Sequence details NCBI ID: XM_004871603.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prickle2
Gene Name prickle homolog 2 (Drosophila), transcript variant X3
Entrez Gene ID 101702207

Database interlinks

Part of NW_004624888.1 (Scaffold)

For more information consult the page for NW_004624888.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRICKLE2 ENSCPOG00000001310 (Guinea pig)

Gene Details

prickle homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001189, Guinea pig)

Protein Percentage 90.63%
CDS Percentage 88.65%
Ka/Ks Ratio 0.05494 (Ka = 0.0441, Ks = 0.8024)

PRICKLE2 ENSG00000163637 (Human)

Gene Details

prickle homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000295902, Human)

Protein Percentage 88.02%
CDS Percentage 83.75%
Ka/Ks Ratio 0.05385 (Ka = 0.0617, Ks = 1.146)

Prickle2 ENSMUSG00000030020 (Mouse)

Gene Details

prickle homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032093, Mouse)

Protein Percentage 86.95%
CDS Percentage 81.93%
Ka/Ks Ratio 0.04881 (Ka = 0.0669, Ks = 1.3707)

Prickle2 ENSRNOG00000012364 (Rat)

Gene Details

prickle homolog 2 (Drosophila) (Prickle2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016628, Rat)

Protein Percentage 87.07%
CDS Percentage 82.13%
Ka/Ks Ratio 0.04819 (Ka = 0.0656, Ks = 1.3613)

Genome Location

Sequence Coding sequence

Length: 2547 bp    Location: 1693162..1822235   Strand: +
Raw sequence   
>XM_004871603.1
ATGGTGACCGTGATGCCTCTGGAGATGGAGAAAACCATCAGCAAGCTCATGTTTGACTTCCAGAGGAACTCGACCTCAGACGACGACTCGGGCTGCGCCCTGGAGGAGTACGCCTGGGTCCCGCCGGGGCTGAAGCCCGAGCAGGTACACCAGTACTACAGCTGCCTCCCTGAAGAGAAGGTCCCTTATGTCAACAGCCCTGGAGAGAAACTGCGAATCAAGCAGCTCCTCCACCAGCTGCCGCCGCACGACAATGAGGTCCGATACTGCAACTCCCTGGATGAGGAGGAGAAGAGGGAGCTGAAGCTGTTCAGCAACCAGCGGAAACGTGAGAACCTGGGCCGAGGGAATGTCAGGCCCTTCCCCGTCACCATGACCGGCGCTATCTGCGAGCAGTGCGGAGGCCAGATTAACGGCGGGGACATCGCTGTGTTCGCATCTCGCGCTGGCCACGGTGTCTGCTGGCACCCGCCCTGCTTCATATGCACCGTCTGCAGTGAGCTCCTGGTGGATCTGATCTACTTCTACCAAGATGGGAAGATCTACTGTGGACGGCACCACGCCGAGTGCCTGAAGCCGCGCTGTGCCGCCTGCGACGAGATCATCTTCGCTGACGAATGCACAGAAGCTGAGGGGCGGCACTGGCACATGAAACATTTCTGCTGCTTCGAGTGTGAGACAGTGCTGGGTGGCCAGCGCTACATCATGAAGGAAGGAAGGCCCTACTGCTGCCACTGCTTCGAGTCCTTGTATGCAGAGTATTGCGACACCTGTGCCCAGCACATAGGGATCGACCAGGGTCAGATGACCTACGACGGCCAACACTGGCACGCCACTGAGACCTGTTTCTGCTGTGCTCACTGCAAGAAGTCCCTCCTGGGCCGGCCGTTCCTCCCGAAGCAGGGCCAGATATTTTGCTCCCGAGCCTGCAGTGCCGGTGAGGACCCCAATGGCTCCGACTCCTCCGATTCGGCCTTCCAGAATGCCAGAGCCAAGGAGTCCCGACGCAGCGCCAAGATCGGCAAGAACAAGAGCAAGACAGAGGAGGCCGTGCTGAGCCAGCACGGCCAGCTGCAGGCAAGCTCGGTCCGGCTGTCGGCCGACGTAGACCCCCTGTCCCTACAGATGGACCTGCTCAGCCTGTCCAGCCAGACACCCAGCCTCAACCGGGACCCTATCTGGCGGGGCCGGGACGAGCCCTACCACTACGGGAACAAGATGGAGCAGGGCCAGGCCCAGAGCCCTCTGCAGCTGCTCAGCCAGTGCAGCATGAGGACTTCCTACAGCCCAGGGGCGCAGGGCGCGGGAGCCCAGCCCGACGTGTGGCCCCAGCATTTCAGCAACCCCAAGAGGGGCTCGGCGCTGGCCATGAAGGGGCACGGTGGCAGCTTCCTCAAGGAGTGCCGTGAGGACTACTACGGTGCGCGGCTGCGGTCCCAGGAGAGCTACAGCGACATGTCCAGCCAGGGCTTCGGCGAGGCCCGGGGTGGCATCCAGGTGCCCCAGTACGAGGAGACGGAGGACGGCGGGGGTGCGGCCACCCAGCAGTGCCGGCCGCGCCACCCACTCGGCGCCCTGCAGTACACGGAGGACAGGACGCCCGCGGAGCAGACCCCTCGGGGCTCCATGGACTCGCTGGCCCTGTCCAACACAACAGGTTTCTCCGCGGAAGGCGGGGCCAAGCGCCAGGAGCACCTGTCGCGGTTTTCCATGCCGGACCTCAGCAAAGACTCGGGAATGAACGTGTCCGAGAAGCTGAGCACCCTGGGTACCCTCAACTCGTCCGTGCAGTTCCGGAGCGCCGAGTCGGTGCGCAGCCTGCTGTCGGCGCAGCAGTACCAGGAGGCAGACGGCGGCCTCCGCCAGCTCGGCGCCCCCGCGGGGTACCGGGACCTGCAGGCCCGCGGGCGCAGGCACCAGAGCTTCGACTTCGACGCGGGGCTGGCGGGCGGCCCGCTGCCCGGCCCCGAGGCGGCGCGGCTGCAGCCCCTGAGCGAGCGCACGCGGCGCCGGGCCTCCCCGCGCGACCCCGAGGCGCGCCGCCCGCGCACGCACGCGCATGCGCACCGCCCCCGCCGCTCGCGCCGCTCGCGCTCAGACAACGCGCTGCACCTGGCCGGCGAGCGCGAGGCACTGTCCCGCCTGAAGGGGCGGCCGGGCCTGCGCGCCCGCGAGGACTGCGAGCCGTTCGCGCGCCAGCGCAGCTTCCAGGGCAGCCCGGGCCCGGGCGGCCGCCGGGACCTGTGCGGCCAGTGCCCCCGGACCGTGTCGGACCTGGCGCTGCAGAACGCCGTCGGGGAGCGCTGGGCGCCCTGCTTCGCCGAGTACGACTGGTGCTCCACCTGCTCGTCCTCCTCCGAGTCCGACAACGAGGGCTTCTTCCTCGGCGAGCCCATTCCGCAGCCGGCGCGCCTGCGCTACGTCACCAGCGACGAGCTGCTGCACAAGTACGGCTCCTACGGGGTCCCCAAGGCCTCCACCTTGGGGGGCCGGGGGCAGCTGCACGGCAGGAAAAGACAGAAGAGCAAAAACTGCATCATTTCCTAG

Related Sequences

XP_004871660.1 Protein

Prickle2 PREDICTED: prickle-like protein 2 isoform X3 [Heterocephalus glaber]

Length: 848 aa      View alignments
>XP_004871660.1
MVTVMPLEMEKTISKLMFDFQRNSTSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRIKQLLHQLPPHDNEVRYCNSLDEEEKRELKLFSNQRKRENLGRGNVRPFPVTMTGAICEQCGGQINGGDIAVFASRAGHGVCWHPPCFICTVCSELLVDLIYFYQDGKIYCGRHHAECLKPRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCHCFESLYAEYCDTCAQHIGIDQGQMTYDGQHWHATETCFCCAHCKKSLLGRPFLPKQGQIFCSRACSAGEDPNGSDSSDSAFQNARAKESRRSAKIGKNKSKTEEAVLSQHGQLQASSVRLSADVDPLSLQMDLLSLSSQTPSLNRDPIWRGRDEPYHYGNKMEQGQAQSPLQLLSQCSMRTSYSPGAQGAGAQPDVWPQHFSNPKRGSALAMKGHGGSFLKECREDYYGARLRSQESYSDMSSQGFGEARGGIQVPQYEETEDGGGAATQQCRPRHPLGALQYTEDRTPAEQTPRGSMDSLALSNTTGFSAEGGAKRQEHLSRFSMPDLSKDSGMNVSEKLSTLGTLNSSVQFRSAESVRSLLSAQQYQEADGGLRQLGAPAGYRDLQARGRRHQSFDFDAGLAGGPLPGPEAARLQPLSERTRRRASPRDPEARRPRTHAHAHRPRRSRRSRSDNALHLAGEREALSRLKGRPGLRAREDCEPFARQRSFQGSPGPGGRRDLCGQCPRTVSDLALQNAVGERWAPCFAEYDWCSTCSSSSESDNEGFFLGEPIPQPARLRYVTSDELLHKYGSYGVPKASTLGGRGQLHGRKRQKSKNCIIS