Sequence details NCBI ID: XM_004871248.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ntrk1
Gene Name neurotrophic tyrosine kinase, receptor, type 1, transcript variant X1
Entrez Gene ID 101724441

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NTRK1 ENSCPOG00000003195 (Guinea pig)

Gene Details

neurotrophic tyrosine kinase, receptor, type 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002894, Guinea pig)

Protein Percentage 90.6%
CDS Percentage 89.14%
Ka/Ks Ratio 0.10407 (Ka = 0.0497, Ks = 0.4773)

NTRK1 ENSG00000198400 (Human)

Gene Details

neurotrophic tyrosine kinase, receptor, type 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000431418, Human)

Protein Percentage 87.56%
CDS Percentage 86.73%
Ka/Ks Ratio 0.09596 (Ka = 0.0645, Ks = 0.6722)

Ntrk1 ENSMUSG00000028072 (Mouse)

Gene Details

neurotrophic tyrosine kinase, receptor, type 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029712, Mouse)

Protein Percentage 83.58%
CDS Percentage 82.5%
Ka/Ks Ratio 0.09634 (Ka = 0.0922, Ks = 0.9569)

Ntrk1 ENSRNOG00000013953 (Rat)

Gene Details

neurotrophic tyrosine kinase, receptor, type 1 (Ntrk1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018961, Rat)

Protein Percentage 83.21%
CDS Percentage 82.0%
Ka/Ks Ratio 0.08982 (Ka = 0.0942, Ks = 1.0482)

Genome Location

Sequence Coding sequence

Length: 2397 bp    Location: 1989138..2005474   Strand: +
Raw sequence   
>XM_004871248.1
ATGCTGCGAGGCGGACAGCGCGGGCGGCCCCGCTGGCACCGCCGAGCCACCGCGCTGGGCAGCCTGCTGGCTTGGCTGATGCTAGCATCGGTGGGCGCCACCTCCTGCCCGGATGTCTGCTGCCCCATTGGCCCCACCGGGCTCCGCTGCACCAGGGCTTCGCCCCTACAGAGCCTCCGCGACCTGCCGGTCACCGAGAACCTGACAGAACTTTATGTGGAGAACCAGCAACATCTGCAGCATCTGGAGCTCCGTGACCTGCAGGGCCTGGGCGAACTGAGAAACCTCACCATCGTGAAGAGTGGTCTCCGTTCCGTGGCGCCAGATGCCTTCTGTTCCACTCCTCAGCTCAGTCGCTTGAACCTGTCCTTCAATGCTCTGGAGTCTCTGTCCTGGAGAGCCACGCGGGGCCTGTCCTTACAGGAGCTGGTCCTGTCTGGGAATCCCCTGCGTTGCTCCTGCGCCCTGCACTGGCTGTGGCGCTGGGCGGAGGAGGGGCTGGGCGGAGTGCGCACACAGGGCCTGAGCTGCCTGGGGCCTGGGAACAAGAGCCTGCCACTAGGCCACAACACCAGCTGCGGTGTGCCCATGCTGCAGGTGCAGGTGTCCAATGCTTCTGTGGATGTGGGGGACAACGTGCTGCTGCGTTGCCATGTGCAGGGCCGGGACCTGCAGCAGGCCGGCTGGATCCTCTCAGAAGTGGAGGAGTCGGCCACGGTGATGAAATCTGGGGATCTGCCGTCCTTGGAGCTGACCTTGACCAATGTCACCCGTGACCTCAACAGGAAGAACGTGACCTGCTGGGCTGAGAATGACGTGGGCCGGGCTGAGGTCTCCGTCCAGGTCAACGTCTCCTTCGCCGCCAGCGTGAAGCTGGTGAAGGCGGTGGAGCAGCACCACTGGTGCATCCCCTTCTCCGTGGACGGCCAGCCGGCGCCCTCCCTGCGCTGGCTCTTCAACGGCTCCGTGCTCAACGAGACCGGCTTCATCTTCACCCAGTTCCTGGAGTCGGCGCCCAATGAGACGGCGCGCCACGGCTGCCTGCGCCTCAACCAGCCCACGCACGTCAACAACGGCAACTACACGCTGCTGGCCGCCAACCCCCTGGGCCAGGCCTCCGACTCCATCATGGCGGCCTTCATGGAGAACCCCTTCCAGTTCAACCCCGAGGACCCCATCCCCGTTTCCTTCCCGCCCGTGGACACTAACAGCACGTCTGGACACCCAGTGGAGAAGAGAGACGACACGCCTTTCGGGGTCTCCGTGGCCGTGGGGCTGGCTGTCTTTGCCTGCCTCTTCCTGTCCGCCCTGCTCCTCGTGCTTAACAAATGTGGACAGAGAAACAAGTTCGGGATCAACCGCCCTGCCGCGCTGGCTCCGGAGGACGGGCTGGCCATGTCCCTGCATTTCATGACCCTGGGGGGCAGTTCGCTTTCCCCTGCTGAGGGCAAAGGCTCTGGGCTGCAAGGCCACATCATCGAGAACCCACAGTACTTCAGCAACACCTGTGTCCACCACATCAAGCGCCGGGACATCGTGCTCAAGTGGGAGCTGGGCGAGGGTGCCTTCGGGAAGGTCTTCCTCGCCGAGTGCCACAGCCTGCTGCCTGAGCAGGACAAGATGCTGGTGGCCGTCAAGGCCCTGAAGGAGGTGTCCGAGAGTGCCCGGCAGGACTTCCATCGTGAGGCCGAGCTGCTCACCATGCTGCAGCACCAGCACATCGTGCGCTTCTTCGGGGTGTGCACCGAGGGCCGCCCGCTGCTGATGGTCTTTGAGTACATGCGGCATGGGGACCTCAATCGCTTCCTCCGGTCCCATGGGCCTGATGCCAAGCTGCTGGCTGGCGGGGAGGACGTGGCTCCGGGTCCCCTAGGCCTCGGCCAGCTGCTGGCGGTGGCCAGCCAGGTGGCGGCAGGCATGGTGTACCTGGCCAGCCTGCACTTCGTGCACCGTGACCTGGCCACACGCAACTGTCTGGTGGGCCAGGGTCTGGTGGTGAAGATCGGGGACTTTGGCATGAGCAGGGACATCTACAGCACCGACTACTACCGCGTGGGAGGTCGCACCATGCTGCCCATCCGCTGGATGCCGCCCGAGAGCATTCTCTACCGGAAGTTCACCACTGAGAGCGATGTGTGGAGCTTTGGCGTGGTGCTCTGGGAGATCTTCACCTACGGCCAGCAGCCCTGGTACCAGCTTTCCAATGCCGAGGCGATCGAGTGCATCACACAGGGCCGTGAGCTGGAGCGGCCGCGCACCTGCCCGCCAGAAGTCTACGCCATCATGCGGGGCTGCTGGCAGCGGGAGCCCCAGCAGCGCTGCAGCATCAAGGACGTGCACGCCCGGCTGCAGGCGCTGGCACAGGCACCTCCCGTCTACCTGGACGTGCTGGGTTAG

Related Sequences

XP_004871305.1 Protein

Ntrk1 PREDICTED: high affinity nerve growth factor receptor isoform X1 [Heterocephalus glaber]

Length: 798 aa      View alignments
>XP_004871305.1
MLRGGQRGRPRWHRRATALGSLLAWLMLASVGATSCPDVCCPIGPTGLRCTRASPLQSLRDLPVTENLTELYVENQQHLQHLELRDLQGLGELRNLTIVKSGLRSVAPDAFCSTPQLSRLNLSFNALESLSWRATRGLSLQELVLSGNPLRCSCALHWLWRWAEEGLGGVRTQGLSCLGPGNKSLPLGHNTSCGVPMLQVQVSNASVDVGDNVLLRCHVQGRDLQQAGWILSEVEESATVMKSGDLPSLELTLTNVTRDLNRKNVTCWAENDVGRAEVSVQVNVSFAASVKLVKAVEQHHWCIPFSVDGQPAPSLRWLFNGSVLNETGFIFTQFLESAPNETARHGCLRLNQPTHVNNGNYTLLAANPLGQASDSIMAAFMENPFQFNPEDPIPVSFPPVDTNSTSGHPVEKRDDTPFGVSVAVGLAVFACLFLSALLLVLNKCGQRNKFGINRPAALAPEDGLAMSLHFMTLGGSSLSPAEGKGSGLQGHIIENPQYFSNTCVHHIKRRDIVLKWELGEGAFGKVFLAECHSLLPEQDKMLVAVKALKEVSESARQDFHREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGQQPWYQLSNAEAIECITQGRELERPRTCPPEVYAIMRGCWQREPQQRCSIKDVHARLQALAQAPPVYLDVLG