Sequence details NCBI ID: XM_004871973.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gripap1
Gene Name GRIP1 associated protein 1, transcript variant X1
Entrez Gene ID 101714061

Database interlinks

Part of NW_004624893.1 (Scaffold)

For more information consult the page for NW_004624893.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GRIPAP1 ENSCPOG00000013274 (Guinea pig)

Gene Details

GRIP1 associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011950, Guinea pig)

Protein Percentage 83.61%
CDS Percentage 85.34%
Ka/Ks Ratio 0.37948 (Ka = 0.1271, Ks = 0.3348)

GRIPAP1 ENSG00000068400 (Human)

Gene Details

GRIP1 associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000365624, Human)

Protein Percentage 95.24%
CDS Percentage 92.03%
Ka/Ks Ratio 0.08063 (Ka = 0.0244, Ks = 0.3025)

Gripap1 ENSMUSG00000031153 (Mouse)

Gene Details

GRIP1 associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068789, Mouse)

Protein Percentage 92.43%
CDS Percentage 88.3%
Ka/Ks Ratio 0.07811 (Ka = 0.0399, Ks = 0.511)

Gripap1 ENSRNOG00000009071 (Rat)

Gene Details

GRIP1 associated protein 1 (Gripap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012646, Rat)

Protein Percentage 92.17%
CDS Percentage 88.34%
Ka/Ks Ratio 0.08461 (Ka = 0.0415, Ks = 0.4903)

Genome Location

Sequence Coding sequence

Length: 2526 bp    Location: 778539..753111   Strand: -
Raw sequence   
>XM_004871973.1
ATGGCGCAAGCTCTGTCTGAAGAGGAGTTTCAGCGGATGCAGGCTCAGCTCCTGGAACTCCGGACGAACAACTACCAGCTTTCAGATGAACTACGCAAGAGTGGTGTTGAACTTGCCAGTCTTCGACAGAAGGTCGCCTACCTGGATAAGGAGTTCAGTAAAGCTCAGAAGGCACTGAGCAAGAGCAAGAAAGCTCAGGAAGTTGAGGTACTGCTGAGTGAAAATGAGATGCTTCAGGCAAAGCTGCACAGCCAGGAAGAAGACTTCCGTTTGCAGAACAGCACACTTATGGCCGAATTCAGCAAGCTCTGCAACCAGATTGAGCAGCTGGAGCAGGAGAATCAGCAACTGAAGGAAGGAGCTACTGGAGCAGGGGCCGTCCAAGCTGGCCCCCATGTGAATGGGGAGCTATTGAGACTGCAAGCAGAGAACACAGCCTTACAGAAGAATGTGGCAGCCCTGCAGGAGCGCTATGGAAAAGAGGCTGTGAAGTTCTCAATTGTCAGTGAAGGCCAAGGGGACCCTGCAGGGAGCCTGGACCCCACTGTCCATACCCCCATGCCATTGGCAGAGGTAGAGCTGAAATGGGAAATGGAGAAAGAGGAAAAGAGATTGCTCTGGGAGCAGCTGCAAGGCTTGGAGAGCTCAAAGCAGGCTGAAACGTCGAGGCTGCAGGAGGAACTTGCTAAGCTCTCTGAGAAACTCAAAAAGAAACAAGAAAGTTTTTGCCATCTGCAGTCAGAAAAGGAGGCACTATTTAATGACAGCAGGAACAAGATCGAGGAGTTGCAACAGCGGAAGGAAGCAGAACTCAAAGCCCAATTGGCTTGCACCCAGAAGCTACAGCAGGAACTTGAGGCTGCCAATCAAAGTTTGGCAGAGCTAAGAGATCAGCGGCAGGGGGAGCGCCTGGAGCATGCAGCAGCTTTGCGGGCCCTACAGGATCAGGTGTCTATCCAGAGTGCAGATGCGCAGGAACAAGTGGAAGGGCTGTTGGCTGAGAATAATGCCTTGAGGACTAGCCTGGCTGCCCTGGAGCAGATCCAAACAGCAAAGACACAAGAACTGAATGTACTCCGGGAACAGACCACTGGGCTGACAGCTGAGTTACAGCAACGGCAGGCTGAGTACGAAGATCTTATGGGACAGAAAGATGACCTCAACTCCCAGCTCCAGGAGTCACTACGAGCCAATAGTCGGTTGCTGGAACAACTTCAGGAAATAGGTCAGGAGAAGGAGCAGTTGACCCAGGAACTCCAGGAGGCTCGTAAGAGTGCTGAGAAGCGGAAGGCCATGCTAGATGAGCTAGCAATGGAAACACTGCAGGAGAAGTCTCAGCACAAGGAAGAGCTGGGCACAGTCCGACTCCGGCATGAGAAGGAGGTGCTAGGGGTGCGTGCCCGCTATGAGCGTGAGCTCCGAGAACTGCATGAGGACAAGAAACGACAGGAGGAGGAGCTCCGTGGGCAGATCCGGGAAGAGAAGGCCCGGACACGGGAGCTGGAAAATCTCCAGCAGACAGTAGAAGAACTTCAAGCTCAGGTGCATTCCATGGATGGAGCCAAGGGCTGGTTTGAACGTCGCTTGAAGGAAGCTGAGGAATCCTTGCAGCAGCAACAGCAGGAACAAGAGGAAACCCTTAAGCAATGCCGGGAACAGCATGCTGCTGAGCTGAAGGGCAAGGAGGAGGAGCTAAAGAGTGTGCGGGATCAGCTCCAGCAAGCCCAGGAGGAGCGAGATGACCATCTGAAGACCATCACCAGCCTGAAGCAGGAGGTAAAGGACACAGTGGATGGGCAGCGGATCCTGGAGAAGAAGGGCAGTGCTGGGCTCAAGGATCTCAAGCGGCAGCTGCACCTGGAGCGGAAACGGGCTGACAAACTGCAGGAGCGGCTGCAGGACATCCTCACTAACAGCAAGAGCCGCTCAGGCCTTGAGGAGCTGGTTCTCTCTGAAATGAATTCACCAAGCCGGACCCAGACAGGGGACAGCAGTAGCATCTCCTCCTTCAGCTACCGGGAGATCTTACGGGAGAAGGAGAGCTCAGCTGCGCCAGCCAGGTCCTTATCCAGCAGCCCTCAGGCCCAGCCCCCTCGGCCAGCAGAGCTGTCAGACGAGGAAGTGGCTGAGCTCTTTCAGCGCCTGGCAGAGACGCAGCAGGAGAAATGGATGCTGGAAGAGAAGGTAAAACACCTGGAGGTGAGCAGCGCCTCCATGGCAGAGGACCTTTGCCGGAAGAGTGCCATCATTGAGACCTATGTCATGGACAGCCGCATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGCAGTGGGCTGGGCAGCGTCCTGAGAGACCTAGTGAAGCCCGGCGATGAGAACCTTCGGGAGATGAACAAGAAGCTGCAGAACATGCTGGAGGAACAGCTCACCAAGAATATGCACTTGCATAAGGACATGGAAGTTCTGTCCCAGGAAATTGTTCGGCTCAGCAAGGAGTTCGTGGGGTCTCCTGACCCTGACCTAGAGCCAAGAGAAACCAACTAG

Related Sequences

XP_004872030.1 Protein

Gripap1 PREDICTED: GRIP1-associated protein 1 isoform X1 [Heterocephalus glaber]

Length: 841 aa      View alignments
>XP_004872030.1
MAQALSEEEFQRMQAQLLELRTNNYQLSDELRKSGVELASLRQKVAYLDKEFSKAQKALSKSKKAQEVEVLLSENEMLQAKLHSQEEDFRLQNSTLMAEFSKLCNQIEQLEQENQQLKEGATGAGAVQAGPHVNGELLRLQAENTALQKNVAALQERYGKEAVKFSIVSEGQGDPAGSLDPTVHTPMPLAEVELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAKLSEKLKKKQESFCHLQSEKEALFNDSRNKIEELQQRKEAELKAQLACTQKLQQELEAANQSLAELRDQRQGERLEHAAALRALQDQVSIQSADAQEQVEGLLAENNALRTSLAALEQIQTAKTQELNVLREQTTGLTAELQQRQAEYEDLMGQKDDLNSQLQESLRANSRLLEQLQEIGQEKEQLTQELQEARKSAEKRKAMLDELAMETLQEKSQHKEELGTVRLRHEKEVLGVRARYERELRELHEDKKRQEEELRGQIREEKARTRELENLQQTVEELQAQVHSMDGAKGWFERRLKEAEESLQQQQQEQEETLKQCREQHAAELKGKEEELKSVRDQLQQAQEERDDHLKTITSLKQEVKDTVDGQRILEKKGSAGLKDLKRQLHLERKRADKLQERLQDILTNSKSRSGLEELVLSEMNSPSRTQTGDSSSISSFSYREILREKESSAAPARSLSSSPQAQPPRPAELSDEEVAELFQRLAETQQEKWMLEEKVKHLEVSSASMAEDLCRKSAIIETYVMDSRIDVSVAAGHTDRSGLGSVLRDLVKPGDENLREMNKKLQNMLEEQLTKNMHLHKDMEVLSQEIVRLSKEFVGSPDPDLEPRETN