Details from NCBI annotation

Gene Symbol Synpr
Gene Name synaptoporin, transcript variant X2
Entrez Gene ID 101705786

Database interlinks

Part of NW_004624888.1 (Scaffold)

For more information consult the page for NW_004624888.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYNPR ENSCPOG00000012817 (Guinea pig)

Gene Details

synaptoporin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011537, Guinea pig)

Protein Percentage 94.34%
CDS Percentage 91.67%
Ka/Ks Ratio 0.10902 (Ka = 0.0315, Ks = 0.2889)

SYNPR ENSG00000163630 (Human)

Gene Details

synaptoporin

External Links

Gene Match (Ensembl Protein ID: ENSP00000418994, Human)

Protein Percentage 91.15%
CDS Percentage 86.79%
Ka/Ks Ratio 0.09473 (Ka = 0.0493, Ks = 0.5209)

Synpr ENSMUSG00000056296 (Mouse)

Gene Details

synaptoporin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064986, Mouse)

Protein Percentage 90.38%
CDS Percentage 85.26%
Ka/Ks Ratio 0.0789 (Ka = 0.0516, Ks = 0.6546)

Synpr ENSRNOG00000008203 (Rat)

Gene Details

synaptoporin (Synpr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011307, Rat)

Protein Percentage 94.62%
CDS Percentage 87.56%
Ka/Ks Ratio 0.04329 (Ka = 0.0255, Ks = 0.5888)

Genome Location

Sequence Coding sequence

Length: 783 bp    Location: 2462767..2317519   Strand: -
>XM_004871613.1
ATGTGTATGGTGATATTTGCTCCGCTTTTTGCGATCTTTGCATTTGCAACATGCGGTGGCTATTCTGGAGGCCTGAGGCTGAGTGTGGACTGTGTCAACAAGACGGAAAGTAACCTCAGCATCGACGTCGCCTTCGCCTACCCCTTCAGGTTGCACCAGGTGACCTTCGAGGTACCCACCTGTGAGGGGAAGGGACAGCAGAAGCTGGCGCTTATTGGCGACTCCTCATCTTCGGCAGAGTTCTTCGTCACCGTGGCTGTCTTCGCCTTCCTCTACTCGCTGGCTGCCACTGTCGTTTACATTTTCTTCCAGAACAAGTACCGGGAGAACAACCGGGGCCCACTGATTGACTTCGTTGTAACTGTGGTTTTCTCATTCTTGTGGCTGGTGGGTTCATCTGCTTGGGCAAAAGGGCTGTCTGATGTCAAAGTTGCAACAGACCCCAAAGAAGTCTTGTTATTAATGTCAGCTTGCAAGCAGCCAGCTAACAAGTGCATGGCGGTCCACAGCCCCGTCATGTCCAGCTTAAACACCTCTGTGGTATTTGGATTCTTGAACTTTATACTCTGGGCTGGAAACATATGGTTTGTTTTCAAGGAGACCGGCTGGCATTCCTCGGGACAGAGGTACCTTTCGGACCCAATGGAAAAGCACTCCAGCAGCTACAACCAAGACAGCTACGGGTCGGGCGGTGGGTACAGCCAGCAGGGGAGTGTGGGGCCATCCTCTGAGGAGTTTGGCCAGCCAGCCAGCGGCCCTACTTCCTTCACCAATCAGATTTAA

Related Sequences

XP_004871670.1 Protein

Synpr PREDICTED: synaptoporin isoform X2 [Heterocephalus glaber]

Length: 260 aa      View alignments
>XP_004871670.1
MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDVAFAYPFRLHQVTFEVPTCEGKGQQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFVVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPANKCMAVHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQDSYGSGGGYSQQGSVGPSSEEFGQPASGPTSFTNQI