Details from NCBI annotation

Gene Symbol Psmd6
Gene Name proteasome (prosome, macropain) 26S subunit, non-ATPase, 6, transcript variant X1
Entrez Gene ID 101703034

Database interlinks

Part of NW_004624888.1 (Scaffold)

For more information consult the page for NW_004624888.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMD6 ENSCPOG00000006160 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005556, Guinea pig)

Protein Percentage 97.94%
CDS Percentage 89.55%
Ka/Ks Ratio 0.01457 (Ka = 0.0091, Ks = 0.627)

PSMD6 ENSG00000163636 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000295901, Human)

Protein Percentage 97.69%
CDS Percentage 88.77%
Ka/Ks Ratio 0.02009 (Ka = 0.0119, Ks = 0.5941)

Psmd6 ENSMUSG00000021737 (Mouse)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022256, Mouse)

Protein Percentage 96.92%
CDS Percentage 85.69%
Ka/Ks Ratio 0.01402 (Ka = 0.0141, Ks = 1.0046)

Psmd6 ENSRNOG00000006751 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (Psmd6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009249, Rat)

Protein Percentage 96.92%
CDS Percentage 86.46%
Ka/Ks Ratio 0.01605 (Ka = 0.0141, Ks = 0.879)

Genome Location

Sequence Coding sequence

Length: 1170 bp    Location: 1883357..1903011   Strand: +
>XM_004871604.1
ATGCCGCTGGAGAACCTGGAGGAGGAGGGGCTGCCCAAGAACCCCGACCTGCGCATCGCGCAGCTGCGCTTCCTGCTGAGCCTGCCGGAGCACCGCGGGGACGCGGCGGTGCGCGCCGAGCTGATGGCGGCCGTGCGCGACAACGACATGGCGCCGTACTACGAGGCCTTGTGCAAGTCACTGGACTGGCAGGTGGACGTGGACCTGGTCGGCAAGATGAAGAAGGCGAACGAAGAAGAGTTGAAGCGCTTGGACGAGGAGCTGGAGGATGCGGAGAAGAACCTGGGGGAGAGCGAGATCCGAGACGCCATGATGGCGAGGGCCGAGTACCTCTGCCGGATAGGTGACAAGGAGGGAGCTCTGACGGCCTTTCGGAAGACTTACGACAAGACAGTGGCCCTGGGCCACAGGCTGGATATTGTGTTCTATCTCCTTAGAATTGGTCTGTTTTACATGGACAGTGATCTCATCACCCGGAACACAGAAAAGGCCAAAAGCTTAATAGAGGAAGGAGGAGACTGGGACAGGAGGAACCGCCTGAAAGTGTACCAGGGTCTCTACTGTGTGGCTATCCGTGACTTCAAACAGGCAGCCGAGCTCTTTCTGGACACTGTTTCAACATTTACATCCTATGAGCTTATGGATTACAAGACGTTTGTGACTTACACTGTCTATGTCAGCATGATTGCCCTGGAAAGACCAGATCTCAGGGAAAAGGTCATTAAAGGAGCGGAGATTCTGGAAGTGCTGCACAGCCTCCCGGCAGTCCGGCAGTATCTGTTTTCACTCTACGAATGTCGATACTCGGTGTTCTTCCAGTCATTAGCGGTTGTGGAACAGGAAATGAAACAGGACTGGCTTTTCGCGCCTCATTATCGATACTATGTCAGAGAAATGCGGATCCACGCCTACAGCCAACTGCTGGAGTCCTACCGCTCTTTAACCCTGGGCTACATGGCTGAGGCATTCGGGGTGGGCGTGGAATTCATTGACCAGGAACTGTCCAGGTTTATTGCTGCTGGAAGACTACACTGCAAAATAGATAAAGTGAATGAAATAGTAGAAACCAACAGACCTGATAGCAAGAACTGGCAGTACCAAGAAACTATCAAGAAAGGAGATCTGCTGCTAAACAGAGTTCAGAAACTTTCCAGAGTGATTAATATGTAA

Related Sequences

XP_004871661.1 Protein

Psmd6 PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 isoform X1 [Heterocephalus glaber]

Length: 389 aa      View alignments
>XP_004871661.1
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRAELMAAVRDNDMAPYYEALCKSLDWQVDVDLVGKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMARAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDSDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKQDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM