Sequence details NCBI ID: XM_004871246.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Prcc
Gene Name papillary renal cell carcinoma (translocation-associated), transcript variant X2
Entrez Gene ID 101723477

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRCC ENSCPOG00000011880 (Guinea pig)

Gene Details

papillary renal cell carcinoma (translocation-associated)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010686, Guinea pig)

Protein Percentage 66.81%
CDS Percentage 69.68%
Ka/Ks Ratio 0.45311 (Ka = 0.3253, Ks = 0.718)

PRCC ENSG00000143294 (Human)

Gene Details

papillary renal cell carcinoma (translocation-associated)

External Links

Gene Match (Ensembl Protein ID: ENSP00000271526, Human)

Protein Percentage 93.28%
CDS Percentage 90.84%
Ka/Ks Ratio 0.12 (Ka = 0.0344, Ks = 0.2866)

Prcc ENSMUSG00000004895 (Mouse)

Gene Details

papillary renal cell carcinoma (translocation-associated)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005015, Mouse)

Protein Percentage 92.64%
CDS Percentage 89.37%
Ka/Ks Ratio 0.11102 (Ka = 0.0399, Ks = 0.3596)

Prcc ENSRNOG00000012933 (Rat)

Gene Details

papillary renal cell carcinoma (translocation-associated) (Prcc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017735, Rat)

Protein Percentage 92.43%
CDS Percentage 89.57%
Ka/Ks Ratio 0.11708 (Ka = 0.0402, Ks = 0.3433)

Genome Location

Sequence Coding sequence

Length: 1476 bp    Location: 1925725..1948260   Strand: +
Raw sequence   
>XM_004871246.1
ATGTCTCTGGTTGCCTACGCCAGCAGCGATGAGAGCGAGCCAGACGAGGGGGAGCCGGAGCCGGAGGAAGAAGAGGCGGCGGCCCTTGCGCCTGGGCCCACCTTGGGAGGCTTGTTCGCTTCCCTTCCTGCACCCAAGGGTCCGGCCTTGCTGCCCCCGCCCCCCCAGATGCTGGCCCCGGCCTTCCCCCCGCCCCTGATGCTGCCCCCGCCCGCCGGAGACCCCAGACTCCAGCCTCCTCCGCCCTTGCCCTTCGGCCTGGGAGGCTTCCCCCCGCCTCCAGGCGTGAGCCCGGCTGAAGCGGCGGGAGTCGGGGAGGGGATGGGTCTGGGGCTGCCAGCTCCCCGAGGCCCTGGCCTCAGCCTGCCCTCCCCTGTCGGCGGTGCCGGCCCCCCCCCGGGGCTTCCCAAGCCAAAGAAGAGGACAGAGCCGGTGAAGATCGCGGCGCCGGAGCTGCACAAGGAGGATTCAGATTCTGAGGAAGATGAACCCACAAAGAAGAAAATTGTCCTTCAGGGATCTGGCGAGGGGACTGGTTTGTCTGCCTTGCTTCCCCAACCTAAAAATCTGACTGTGAAAGAGACTAACAGGTTGCTCCTGCCCCATGCCTTCTCCCGGAAACCCTCAGATGGCTCCTCTGATGCCAAGCCCTCCAGACTGGCTTCTAAGACCAAGCCCTCCTCTCTTGCACCTGTCGTGGGCACCACAACCACCACTCCGTCACCCTCTGCCATCAAGGCTGCTGCCAAGAGCGCTGCCCTGCAGGTGACGAAGCAGATCACGCAGGAAGAGGATGACAGTGATGAGGAAGTGGCCCCTGAGAACTTTTTCTCCCTCCCTGAGAAGGCTGAGGCACCTGGAGTTGAGCCATACCTTTACCCTGTCCCCACTGTCCCTGAAGAGCTGCCTCCGGGCATGGAGCCTGAGCTGGCATTCCAGGACGATGCGGCCAACGCCCCGCTGGAGTTTAAGATGGCAGCAGGCTCCAGTGGGGCCCCTTGGATGGCTAAGCCTGGGGATGACTACAGCTACAATCAGTTCTCTGCATATGGCGATGCCAATGCTGCTGGTGCTTATTATCAGGATTATTACAGTGGTGGCTACTATCCTGCGCAGGACCCGGCTCTGGCCTCCTCCCAGGAAATCGCCCCAGATGCCTCCTTCATTGATGACGAAGCATTTAAGCGGCTACAAGGCAAGAGGAACCGAGGGCGGGAGGAAATCACCTTCGTGGAGATCAAAGGTGATGACCAGCTCAGTGGGGCCCAGCAGTGGATGACCAAGTCGCTGACAGAAGAGAAGACCATGAAGTCATTCAGCAAAAAGAAAGGCGAGCAGCCAACAGGCCAGCAGCGGCGGAAACACCAGATCACATATCTGATTCACCAGGCTAAAGAGCGGGAGCTGGAACTGAAGAACACCTGGTCAGAGAACAAACTCAGCCGCCGCCAGACCCAAGCCAAATATGGATTCTAG

Related Sequences

XP_004871303.1 Protein

Prcc PREDICTED: proline-rich protein PRCC isoform X2 [Heterocephalus glaber]

Length: 491 aa      View alignments
>XP_004871303.1
MSLVAYASSDESEPDEGEPEPEEEEAAALAPGPTLGGLFASLPAPKGPALLPPPPQMLAPAFPPPLMLPPPAGDPRLQPPPPLPFGLGGFPPPPGVSPAEAAGVGEGMGLGLPAPRGPGLSLPSPVGGAGPPPGLPKPKKRTEPVKIAAPELHKEDSDSEEDEPTKKKIVLQGSGEGTGLSALLPQPKNLTVKETNRLLLPHAFSRKPSDGSSDAKPSRLASKTKPSSLAPVVGTTTTTPSPSAIKAAAKSAALQVTKQITQEEDDSDEEVAPENFFSLPEKAEAPGVEPYLYPVPTVPEELPPGMEPELAFQDDAANAPLEFKMAAGSSGAPWMAKPGDDYSYNQFSAYGDANAAGAYYQDYYSGGYYPAQDPALASSQEIAPDASFIDDEAFKRLQGKRNRGREEITFVEIKGDDQLSGAQQWMTKSLTEEKTMKSFSKKKGEQPTGQQRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF