Details from NCBI annotation

Gene Symbol Lyn
Gene Name v-yes-1 Yamaguchi sarcoma viral related oncogene homolog, transcript variant X2
Entrez Gene ID 101696753

Database interlinks

Part of NW_004624886.1 (Scaffold)

For more information consult the page for NW_004624886.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LYN ENSCPOG00000011693 (Guinea pig)

Gene Details

v-yes-1 Yamaguchi sarcoma viral related oncogene homolog

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010517, Guinea pig)

Protein Percentage 98.05%
CDS Percentage 92.38%
Ka/Ks Ratio 0.03057 (Ka = 0.01, Ks = 0.3282)

LYN ENSG00000254087 (Human)

Gene Details

v-yes-1 Yamaguchi sarcoma viral related oncogene homolog

External Links

Gene Match (Ensembl Protein ID: ENSP00000428924, Human)

Protein Percentage 97.07%
CDS Percentage 90.89%
Ka/Ks Ratio 0.03377 (Ka = 0.0137, Ks = 0.4059)

Lyn ENSMUSG00000042228 (Mouse)

Gene Details

Yamaguchi sarcoma viral (v-yes-1) oncogene homolog

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038838, Mouse)

Protein Percentage 97.46%
CDS Percentage 89.91%
Ka/Ks Ratio 0.02062 (Ka = 0.0113, Ks = 0.5488)

Lyn ENSRNOG00000008180 (Rat)

Gene Details

v-yes-1 Yamaguchi sarcoma viral related oncogene homolog (Lyn), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011130, Rat)

Protein Percentage 97.85%
CDS Percentage 89.45%
Ka/Ks Ratio 0.01793 (Ka = 0.0105, Ks = 0.5845)

Genome Location

Sequence Coding sequence

Length: 1539 bp    Location: 4118789..4030780   Strand: -
>XM_004871524.1
ATGGGATGTATAAAATCAAAAAGGAAAGACAATCTGAATGACGATGGAATAGATTTGAAGACTCAACCAGTACGTAATACTGACCGAACTATTTATGTGAGAGATCCAACGTCCAATAAACAGCAAAGGCCAATTCCAGAATCTCAGCTTTTACCAGGACAAAGGTTTCAAGCTAAAGATCCAGAGGAGCAAGGAGACATTGTGGTGGCCTTGTATCCATATGATGGCATCCACCCAGATGACTTGTCTTTCAAGAAGGGAGAGAAGATGAAAGTCCTGGAGGAGCATGGAGAATGGTGGAAAGCTAAGTCCCTTTCAACCAAGAGAGAAGGCTTCATCCCTAGCAACTACGTGGCCAAGGTCAACACCTTAGAAACAGAAGAGTGGTTTTTTAAGGATATAACCAGGAAAGATGCAGAACGACAACTCCTGGCACCAGGGAACAGTCCAGGAGCTTTTCTCATTAGAGAAAGTGAAACATTAAAAGGAAGCTTCTCTCTGTCTGTCAGAGATTATGATCCTGTGCATGGCGATGTTATTAAGCACTACAAAATTCGGAGTTTGGACAATGGGGGCTATTACATCTCTCCACGAATTACTTTTCCCTGTATCAGTGATATGATTAAGCATTACCAAAAGCAGGCAGATGGCTTATGCAGAAGATTGGAGAAGGCATGTATTAGTCCCAAACCGCAGAAGCCATGGGATAAAGATGCCTGGGAAATCCCCCGGGAGTCCATTAAGCTGGTGAAAAAGCTTGGCGCCGGACAGTTTGGGGAAGTCTGGATGGGTTACTACAACAACAGCACAAAGGTTGCTGTGAAGACCCTGAAGCCAGGCACCATGTCTGTGCAAGCTTTCCTTGAGGAAGCCAACCTCATGAAGACACTGCAGCATGACAAGCTAGTGAGACTTTATGCAGTGGTCACCAAGGAAGAGCCCATCTACATCATCACTGAATACATGGCCAAGGGCAGTTTGCTAGACTTCCTCAAGAGTGATGAAGGAGGCAAAGTGCTGCTCCCGAAGCTCATTGACTTTTCTGCTCAGATTGCAGAGGGCATGGCCTACATTGAGCGTAAGAACTACATTCACCGCGACCTGCGAGCAGCTAACGTCCTGGTCTCCGAGTCACTCATGTGCAAGATTGCAGATTTTGGCCTTGCTCGAGTAATCGAAGACAATGAGTACACGGCAAGGGAAGGTGCTAAGTTCCCTATTAAGTGGACAGCTCCAGAAGCAATCAATTTTGGATGTTTCACTATCAAGTCTGATGTGTGGTCCTTTGGAATTCTCCTGTATGAAATTGTCACCTATGGAAAGATTCCCTACCCAGGGAGAACCAATGCAGATGTAATGACTGCACTGTCCCAGGGCTACCGGATGCCTCGCATGGAGAACTGCCCAGATGAGCTCTATGACATCATGAAAATGTGCTGGAAAGAAAAAGCAGAGGAGAGGCCAACATTTGATTATCTGCAGAGCGTCCTGGATGACTTCTACACTGCCACTGAGGGGCAGTATCAGCAACAGCCATAG

Related Sequences

XP_004871581.1 Protein

Lyn PREDICTED: tyrosine-protein kinase Lyn isoform X2 [Heterocephalus glaber]

Length: 512 aa      View alignments
>XP_004871581.1
MGCIKSKRKDNLNDDGIDLKTQPVRNTDRTIYVRDPTSNKQQRPIPESQLLPGQRFQAKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLSTKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSPGAFLIRESETLKGSFSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQADGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP