Sequence details NCBI ID: XM_004871463.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Muc1
Gene Name mucin 1, cell surface associated
Entrez Gene ID 101702421

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MUC1 ENSG00000185499 (Human)

Gene Details

mucin 1, cell surface associated

External Links

  • EntrezGene ID: 4582

Gene Match (Ensembl Protein ID: ENSP00000357380, Human)

Protein Percentage 57.05%
CDS Percentage 69.02%
Ka/Ks Ratio 0.55857 (Ka = 0.3722, Ks = 0.6664)

Muc1 ENSMUSG00000042784 (Mouse)

Gene Details

mucin 1, transmembrane

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041963, Mouse)

Protein Percentage 56.54%
CDS Percentage 67.44%
Ka/Ks Ratio 0.45476 (Ka = 0.3884, Ks = 0.854)

Muc1 ENSRNOG00000020539 (Rat)

Gene Details

mucin 1, cell surface associated (Muc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027850, Rat)

Protein Percentage 52.96%
CDS Percentage 65.65%
Ka/Ks Ratio 0.57015 (Ka = 0.4671, Ks = 0.8192)

Genome Location

Sequence Coding sequence

Length: 1572 bp    Location: 2339297..2343451   Strand: +
Raw sequence   
>XM_004871463.1
ATGACACCGGGCACCCGGGCCCCTTCCTTCCTGCTGCTGCTGCTCCTGGTGCTTACAGGCCAGAAGAACGCCGTCACCTTATCTCAGAGCAGCTCCACCACCAAAAGCTCAGCTGACACTTCCACTACAGCCACCGGGATTGCTACATCAGGCTTGGCCACCTTTACACTCCACACCGGCTCCTTGGCCCCAGCCACCAGCTCTACATCTGCCTCAGGCATCCCTGCAGCCCACGATGGAACCTCAGCCCCAGCCACCAGCTCTGCCTCAGGGCCAGCCACCCCTGCAGCCCACGATGGGACCTCGGCCGCAGCCACCAGCTCTGCCTCAGGGCCAGCCACCCCCACCAGCTCTGCCTCAGGGCCAGCCACCCCTGCGGCCCACGATGGCTCCTCGGCCCCAGCCACCAGCTCTGCCTCAGGGTCAGCCACCCCTACAGCCCACGATGGGACCTCGGCCCCAGCCACCAGCTCTGCCTCAGCCACCCCTGCAGCCCATGATGGGACCTCGGCTGCAGCCACCAGCTCTGCCTCAGGGTCAGCCACCCCTGCAGTCCACGATGGGACCTCGGCCCCAGCCACCAGCTCTATGTCTGTCTCAGCCACCCCTACAGGCCACGAGGGGACCTCAGCACCAGCCACCACCAGCTCTGTGTCTGTCTCACCCACTCCTACAGCCCATGAGGGCACCTCAGCACCAGCCACCAGCTCTGTGTCAGTCCTGGCCACCACTCTAGCTCACAGTGGCTCCTCTGCTGTGGCCAGCACGACCCCAGTCAGCAAGGAGTCTCAGTCCTCATTTCCCAGCTATCAGTCTCCTACTTCCACCCCCTTTGGCACCCCCGGCAGCGGGATGACCACTGGTAGCACTGAGCACAGTACGGCACCTCCCTCTCCTCCCTCCAGTCATTCCCCTCAGCCGTCTGGTATGGTCTCTCTCTTCTTCCTGTTTTTTGAGATTTTGAACCTCCAGTTTAATTCTTCTCTGGAAGATCCCAGTACTCGCTACTATCAAGAGCTGGAGAAGAACATTTCTGGACTGTTTTTCCAGACTTATCAACAAGATTTTCTGGGCCTCTTGAGTATCAAGTTTAGGCCAGGGTCTGTGGCAGTGGAGTCAATGCTGATCTTCCGGAAGGGCACTGCCAGCGACTACAGTGTGTGGTCACGGCTCACGGAGAATAAAGCGGAAGCAGAAAGATACAACCTGGTCATCTCACAAGTCAAGGCGAGTGAGGTGCAGGCTCCTTCTCCCACTGCCCAGGCCAGGGTGCCAGGCTGGGGCATCGCCCTGCTGGTGCTGGTCTGCGTTCTGGTCCTGCTAGCCCTGGTCTATTACATCACCCTGGCTGTATTTCAGTGCCGCCGGAAGAGCTATGGGCACCTGGACATCTTTCCAACACGGGACACCTACCACCCCATGAGCGAATACCCCACCTACCACACGCACGGGCGCTATGTGCCCCCTGGCAGCACCAGGCGCAGCCCGTATGAGGAAGTTTCTGCAGGAAATGGTGGAGGCAGCCTCTCTTACACGAACCCAGCAGTGGCAGCCACTTCCGCCAACTTGTAG

Related Sequences

XP_004871520.1 Protein

Muc1 PREDICTED: mucin-1 [Heterocephalus glaber]

Length: 523 aa      
>XP_004871520.1
MTPGTRAPSFLLLLLLVLTGQKNAVTLSQSSSTTKSSADTSTTATGIATSGLATFTLHTGSLAPATSSTSASGIPAAHDGTSAPATSSASGPATPAAHDGTSAAATSSASGPATPTSSASGPATPAAHDGSSAPATSSASGSATPTAHDGTSAPATSSASATPAAHDGTSAAATSSASGSATPAVHDGTSAPATSSMSVSATPTGHEGTSAPATTSSVSVSPTPTAHEGTSAPATSSVSVLATTLAHSGSSAVASTTPVSKESQSSFPSYQSPTSTPFGTPGSGMTTGSTEHSTAPPSPPSSHSPQPSGMVSLFFLFFEILNLQFNSSLEDPSTRYYQELEKNISGLFFQTYQQDFLGLLSIKFRPGSVAVESMLIFRKGTASDYSVWSRLTENKAEAERYNLVISQVKASEVQAPSPTAQARVPGWGIALLVLVCVLVLLALVYYITLAVFQCRRKSYGHLDIFPTRDTYHPMSEYPTYHTHGRYVPPGSTRRSPYEEVSAGNGGGSLSYTNPAVAATSANL