Sequence details NCBI ID: XM_004871569.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rbm10
Gene Name RNA binding motif protein 10, transcript variant X3
Entrez Gene ID 101716395

Database interlinks

Part of NW_004624887.1 (Scaffold)

For more information consult the page for NW_004624887.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBM10 ENSCPOG00000002939 (Guinea pig)

Gene Details

RNA binding motif protein 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002670, Guinea pig)

Protein Percentage 96.12%
CDS Percentage 93.36%
Ka/Ks Ratio 0.0943 (Ka = 0.0241, Ks = 0.2554)

RBM10 ENSG00000182872 (Human)

Gene Details

RNA binding motif protein 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000366829, Human)

Protein Percentage 97.84%
CDS Percentage 92.82%
Ka/Ks Ratio 0.02783 (Ka = 0.0101, Ks = 0.3628)

Rbm10 ENSMUSG00000031060 (Mouse)

Gene Details

RNA binding motif protein 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111032, Mouse)

Protein Percentage 95.8%
CDS Percentage 90.91%
Ka/Ks Ratio 0.04953 (Ka = 0.0204, Ks = 0.4125)

Rbm10 ENSRNOG00000008472 (Rat)

Gene Details

RNA binding motif protein 10 (Rbm10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011317, Rat)

Protein Percentage 96.36%
CDS Percentage 90.09%
Ka/Ks Ratio 0.04026 (Ka = 0.0187, Ks = 0.4643)

Genome Location

Sequence Coding sequence

Length: 2811 bp    Location: 3921898..3953739   Strand: +
Raw sequence   
>XM_004871569.1
ATGGAGTATGAACGTCGAGGTGGTCGTGGTGACAGGACCGGCCGCTATGGAGCCACTGACCGCTCACAGGATGATGGTGGGGAGACCCGAAGCCGAGACCATGACTACCGGGACATGGACTACCGGTCATACCCCCGCGAGTATGGCAGCCAAGAGGGCAAGCATGATTATGATGACTCATCCGAGGAACAGAGTGCAGAGGATTCCTACGAGGCCTCCCCGGGCTCCGAGACTCAGCGTAGGCGGCGGCGGCGGCACAGGCACAGCCCCACTGGCCCGCCAGGCTTCCCCCGAGACGGCGACTATCGGGACCAGGACTATCGGACCGAGCAAGGGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGAAGGCCAGTAACATCGTCATGCTGAGGATGCTGCCACAGGCAGCCACTGAGGATGACATCCGTGGCCAGCTGCAGTCCCACGGCGTCCAGGCTCGGGAGGTCCGGCTGATGCGGAACAAATCCTCAGGTCAGAGCCGGGGCTTCGCCTTCGTCGAGTTTAGTCACTTGCAGGACGCTACACGATGGATGGAAGCCAATCAGCACTCCCTCAACATTCTGGGCCAGAAGGTGTCCATGCACTACAGCGACCCCAAGCCCAAGATCAATGAGGACTGGCTGTGCAACAAGTGTGGTGTCCAGAACTTCAAACGCCGAGAGAAGTGCTTCAAATGTGGTGTGCCCAAGTCAGAGGCAGAGCAGAAGCTGCCCCTCGGTGCAAGAATGGATTCACAGGCACTGCCGCTGGGTGGGCGGGAGCTCAGCCAGGGCCTGCTCCCGCTGCCGCAGCCCTACCAGGCTCAGGGAGTGCTGGCCTCTCAGGCCCTCTCACAGGGCTCGGAGCCAAGCTCAGAGAATGCCAACGACACCATCATTTTGCGCAACCTGAACCCACACAGCACTATGGACTCCATCCTGGGGGCCCTGGCGCCCTATGCAGTGCTGTCCTCCTCCAATGTGCGCGTCATCAAGGACAAACAGACGCAACTGAACCGAGGCTTTGCCTTCATCCAGCTCTCCACCATCGAGGCAGCCCAGCTGCTGCAGATCCTGCAGGCCCTGCATCCACCGCTCACCATCGATGGCAAGACCATCAACGTTGAGTTTGCCAAGGGTTCTAAGAGGGACATGGCCTCCAATGAAGGCAGTCGCATCAACGCTGCCTCTGTGGCCAGCACTGCCATTGCTGCAGCCCAGTGGGCCATCTCACAGACCCTCCCACCTACCTCTCAGGCCTCCCAGGGTGGGGAGGGTGCCTGGGCCACCCCCGAGGAGCCACCGGTGGACTACAGCTACTACCAACAGGATGAGAGCTATGGCAGCAGCCAGGGCACAGATTCCCTCTATGGCCATGGCTACCTCAAGGGTACCAAGGGCCCTGGCATCACTGGAACCAAAGGGGACCCAACCGGAGCAGGTCCTGAGGCCTCCCTGGAGTCCGGGTCAGACTCTGTGTCGATACAGGCTTTCTCCCGTGCCCAACCTGGTGCTGCCCCTGGCCTCTATCAACAATCAACAGCTGAAGCAAGCAGCAGCCAGGGCACTGCTGCCAACAGCCAGTCATATACCATCATGTCACCTGCTGTGCTCAAATCTGAGCTCCAGAGCCCCACCCATCCCAGCTCTACCCTACCACCGGCCACCAGCCCCACCACTCAGGAGTCCTACAGCCAGTACCCTGTTCCTGATGTCTCCACCTACCAGTATGATGAGACATCCGGCTACTACTATGACCCTCAGACTGGCCTCTACTATGATCCCAACTCCCAGTATTACTACAATGCTCAGAGCCAGCAGTACCTGTACTGGGATGGGGAGCGGCGGACCTATGTTCCTGCACTGGAGCAGTCAGCCGATGGGCATAAAGAGACAGGGGCACCATCAAAGGAGGGCAAAGAGAAGAAGGAGAAGCACAAGACCAAGACGGCCCAGCAGATTGCCAAGGACATGGAACGCTGGGCCCGCAGTCTCAACAAGCAAAAAGAAAACTTCAAAAACAGCTTCCAGCCCATCAGCTCTCTGCGAGATGATGAAAGGCGAGAGTCGGCCACCGCAGATGCTGGCTACGCCATCCTTGAGAAGAAGGGAGCGCTAGCCGAGAGGCAACACACCAGCATGGATCTCCCGAAACTGGCCAGCGATGACCGCCCAAGCCCACCTCGGGGGCTGGTGGCAGCCTACAGTGGGGAGAGTGACAGTGAGGAGGAGCAGGAGCGAGGCGGCCCTGAGCGGGAGGAGAAGCTCACCGACTGGCAGAAGCTGGCCTGTCTGCTATGTCGCCGCCAGTTCCCCAGCAAGGAAGCACTCATCCGGCACCAGCAGCTCTCGGGGCTCCACAAGCAAAACCTTGAGATTCACCGGCGAGCCCACTTGTCAGAAAACGAGCTAGAAGCATTAGAGAAAAACGACATGGAGCAAATGAAGTACCGGGACCGTGCAGCTGAACGCAGGGAGAAATATGGCATCCCTGAGCCACCAGAGCCCAAGAGGAGGAAGTACGGCAGCATATCCACAGCCTCCGTCGACTTTGAGCAGCCCACCCGGGATGGCCTGGGCAGTGACAACATTGGCAGTCGCATGCTCCAGGCCATGGGTTGGAAAGAAGGCAGTGGCCTGGGCCGCAAGAAGCAGGGCATTGTCACCCCCATTGAGGCCCAAACACGGGTGCGGGGGTCTGGCCTGGGTGCCAGGGGAAGCTCCTATGGGGTCACCTCGACTGAGTCCTACAAGGAGACACTGCACAAGACAATGGTGACCCGCTTCAATGAGGCCCAGTGA

Related Sequences

XP_004871626.1 Protein

Rbm10 PREDICTED: RNA-binding protein 10 isoform X3 [Heterocephalus glaber]

Length: 936 aa      View alignments
>XP_004871626.1
MEYERRGGRGDRTGRYGATDRSQDDGGETRSRDHDYRDMDYRSYPREYGSQEGKHDYDDSSEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEEEEEEDEEEEEKASNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGARMDSQALPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIEAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRINAASVASTAIAAAQWAISQTLPPTSQASQGGEGAWATPEEPPVDYSYYQQDESYGSSQGTDSLYGHGYLKGTKGPGITGTKGDPTGAGPEASLESGSDSVSIQAFSRAQPGAAPGLYQQSTAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSTLPPATSPTTQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGSISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ