Details from NCBI annotation

Gene Symbol Syp
Gene Name synaptophysin
Entrez Gene ID 101721729

Database interlinks

Part of NW_004624893.1 (Scaffold)

For more information consult the page for NW_004624893.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYP ENSCPOG00000006941 (Guinea pig)

Gene Details

synaptophysin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006262, Guinea pig)

Protein Percentage 97.38%
CDS Percentage 95.3%
Ka/Ks Ratio 0.06219 (Ka = 0.0118, Ks = 0.189)

SYP ENSG00000102003 (Human)

Gene Details

synaptophysin

External Links

Gene Match (Ensembl Protein ID: ENSP00000263233, Human)

Protein Percentage 97.05%
CDS Percentage 92.35%
Ka/Ks Ratio 0.03675 (Ka = 0.0147, Ks = 0.4004)

Syp ENSMUSG00000031144 (Mouse)

Gene Details

synaptophysin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069429, Mouse)

Protein Percentage 95.74%
CDS Percentage 91.04%
Ka/Ks Ratio 0.0533 (Ka = 0.0223, Ks = 0.418)

Syp ENSRNOG00000010223 (Rat)

Gene Details

synaptophysin (Syp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013724, Rat)

Protein Percentage 95.74%
CDS Percentage 90.71%
Ka/Ks Ratio 0.05139 (Ka = 0.0225, Ks = 0.4378)

Genome Location

Sequence Coding sequence

Length: 918 bp    Location: 942792..929462   Strand: -
>XM_004871998.1
ATGGACGTGGTGAATCAGCTGGTGGCTGGGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTTGGCTTCGTGAAAGTGCTGCAATGGGTCTTTGCCATCTTCGCCTTTGCCACATGCGGCAGCTACGACGGGGAGCTCCGGCTGAGCGTGGAGTGTGCCAACAAGACCGAGAGTGACCTCAGCATTGAGGTTGAATTTGAGTACCCCTTCAGGCTGCACCAAGTGTACTTTGATGCACCCAACTGCCAAGGGGGTACCACCAAGGTCTTCCTAGTGGGGGACTACTCCTCATCAGCTGAATTCTTTGTCACCGTGGCTGTATTTGCCTTCCTCTACTCCATGGGGGCTCTAGCCACCTACATCTTCCTGCAGAACAAGTACCGAGAAAACAACAAAGGGCCCATGCTGGACTTTCTGGCCACTGCGGTGTTTGCCTTCATGTGGCTAGTTAGCTCATCTGCCTGGGCCAAGGGGCTGTCAGATGTGAAGATGGCCACGGACCCAGAGAACATCATCAAAGAAATTGCTGTCTGCCGCCAGGCAGGGAACACGTGCAAGGAGCTGAGGGACCCTGTGACCTCAGGGCTCAACACCTCTGTGGTGTTCGGCTTCCTGAACCTTGTGCTCTGGGTCGGCAATCTATGGTTCGTATTCAAGGAGACAGGCTGGGCCGCTCCATTCCTGCGCGCACCTCCTGGCGCCCCAGAGAAGCAACCGGCACCCGGGGATGCCTATGGCGATGCGGGCTATGGGCAGGGCCCAGGCGGGTATGGGCCCCAGGACTCCTACGGGCCCCAGGGCGGCTACCAGCCCGACTACGGGCAGCCAGCTGGCGGCGGTGGCTACGGGCCCCAGGGCGACTATGGGCAGCAAGGCTACGGCCCACAGGGTGCGCCCACCTCCTTCTCCAATCAGATGTAA

Related Sequences

XP_004872055.1 Protein

Syp PREDICTED: synaptophysin [Heterocephalus glaber]

Length: 305 aa      View alignments
>XP_004872055.1
MDVVNQLVAGGQFRVVKEPLGFVKVLQWVFAIFAFATCGSYDGELRLSVECANKTESDLSIEVEFEYPFRLHQVYFDAPNCQGGTTKVFLVGDYSSSAEFFVTVAVFAFLYSMGALATYIFLQNKYRENNKGPMLDFLATAVFAFMWLVSSSAWAKGLSDVKMATDPENIIKEIAVCRQAGNTCKELRDPVTSGLNTSVVFGFLNLVLWVGNLWFVFKETGWAAPFLRAPPGAPEKQPAPGDAYGDAGYGQGPGGYGPQDSYGPQGGYQPDYGQPAGGGGYGPQGDYGQQGYGPQGAPTSFSNQM