Sequence details NCBI ID: XM_004872216.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prdx4
Gene Name peroxiredoxin 4, transcript variant X2
Entrez Gene ID 101725295

Database interlinks

Part of NW_004624897.1 (Scaffold)

For more information consult the page for NW_004624897.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRDX4 ENSCPOG00000004185 (Guinea pig)

Gene Details

peroxiredoxin 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003774, Guinea pig)

Protein Percentage 93.7%
CDS Percentage 91.85%
Ka/Ks Ratio 0.13657 (Ka = 0.0328, Ks = 0.2405)

PRDX4 ENSG00000123131 (Human)

Gene Details

peroxiredoxin 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000368646, Human)

Protein Percentage 90.74%
CDS Percentage 87.41%
Ka/Ks Ratio 0.14622 (Ka = 0.0593, Ks = 0.4056)

Prdx4 ENSMUSG00000025289 (Mouse)

Gene Details

peroxiredoxin 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026328, Mouse)

Protein Percentage 90.0%
CDS Percentage 87.16%
Ka/Ks Ratio 0.13603 (Ka = 0.0577, Ks = 0.4243)

Prdx4 ENSRNOG00000003763 (Rat)

Gene Details

peroxiredoxin 4 (Prdx4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005014, Rat)

Protein Percentage 89.63%
CDS Percentage 86.79%
Ka/Ks Ratio 0.12135 (Ka = 0.0561, Ks = 0.4626)

Genome Location

Sequence Coding sequence

Length: 813 bp    Location: 95521..112920   Strand: +
Raw sequence   
>XM_004872216.1
ATGGAGGCGTCACCGCAGCTACAAGCCGAGAGGACTCTGGCCCCGAGATGGGGCCGAAAGCTGCTGCCGCTGCTGCTGTTCCTGCTCCAGACCGGGGCTCTGCGGGGCTTGGAGACCGAGGAGAGGCCCCGGACCCGAGAAGAGGAGTGCCACTTCTACGCTGGTGGACAAGTGTACCCGGGGGAGGTGTCCCGGGTGTCAGTCGCAGACCACTCCCTGCACCTAAGCAAAGCCAAGATTTCCAAGCCAGCACCTTATTGGGAAGGAACAGCTGTGATAAATGGAGAATTCAAGGAGCTGAAATTAACTGATTATCATGGGAAATACTTGGTTTTTTTCTTTTACCCACTTGATTTCACATTTGTGTGTCCAACTGAAATTATCGCTTTTGGTGACAGAATTGAAGAATTCAGATCCATAAATACTGAAGTGGTAGCATGTTCTGTTGATTCACAATTCACTCATTTGGCCTGGATTAATACTCCTCGGAGACAAGGAGGCCTGGGGTCGATAAGGATTCCACTTCTTTCAGACCTGAACCATCAGATCTCAAAGGACTATGGTGTCTACCTAGAGGACGCAGGCCACACTCTGAGAGGCCTCTTTATTATTGATGACAAAGGAATCCTGAGACAGATTACTCTGAATGACCTTCCTGTGGGCAGATCGGTGGACGAGACCCTACGTTTGGTTCAGGCATTCCAATACACCGACAAACACGGAGAAGTCTGCCCTGCTGGCTGGAAACCTGGTAGTGAAACAATAATTCCAGATCCAGCTGGCAAACTGAAGTATTTCGACAAACAAAATTGA

Related Sequences

XP_004872273.1 Protein

Prdx4 PREDICTED: peroxiredoxin-4 isoform X2 [Heterocephalus glaber]

Length: 270 aa      View alignments
>XP_004872273.1
MEASPQLQAERTLAPRWGRKLLPLLLFLLQTGALRGLETEERPRTREEECHFYAGGQVYPGEVSRVSVADHSLHLSKAKISKPAPYWEGTAVINGEFKELKLTDYHGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGSIRIPLLSDLNHQISKDYGVYLEDAGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKQN