Details from NCBI annotation

Gene Symbol Hmg20a
Gene Name high mobility group 20A, transcript variant X1
Entrez Gene ID 101722091

Database interlinks

Part of NW_004624894.1 (Scaffold)

For more information consult the page for NW_004624894.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HMG20A ENSCPOG00000011704 (Guinea pig)

Gene Details

high mobility group 20A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010527, Guinea pig)

Protein Percentage 96.54%
CDS Percentage 93.08%
Ka/Ks Ratio 0.07102 (Ka = 0.0168, Ks = 0.2366)

HMG20A ENSG00000140382 (Human)

Gene Details

high mobility group 20A

External Links

Gene Match (Ensembl Protein ID: ENSP00000371133, Human)

Protein Percentage 96.83%
CDS Percentage 91.74%
Ka/Ks Ratio 0.03649 (Ka = 0.0142, Ks = 0.388)

Hmg20a ENSMUSG00000032329 (Mouse)

Gene Details

high mobility group 20A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034879, Mouse)

Protein Percentage 94.51%
CDS Percentage 89.5%
Ka/Ks Ratio 0.04844 (Ka = 0.0254, Ks = 0.5239)

Hmg20a ENSRNOG00000016905 (Rat)

Gene Details

high mobility group 20A (Hmg20a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022976, Rat)

Protein Percentage 95.1%
CDS Percentage 89.05%
Ka/Ks Ratio 0.05041 (Ka = 0.0259, Ks = 0.5148)

Genome Location

Sequence Coding sequence

Length: 1044 bp    Location: 962364..880862   Strand: -
>XM_004872062.1
ATGGAAAGCTTGATGAGTAGTTCTACCTTACCACCCCTTTTTGTAGATGAAGATGCCTCCAAGGAGAGTAATGATCTGGCTACCACTGGATTAACACACCCAGAGGTTCCCTACAGCAGTGGAGCCCCGTCATCCACCAACAACCCTGAGTTTGTGGAGAATCTCTCTCAAGGCCAGCTGCTTCAGAATGAGTCTTCAAATGCTGCAGAAGGCAGCGAGCAGCGGCATGAAGATGAGCAGAGAAGTAAACGAGGAGGTTGGTCCAAAGGGAGAAAGAGGAAGAAACCTCTTCGAGACAGCAATGCACCAAAATCCCCTCTTACAGGATATGTTCGGTTCATGAATGAGCGTCGAGAACAGCTTCGAGCAAAGAGACCAGAAGTCCCGTTTCCAGAAATTACAAGAATGTTAGGCAATGAGTGGAGTAAACTACCTCCTGAGGAAAAGCAGCGCTACCTTGATGAAGCAGACAGAGATAAGGAGCGTTATATGAAGGAACTGGAGCAGTATCAGAAGACTGAGGCCTACAAGGTCTTCAGTAGGAAAACCCAGGACCGGCAGAAAGGCAAATCTCATCGGCAAGATACAGCCCGACAGGCGACCCATGATCATGAGAAAGAAACAGAAGTCAAGGAACGGTCGGTATTTGACATCCCTATATTTACAGAGGAGTTCCTGAACCACAGCAAAGCTCGAGAAGCCGAGCTACGACAGCTCCGAAAGTCCAACATGGAGTTCGAGGAGAGGAATGCAGCCCTGCAGAAGCACGTGGAAAGCATGCGCACAGCTGTGGAGAAGCTGGAAGTGGATGTGATCCAGGAGCGCAGCCGCAACACAGTCCTACAGCAGCACCTGGAGACCCTGCGGCAGGTGCTGACTAGCAGCTTTGCCAGCATGCCCTTGCCTGGAAGTGGCGAAACACCAACAGTGGACACCATTGACTCCTATATGAACAGACTACACAGTATTATTTTAGCGAATCCCCAAGACAATGAAAACTTCATAGCTACAGTACGGGAAGTTGTGAGCAGGCTAGATCGCTAG

Related Sequences

XP_004872119.1 Protein

Hmg20a PREDICTED: high mobility group protein 20A isoform X1 [Heterocephalus glaber]

Length: 347 aa      View alignments
>XP_004872119.1
MESLMSSSTLPPLFVDEDASKESNDLATTGLTHPEVPYSSGAPSSTNNPEFVENLSQGQLLQNESSNAAEGSEQRHEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSHRQDTARQATHDHEKETEVKERSVFDIPIFTEEFLNHSKAREAELRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSSFASMPLPGSGETPTVDTIDSYMNRLHSIILANPQDNENFIATVREVVSRLDR