Details from NCBI annotation

Gene Symbol Rftn2
Gene Name raftlin family member 2, transcript variant X1
Entrez Gene ID 101704356

Database interlinks

Part of NW_004624889.1 (Scaffold)

For more information consult the page for NW_004624889.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RFTN2 ENSCPOG00000010463 (Guinea pig)

Gene Details

raftlin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009395, Guinea pig)

Protein Percentage 67.29%
CDS Percentage 73.22%
Ka/Ks Ratio 0.22058 (Ka = 0.2329, Ks = 1.0558)

RFTN2 ENSG00000162944 (Human)

Gene Details

raftlin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000295049, Human)

Protein Percentage 58.42%
CDS Percentage 61.47%
Ka/Ks Ratio 0.17505 (Ka = 0.3347, Ks = 1.9119)

Rftn2 ENSMUSG00000025978 (Mouse)

Gene Details

raftlin family member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027121, Mouse)

Protein Percentage 59.12%
CDS Percentage 63.66%
Ka/Ks Ratio 0.18497 (Ka = 0.3357, Ks = 1.8148)

Rftn2 ENSRNOG00000015594 (Rat)

Gene Details

Protein Rftn2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020910, Rat)

Protein Percentage 58.39%
CDS Percentage 63.15%
Ka/Ks Ratio 0.20231 (Ka = 0.3463, Ks = 1.7116)

Genome Location

Sequence Coding sequence

Length: 1479 bp    Location: 2644400..2697383   Strand: +
>XM_004871693.1
ATGGGGTGCGGACTCAGGAAGCTCGGGGACCCCGAGGACAGCAGCCCTGGGAAAATCTTTTCCACCCTCAAGAGACCGCAAGTGGAAACAAAGACGGACTTGGCTTATGAGTACGTGCTGCTGGATTTCTCTCTGCAAGCCCCGTCAAACCCGGAGGTGATCAGGATAAACTCGATCGTGGACATAGCAGCCAAAGTGGAGGACTATTACCTCCAGGGCTACGTGGTGGGGGCCCTGCACCCCATCCTGCACCCCGCAGGCCCGCGAGTACCCCTGCCTGCGAGTCACCTGTACCGAGCGGTGCTGCTGCGGCCCAAAGCCAGCCCCAAGCGGCCGGCAGCACCCAGCACACAGAGGCACCCACGGCTGGTCATTGAGGAGTGTCCCATCCCAGAGGACATGCAGGCCAGAGATATCGCCAAGGAGCTGATACAGAAGATCAACGCTGCTGCCCGCAGAGGAATGCGGTTCGTGGGCTTCACTCCGCAGCTGCGTGCCCCACCCAGGTGCTGCAACGAGGCCGGCCGGGACGCTGGTGCGGAGCCGGACGACAGCTGGCCGGGCCGGGGCAAGGGGCCGGGCAGCGGGCCGGTGTGGGAAGGTGACCCTGGGGAGGAGTCCCGCCGGGAGGGCGACGGCAGCCCCAGCCCCTCCACGCCAAGGAAGGGAGAAGAGAGCATGCTGTATGCGGTCTTCAATGCTTTCGAGGACACCCCAGCCTGCTGGAGCTACCAGGAGGGTGTGCTGTCACTGAAGGTGACCAGGAAGGGCGCTGTCCTCAGCACGCTGGACGCCGACTGGCTGGAGCTGACCATGTTTTATTACAAGCAGGGCTTGTCCTTGATCGACTCCTTCGTGTGCTGGGATTCACCGAAAGGGGACCACTTGCCGAAATCTCTGGAGGGATTTTTTATCTACGAGGAGGAAGGCTCCGGGCTTCCAGGGTCTCCCAGGAGAGAGAACGATGCCATCGTGGTGGAGCAGTGGACAGTCATCGAGGGCACTGCCGTCAAGGCGGACTACGGCCCCCTGCTGCACACCCTGGCCGAGTTCGGATGGCTGCTGACCAGCGTGCTGCCCACGCCCCTGCTGAGGCGCGACAGGGAGGGGAACCTGGCCACGAAGCAGGTCGTCTTCCTGCAGCGGTCGGCGGCGCGGCCCGGCGCGCGCGCCCCCGAGGCATCCCCTTCTGCCCTACCAGGAAGAGGACACGGCTCACACTGGCCTGACTCTGCAAAAACAGACCTCACTGCTGTGACCACGGGGTTCACCTTCCCACGGCTCACTGCCCGGATGTACCCTTGTTGGCAAAGTGGAGCTGCCCCAGGCCTTCTTCTCAAACCACTTTGTGTTTTCCTTCTTTGTTCAAGGCCCTGTGCCTGCTGCCGACCTGCCTTGCGTTCGTTTATTCACTCAAAGGCTGAGCGCCTGAACTTAGGAAGGCAGAGGGGAGAGCGTCCCTCCCCCTGGCTCTGGTGA

Related Sequences

XP_004871750.1 Protein

Rftn2 PREDICTED: raftlin-2 isoform X1 [Heterocephalus glaber]

Length: 492 aa      View alignments
>XP_004871750.1
MGCGLRKLGDPEDSSPGKIFSTLKRPQVETKTDLAYEYVLLDFSLQAPSNPEVIRINSIVDIAAKVEDYYLQGYVVGALHPILHPAGPRVPLPASHLYRAVLLRPKASPKRPAAPSTQRHPRLVIEECPIPEDMQARDIAKELIQKINAAARRGMRFVGFTPQLRAPPRCCNEAGRDAGAEPDDSWPGRGKGPGSGPVWEGDPGEESRREGDGSPSPSTPRKGEESMLYAVFNAFEDTPACWSYQEGVLSLKVTRKGAVLSTLDADWLELTMFYYKQGLSLIDSFVCWDSPKGDHLPKSLEGFFIYEEEGSGLPGSPRRENDAIVVEQWTVIEGTAVKADYGPLLHTLAEFGWLLTSVLPTPLLRRDREGNLATKQVVFLQRSAARPGARAPEASPSALPGRGHGSHWPDSAKTDLTAVTTGFTFPRLTARMYPCWQSGAAPGLLLKPLCVFLLCSRPCACCRPALRSFIHSKAERLNLGRQRGERPSPWLW