Details from NCBI annotation

Gene Symbol Scmh1
Gene Name sex comb on midleg homolog 1 (Drosophila), transcript variant X6
Entrez Gene ID 101715938

Database interlinks

Part of NW_004624892.1 (Scaffold)

For more information consult the page for NW_004624892.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCMH1 ENSCPOG00000003397 (Guinea pig)

Gene Details

sex comb on midleg homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003071, Guinea pig)

Protein Percentage 90.32%
CDS Percentage 91.83%
Ka/Ks Ratio 0.41123 (Ka = 0.0596, Ks = 0.1448)

SCMH1 ENSG00000010803 (Human)

Gene Details

sex comb on midleg homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000386079, Human)

Protein Percentage 94.7%
CDS Percentage 93.23%
Ka/Ks Ratio 0.13034 (Ka = 0.0269, Ks = 0.2061)

Scmh1 ENSMUSG00000000085 (Mouse)

Gene Details

sex comb on midleg homolog 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000101908, Mouse)

Protein Percentage 92.92%
CDS Percentage 91.52%
Ka/Ks Ratio 0.15084 (Ka = 0.038, Ks = 0.2518)

Scmh1 ENSRNOG00000032183 (Rat)

Gene Details

sex comb on midleg homolog 1 (Drosophila) (Scmh1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051099, Rat)

Protein Percentage 92.77%
CDS Percentage 91.32%
Ka/Ks Ratio 0.14101 (Ka = 0.0377, Ks = 0.2675)

Genome Location

Sequence Coding sequence

Length: 1998 bp    Location: 544811..435145   Strand: -
>XM_004871799.1
ATGCTGGTTTGCTACAGTGTTTTAGCTTGTGAGAGTCTCTGGGACCTTCCCTGCTCCATCATGGGGTCACCTCTAGGTCGTTTTACCTGGGACAAATACCTAAAAGAAACATGTTCAGTCCCAGCGCCTGTCCATTGCTTCAAGCAGTCCTATACACCTCCAACCAATGAGTTCAAGATCAGCATGAAATTGGAAGCACAAGACCCCAGAAACACCACATCCACCTGTATTGCCACAGTAGTTGGACTGACGGGTGCCCGCCTCCGTCTGCGACTTGATGGCAGTGACAACAAGAATGACTTCTGGCGGCTGGTTGACTCAGCTGAAATCCAGCCTGTTGGGAACTGTGAGAAGAATGGGGGGATGCTACAGCCCCCTCTGGGATTTCGGCTGAATGCCTCCTCCTGGCCTATGTTCCTTTTGAAGACACTAAACGGAGCAGAGATGGCTCCCATCAGGATTTTCCACAAGGAGCCACCATCACCTTCCCACAACTTCTTCAAAATGGGAATGAAACTAGAAGCAGTGGACAGGAAGAACCCTCATTTTATTTGCCCAGCCACTATTGGGGAGGTTCGGGGCTCAGAGGTGCTTGTCACTTTTGATGGGTGGCGAGGAGCCTTTGACTACTGGTGCCGCTTCGATTCCCGGGACATCTTTCCTGTGGGCTGGTGTTCCTTGACTGGAGACAACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAAGAATCCCTACCCTGCATCTGATGTGAACATTGAGAAGCCCAGCATCCACAGCAACACCAAAACTGTCTTGAAGCATCAACCAGGGCAGAGGGGGCGTAAACCAGGAAAGAAGCGGGGCCGAACACCCAAGACCCTTATTCCCCATCCCATCTCTACCCCATCAAAGTCAGCTGAAACTTTGAAATTCCCAAAGAAGAGAGGTCCCAAACCTGGCAGTAAGAGGAAACCTCGGACTTTGCTGAGCCTACCACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCCCAAGATGCTGCCACCATCCCCAGCTCAGCCATGCAGGCCCCCACAGTCTGTATCTACTTGAACAAGAGTGGCAGCACAGGCCCCCACTTGGATAAAAAGAAGGTCCAGCAGCTCCCTGACCACTTTGGGCCAGCACGTGCCTCTGTGGTGTTGCAGCAAGCAGTCCAGGCTTGCATCGACTGTGCTTACCACCAGAAAACTGTCTTCAGCTTCCTCAAACAGGGCCATGGTGGCGAGGTCATCTCAGCCGTGTTTGACCGGGAACAGCACACTCTCAACCTCCCAGCAGTCAACAGCATCACCTACGTCCTCCGCTTCCTGGAGAAGCTCTGCCGCAACCTTCATAGTGACAATCTGTTTGGCAACCAGCCCTTTACACAGACTCACTTATCATTCACTGCCACAGAATACAGCCACAGCCACGACAGGTACCTACCAGGTGAAACCTTTGTCCTTGGGAATAGTCTGCCTCGGTCCTTGACACCACACTCAGACTCAATGGACTCTGCGTTGAATACCAACAAACTTGTCAGCTCCTCCCCAAATCTTCGAGTTCCTGCTTACCGGCCTTTGCTTCCCTCCTGTGGCCTTCCACAGAACACTGCTTCAGCTGTGCGCAGGCTGTGCTCCAGAGGAGTGTTAAAAGGATCAAATGAAAGAAGGGATATGGAATCATTTTGGAAACTAAATCATTCCCCAGGGTCAGACCGATACCTGGAAAGCCGAGATGCCTCTCGACTGAGTGGCCGGGACCCCTCCTTGTGGACAGTTGAGGATGTGATGCAGTTTGTCCGGGAAGCCGATCCTCAGCTTGGACCCCATGCTGACCTTTTCCGCAAACATGAGATCGATGGCAAGGCCCTGCTTCTGCTGCGCAGTGACATGATGATGAAGTACATGGGGCTGAAGCTGGGGCCAGCGCTCAAGCTCTCCTTTCACATTGACCGGCTGAAGCAGGGCAAGTTCTAA

Related Sequences

XP_004871856.1 Protein

Scmh1 PREDICTED: polycomb protein SCMH1 isoform X6 [Heterocephalus glaber]

Length: 665 aa      View alignments
>XP_004871856.1
MLVCYSVLACESLWDLPCSIMGSPLGRFTWDKYLKETCSVPAPVHCFKQSYTPPTNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPVGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNIEKPSIHSNTKTVLKHQPGQRGRKPGKKRGRTPKTLIPHPISTPSKSAETLKFPKKRGPKPGSKRKPRTLLSLPPTSPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKSGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCRNLHSDNLFGNQPFTQTHLSFTATEYSHSHDRYLPGETFVLGNSLPRSLTPHSDSMDSALNTNKLVSSSPNLRVPAYRPLLPSCGLPQNTASAVRRLCSRGVLKGSNERRDMESFWKLNHSPGSDRYLESRDASRLSGRDPSLWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSFHIDRLKQGKF