Sequence details NCBI ID: XM_004872179.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ube3a
Gene Name ubiquitin protein ligase E3A, transcript variant X3
Entrez Gene ID 101709173

Database interlinks

Part of NW_004624896.1 (Scaffold)

For more information consult the page for NW_004624896.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UBE3A ENSCPOG00000005951 (Guinea pig)

Gene Details

ubiquitin protein ligase E3A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005371, Guinea pig)

Protein Percentage 98.83%
CDS Percentage 95.58%
Ka/Ks Ratio 0.0311 (Ka = 0.0054, Ks = 0.1742)

UBE3A ENSG00000114062 (Human)

Gene Details

ubiquitin protein ligase E3A

External Links

Gene Match (Ensembl Protein ID: ENSP00000381045, Human)

Protein Percentage 97.7%
CDS Percentage 94.57%
Ka/Ks Ratio 0.06093 (Ka = 0.0135, Ks = 0.2214)

Ube3a ENSMUSG00000025326 (Mouse)

Gene Details

ubiquitin protein ligase E3A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103161, Mouse)

Protein Percentage 96.21%
CDS Percentage 93.07%
Ka/Ks Ratio 0.05686 (Ka = 0.0177, Ks = 0.3109)

Ube3a ENSRNOG00000015734 (Rat)

Gene Details

ubiquitin protein ligase E3A (Ube3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021366, Rat)

Protein Percentage 96.2%
CDS Percentage 92.4%
Ka/Ks Ratio 0.0547 (Ka = 0.0185, Ks = 0.3387)

Genome Location

Sequence Coding sequence

Length: 2625 bp    Location: 135940..59321   Strand: -
Raw sequence   
>XM_004872179.1
ATGGCCACAGCTAGTAAAAGGTCACCAGGAGAACCCCAGTCTGACGACATTGAAGCTAGCCGAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAACGCTACTACCACCAGTTAACTGAGGGCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATAACAATGCAGCAGCTATTAAAGCCCTCGAGCTTTATAAGATTAATGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAACTCGAAAGGTGCCCCTAACAACTCTGAGATAAAAATGAACAAGAAGGATGGAAAAGGAGCTAGAATTGATTTTAAAGATGTGACTTATCTTACTGAAGAACTGGTGTATGAAATTCTTGAAATATGTAGAGAGAGAGAGGATTATTCCCCTTTAATCCGTGTTATTGGAAGAGTTTTTTCGAGTGCTGAGGCATTGGTACAGAGCTTTCGGAAGGTCAAACAGCACACCAAGGAAGAGCTGAAATCTCTTCAAGGAAAGGATGAAGACAAGGATGAAGATGAAAAGGAAAAAGCTGCATGTTCTGCCGCTGCTATGGAAGAAGATTCGGAAGCATCTTCCTCCAGGATAGTTGATAGCTCACAGGGAGACAACAATTTACAAAAATTAGGTCCCGATGATGTGTCTGTAGATATTGATGCTATTAGAAGAGTCTATACCAGATTGCTCTCCAATGAAAAAATAGAAACTGCTTTTCTTAATGCACTTGTATATTTGTCACCTAATGTAGAATGTGACTTGACATATCATAACGTATACTCTCGTGATCCTAATTACCTGAATTTGTTTATTATTGTAATGGAGAATAGGAATCTCCACAGTCCTGAATATCTGGAAATGGCATTGCCATTGTTTTGCAAAGCAATGAGCAAGTTACCCCTTGCAGCCCAAGGGAAACTGATTAGACTATGGTCTAAATACAGTGCAGACCAGATTCGGAGAATGATGGAAACGTTTCAGCAACTTATTACTTACAAAGTCATAAGCAATGAATTTAACAGTCGAAATCTAGTGAATGATGATGATGCTATTGTTGCTGCTTCAAAATGCTTAAAAATGGTTTACTATGCAAATGTCGTGGGAGGGGAAGTGGACACAAATCACAATGAGGAAGACGATGAAGAGCCCATCCCTGAGTCCAGCGAATTGACACTGCAAGAGCTTTTGGGAGAGGAAAGAAGAAACAAGAAAGGTCCTCGAGTGGACCCACTGGAAACTGAACTTGGTGTTAAAACTCTGGACTGTCGAAAGCCACTTATCTCTTTTGAGGAGTTCATTAATGAACCACTGAATGATGTTCTAGAAATGGATAAAGATTATACTTTTTTCAAAGTAGAAACAGAGAACAAATTTTCTTTTATGACATGTCCCTTCATATTGAATGCTGTCACAAAAAATTTGGGATTATATTATGACAATAGAATTCGTATGTACAGTGAACGAAGAATCACTGTTCTCTACAGCCTAGTTCAAGGACAGCAGTTGAATCCATATTTGAGACTCAAAGTCAGACGTGACCATATCATAGATGATGCACTTGTCCGGCTAGAGATGATTGCTATGGAAAATCCTGCAGACTTGAAGAAACAATTGTATGTGGAATTTGAAGGAGAACAAGGAGTTGATGAGGGTGGTGTTTCCAAAGAATTTTTTCAGTTGGTTGTGGAGGAAATCTTCAATCCAGATATTGGTATGTTCACATATGATGAATCTACAAAGTTATTTTGGTTTAATCCATCTTCTTTTGAAACTGAGGGTCAGTTTACTCTGATTGGCATAGTACTGGGTCTGGCTATTTACAATAACTGCATCCTGGATGTTCATTTCCCCATGGTTGTATACAGGAAGCTAATGGGGAAAAAAGGAACTTTTCGTGACTTGGGAGACTCCCACCCAGTTTTACATCAGAGTTTAAAAGACTTACTGGAATATGAAGGGAATGTGGAAGATGACATGATGATCACTTTCCAGATATCGCAGACAGATCTTTTTGGTAACCCAATGATGTATAATCTAAAGGAAAATGGTGATAAAATTCCAATTACAAACGAGAACAGGAAGGAATTTGTCAATCTCTATTCTGACTACATTCTCAATAAATCAGTAGAAAAACAGTTCAAGGCTTTTCGCAGAGGTTTTCATATGGTGACCAATGAATCTCCCTTGAAGTACTTGTTCAGACCAGAAGAAATTGAATTGCTTATATGTGGAAGCCGGAATCTAGATTTCCAGGCACTAGAAGAAACTACAGAATATGACGGTGGCTATACCAGGGACTCTGTTGTGATTAGGGAATTCTGGGAAATCGTTCATTCATTTACTGATGATCAGAAAAGACTCTTCTTGCAGTTTACAACGGGCACAGACAGAGCACCTGTGGGAGGACTAGGAAAATTAAAGATGATTATAGCCAAAAACGGCCCAGACACAGAAAGGTTACCTACATCTCATACTTGCTTTAATGTCCTTTTACTTCCGGAATATTCAAGCAAAGAAAAACTTAAAGAGAGATTGTTGAAGGCCATCACATATGCCAAAGGATTTGGCATGCTGTAA

Related Sequences

XP_004872236.1 Protein

Ube3a PREDICTED: ubiquitin-protein ligase E3A-like isoform X3 [Heterocephalus glaber]

Length: 874 aa      View alignments
>XP_004872236.1
MATASKRSPGEPQSDDIEASRMKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFLRMDNNAAAIKALELYKINAKLCDPHPSKKGASSAYLENSKGAPNNSEIKMNKKDGKGARIDFKDVTYLTEELVYEILEICREREDYSPLIRVIGRVFSSAEALVQSFRKVKQHTKEELKSLQGKDEDKDEDEKEKAACSAAAMEEDSEASSSRIVDSSQGDNNLQKLGPDDVSVDIDAIRRVYTRLLSNEKIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSPEYLEMALPLFCKAMSKLPLAAQGKLIRLWSKYSADQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGEERRNKKGPRVDPLETELGVKTLDCRKPLISFEEFINEPLNDVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLHQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYNLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRDSVVIREFWEIVHSFTDDQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML