAGCCTCCCTCAGAAACCATGGAGGAAATAGAGCACACATGCCCACAGCCTCGACTGACCCTGACTGCACCTGCCCCATTTGCAGATGAAACCAGCTGCCAGTGCCAAGCACCCCATGAAAAACTGACCATTGCTCAGGCTCGCTTAGGAACGCCAGTTGACAGGCCTGTCAGAGTGTATGCAGATGGAATATTTGACCTCTTTCATTCAGGTCATGCAAGGGCACTTATGCAAGCAAAAACACTGTTTCCCAACAGCTACTTGTTGGTAGGAGTTTGCAGTGATGATCTTACCCACAAATTCAAAGGTTTTACCGTGATGAATGAAGCAGAGAGATATGAAGCTCTCAGACACTGTCGCTACGTGGATGAAGTCATCAGAGATGCTCCGTGGACTCTCACGCCAGAGTTTCTGGAAAAACACAAGATTGACTTTGTGGCTCATGATGACATCCCATACTCTTCTGCCGGCTCGGATGACGTTTACAAGCATATAAAGGAAGCAGGAATGTTTGTTCCAACGCAGAGAACAGAAGGCATCTCCACATCAGATATCATCACTAGAATCGTCCGTGACTATGATGTTTATGCCCGACGCAACCTCCAGAGAGGGTACACAGCCAAGGAACTGAATGTCAGCTTTATAAATGAAAAGAAGTACCGTTTCCAGAACCAAGTGGACAAGATGAAAGAAAAAGTCAAGAACGTGGAGGAAAGGTCAAAGGAATTTGTTAACCGAGTGGAAGAAAAGAGCCATGATCTAATTCAAAAGTGGGAAGAGAAGTCGAGGGAATTCATTGGCAACTTCCTAGAACTGTTTGGCCCTGATGGAGCATGGAAACAGATGTTCCAGGAGAGGAGTAGCCGGATGCTACAGGCCTTATCCCCGAAGCAGAGTCCTGTGAGCAGCCCAACCAGGAGCCGGTCCCCTTCCCGCTCCCCATCACCCACCTTCTCCTGGCTCCCGAGCAAAACCTCACCCCCGTCCTCGCCCAAAGCTGCCTCAGCCTCCATCAGCAGCATGAGTGAGGGGGATGAGGATGAGAAGTAA

Related Sequences

XP_004872286.1 Protein

Pcyt1b PREDICTED: choline-phosphate cytidylyltransferase B isoform X1 [Heterocephalus glaber]

Length: 369 aa      View alignments
>XP_004872286.1
MPVLTTDAESETGIPKSLSNEPPSETMEEIEHTCPQPRLTLTAPAPFADETSCQCQAPHEKLTIAQARLGTPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSPSRSPSPTFSWLPSKTSPPSSPKAASASISSMSEGDEDEK