Details from NCBI annotation

Gene Symbol Shc1
Gene Name SHC (Src homology 2 domain containing) transforming protein 1, transcript variant X2
Entrez Gene ID 101717434

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SHC1 ENSCPOG00000024934 (Guinea pig)

Gene Details

SHC (Src homology 2 domain containing) transforming protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018761, Guinea pig)

Protein Percentage 95.37%
CDS Percentage 92.8%
Ka/Ks Ratio 0.10631 (Ka = 0.0251, Ks = 0.2359)

SHC1 ENSG00000160691 (Human)

Gene Details

SHC (Src homology 2 domain containing) transforming protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000401303, Human)

Protein Percentage 96.05%
CDS Percentage 92.28%
Ka/Ks Ratio 0.06784 (Ka = 0.0201, Ks = 0.2966)

Shc1 ENSMUSG00000042626 (Mouse)

Gene Details

src homology 2 domain-containing transforming protein C1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091940, Mouse)

Protein Percentage 95.16%
CDS Percentage 88.77%
Ka/Ks Ratio 0.04702 (Ka = 0.0245, Ks = 0.5207)

Shc1 ENSRNOG00000020657 (Rat)

Gene Details

SHC (Src homology 2 domain containing) transforming protein 1 (Shc1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028038, Rat)

Protein Percentage 94.65%
CDS Percentage 88.77%
Ka/Ks Ratio 0.05452 (Ka = 0.0267, Ks = 0.4902)

Genome Location

Sequence Coding sequence

Length: 1752 bp    Location: 2511054..2520885   Strand: +
>XM_004871325.1
ATGGATCTCCTACCCCCCAAGCCCAAGTACAACCCGCTTCGGAATGAGTCTCTGTCATCGCTGGAGGAGGGGGCTTCGGGGTCCAGCCCACCGGAGGAGCTGCCCTCTCCGTCAGCCTCCTCCCTGGGGCCCATCCTGCCTCCTTTGCCCTCGGACGACAGCCCCACCACCCTGTGTTCCTTCTTCCCCCGGATGAGCAACTTGAAGCTGGCCAACCCAGCCGGGGGGCGCCTGGGGCCTAAGGGGGAGCCAGGCAGGGCAGCCGAGGATGGGGAGGGAATCACAGGGACAGCTGTGCTGGACTCAGGCCCCCTGCCCCTCCTCCAGGACATGAACAAGCTGAGTGGAGGCAGCGGGCGCAGGACTCGGGTGGAAGGGGGCCAGCTGGGGGGCGAGGAGTGGACCCGCCACGGGAGCTTTGTCAATAAGCCCACGAGGGGCTGGCTGCATCCCAACGACAAAGTCATGGGACCCGGGGTTTCCTACTTGGTTCGGTACATGGGCTGCGTGGAGGTTCTGCAGTCAATGCGTGCCCTTGACTTCAACACCCGGACTCAGGTCACCAGGGAAGCCATCAGTCTGGTGTGCGAGGCCGTGCCGGGTGCTAAGGGGGCGACCAGGAGGAGAAAGCCCTGTAGCCGCCCTCTCAGCTCTGTCCTGGGGAGGAGTAACCTGAAATTCGCCGGAATGCCAATCACTCTCACCGTGTCCACCAGCAGCCTCAACCTCATGGCCGCAGACTGCAAACAGATCATTGCCAACCACCACATGCAGTCGATCTCATTTGCGTCCGGCGGAGACCCGGACACAGCCGAGTATGTCGCCTATGTTGCCAAAGACCCTGTGAATCAGAGAGCCTGCCACATCCTGGAGTGTCCCGAAGGGCTCGCCCAGGACGTCATCAGCACCATTGGCCAGGCCTTCGAGCTGCGCTTTAAACAGTACCTCAGGAACCCGCCCAAGCTGGTCACCCCCCATGACAGGATGGCCGGCTTCGATGGCTCAGCTTGGGATGAGGAGGAGGAAGAGCCATCTGACCACCAGTACTATAATGACTTCCCGGGGAAGGAGCCCCCCCTTGGGGGGGTGGTGGACATGAGGCTTCGGGAAGGAGCCACACCGGGGGCTGCTCGGCCCACGCCACCCAGTGCCCAGACCCCCAGCCATCTGGGAGCCACACTGCCGGTAGGGCAGCCTATTGCAGGAGACCCAGAAGTCCGAAAGCAGATGCCACCTCCACCACCCTGCCCAGGCAGAGAGCTCTTTGACGATCCCTCCTACGTCAACGTCCAGAACCTAGACAAGGCCCGGCAAGCAGGGGGTGGGGCTGGACCCCCCAATCCTGCTGTCAATGGCAGTGCGCCCCGGGACCTCTTCGACATGAAGCCATTCGAAGATGCCCTTCGGGTGCCTCCACCTCCCCAGTTGATGTCCATGGCTGAGCAGCTCCGAGGGGAGCCCTGGTTCCATGGGAAGCAGAGCCGGCGAGAGGCTGAGGCACTGCTGCAGCTCAACGGGGACTTCCTGGTGCGAGAGAGCACGACCACGCCTGGCCAGTATGTGCTCACTGGCCTGCAGAGTGGGCAGCCGAAGCACTTGCTTCTGGTGGACCCTGAGGGTGTGGTTCGGACAAAGGATCACCGCTTTGAGAGTGTCAGTCACCTCATCAGCTACCACATGGACAATCACTTGCCCATCATCTCTGCGGGCAGCGAACTGTGTCTACAACAGCCCGTGGAGCGCAAGCTTTGA

Related Sequences

XP_004871382.1 Protein

Shc1 PREDICTED: SHC-transforming protein 1 isoform X2 [Heterocephalus glaber]

Length: 583 aa      View alignments
>XP_004871382.1
MDLLPPKPKYNPLRNESLSSLEEGASGSSPPEELPSPSASSLGPILPPLPSDDSPTTLCSFFPRMSNLKLANPAGGRLGPKGEPGRAAEDGEGITGTAVLDSGPLPLLQDMNKLSGGSGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSVLGRSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPSDHQYYNDFPGKEPPLGGVVDMRLREGATPGAARPTPPSAQTPSHLGATLPVGQPIAGDPEVRKQMPPPPPCPGRELFDDPSYVNVQNLDKARQAGGGAGPPNPAVNGSAPRDLFDMKPFEDALRVPPPPQLMSMAEQLRGEPWFHGKQSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVERKL