Details from NCBI annotation

Gene Symbol Sdr16c5
Gene Name short chain dehydrogenase/reductase family 16C, member 5, transcript variant X4
Entrez Gene ID 101723971

Database interlinks

Part of NW_004624886.1 (Scaffold)

For more information consult the page for NW_004624886.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SDR16C5 ENSCPOG00000000571 (Guinea pig)

Gene Details

short chain dehydrogenase/reductase family 16C, member 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000502, Guinea pig)

Protein Percentage 82.85%
CDS Percentage 87.27%
Ka/Ks Ratio 0.32737 (Ka = 0.0978, Ks = 0.2988)

SDR16C5 ENSG00000170786 (Human)

Gene Details

short chain dehydrogenase/reductase family 16C, member 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000307607, Human)

Protein Percentage 81.55%
CDS Percentage 85.33%
Ka/Ks Ratio 0.26734 (Ka = 0.105, Ks = 0.3926)

Sdr16c5 ENSMUSG00000028236 (Mouse)

Gene Details

short chain dehydrogenase/reductase family 16C, member 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046298, Mouse)

Protein Percentage 81.55%
CDS Percentage 82.2%
Ka/Ks Ratio 0.17333 (Ka = 0.1094, Ks = 0.6313)

Sdr16c5 ENSRNOG00000008871 (Rat)

Gene Details

short chain dehydrogenase/reductase family 16C, member 5 (Sdr16c5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011813, Rat)

Protein Percentage 82.85%
CDS Percentage 84.03%
Ka/Ks Ratio 0.17184 (Ka = 0.0934, Ks = 0.5433)

Genome Location

Sequence Coding sequence

Length: 930 bp    Location: 3746194..3762250   Strand: +
>XM_004871516.1
ATGGCTTCCTACCTGAAAACAACAAAGGAATTGCTTGTTTTCTTAGGAAAATCACTTTTTAGTGTTCTGAAGGCTCTGATTTTTACCTTCATTCCAAAGCCACGAAAGAATGTGGCTGGTGAAACTGTCCTCATAACAGGCTCTGGGAGTGGACTCGGGAGGCTCTTAGCCTTGCAATTCGCCCGTCTTGGATCTGTGCTTGTTCTCTGGGATGTCAATACAGAGGCAAATGAGGAGACATGCCGGATGGCTCAGGAAGCTGGTGCCATGAAGGTACGTGCCTACACCTGTGACTGCAGTCAAAAGGAAGAAGTCTATAAAGTGGCTGATCAGGTTAAAAAAGAAGTTGGAGATGTTTCCATCTTAATTAACAATGCTGGAATTGTAACAGGCAAGAAGTTCCTTGACTGCCCAGATGAGCTTATGGAAAAGTCATTTAATGTGAATTTTAAAGCACATTTATGGACTTATAAAGCCTTTCTACCTACTATGATTGCTAATAACCATGGACATTTGGTTTGCATTTCAAGTTCAGCTGGATTAGTTGGAGTAAATGGGCTGGCAGATTATTGTGCAAGTAAATTTGCAGCCGTTGGATTTGCTGAATCTATGTTTGTAGAAACATTTGCCCAAAAACAAAAAGGGATCAAAACTACAATTGTGTGTCCGTTTTTTATAAAAACAGGAATGTTTGAGGGTTGTACTACTAGTTCCCCTACTCTGTTGCCAATTCTGGAACCAGAATATGTAGTCAGGAAAATAATAGATGCTATTCTGCAGGAACAGCTGTACCTGTATATGCCAAAGTTTTTATATCTTGTGATGTTTTTAAAAAGTGTCCTGCCCGTCAAGACAGGACTGCTTATAGCTGACTATGTAGGCGCCTTTAATGTAATGGATGGCTTCACTGGGCAAAAGAAGAAAACCTAA

Related Sequences

XP_004871573.1 Protein

Sdr16c5 PREDICTED: epidermal retinol dehydrogenase 2 isoform X4 [Heterocephalus glaber]

Length: 309 aa      View alignments
>XP_004871573.1
MASYLKTTKELLVFLGKSLFSVLKALIFTFIPKPRKNVAGETVLITGSGSGLGRLLALQFARLGSVLVLWDVNTEANEETCRMAQEAGAMKVRAYTCDCSQKEEVYKVADQVKKEVGDVSILINNAGIVTGKKFLDCPDELMEKSFNVNFKAHLWTYKAFLPTMIANNHGHLVCISSSAGLVGVNGLADYCASKFAAVGFAESMFVETFAQKQKGIKTTIVCPFFIKTGMFEGCTTSSPTLLPILEPEYVVRKIIDAILQEQLYLYMPKFLYLVMFLKSVLPVKTGLLIADYVGAFNVMDGFTGQKKKT