Details from NCBI annotation

Gene Symbol Apoo
Gene Name apolipoprotein O, transcript variant X2
Entrez Gene ID 101696400

Database interlinks

Part of NW_004624897.1 (Scaffold)

For more information consult the page for NW_004624897.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOO ENSCPOG00000004197 (Guinea pig)

Gene Details

apolipoprotein O

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003783, Guinea pig)

Protein Percentage 91.44%
CDS Percentage 92.87%
Ka/Ks Ratio 0.29148 (Ka = 0.0461, Ks = 0.1582)

APOO ENSG00000184831 (Human)

Gene Details

apolipoprotein O

External Links

Gene Match (Ensembl Protein ID: ENSP00000368528, Human)

Protein Percentage 85.86%
CDS Percentage 87.71%
Ka/Ks Ratio 0.22922 (Ka = 0.0754, Ks = 0.3288)

Apoo ENSRNOG00000046918 (Rat)

Gene Details

apolipoprotein O (Apoo), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065393, Rat)

Protein Percentage 81.31%
CDS Percentage 84.85%
Ka/Ks Ratio 0.24585 (Ka = 0.1025, Ks = 0.4169)

Genome Location

Sequence Coding sequence

Length: 597 bp    Location: 298928..233567   Strand: -
>XM_004872221.1
ATGTTCAAGGTACTTCAGAAGTCTGTGGGCCTGGCCAGCCTGAGCCTGCTCACCTTCAGAGTCTATGCTGCACCAAAAAAGGATTGGCCTCGCAAAAACTCCATGAAGATTGATGAGCTCTCACTCTACTCAGTTCCTGAGGGTCAGCCTAAATACATGGAGGAGCCAAGGACTCAGCTTGAAGAAAGCATCTCACAGCTCCGACATCACTGTGAGCCGTATACAAGTTGGTGCCAGGAAACGTATTCCCAAACTAAACCCAAGATGCAAAGTTTGGTTCAATGGGGATTAGACGGCTATGAATATCTCCAAAATGCTCCCCCAGGTTTTTTTCCAAGACTTGGTGTTATTGGTTTTGCTGGCCTTGTTGGACTTGTTTTCACTAGAGGTTCAAAAATAAAGAAGCTGGTGTATCCACCTGTTTTCATGGGATTAGCGGCCTCCATTTATTACCCACAACAAGCTATCACATTCGTCCAGGTCAGCGGAGAGAAGTTATATGACTGGGGCTTACGAGGATACATAGTCGTAGAAGATTTGTGGAAGGAGAACTTTCAGAAGCCAGGAAATGTGAAGAGTTCACCTGGAAATAAGTAG

Related Sequences

XP_004872278.1 Protein

Apoo PREDICTED: apolipoprotein O isoform X2 [Heterocephalus glaber]

Length: 198 aa     
>XP_004872278.1
MFKVLQKSVGLASLSLLTFRVYAAPKKDWPRKNSMKIDELSLYSVPEGQPKYMEEPRTQLEESISQLRHHCEPYTSWCQETYSQTKPKMQSLVQWGLDGYEYLQNAPPGFFPRLGVIGFAGLVGLVFTRGSKIKKLVYPPVFMGLAASIYYPQQAITFVQVSGEKLYDWGLRGYIVVEDLWKENFQKPGNVKSSPGNK