Details from NCBI annotation

Gene Symbol Bcan
Gene Name brevican, transcript variant X1
Entrez Gene ID 101719389

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BCAN ENSCPOG00000003060 (Guinea pig)

Gene Details

brevican

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002770, Guinea pig)

Protein Percentage 86.06%
CDS Percentage 86.22%
Ka/Ks Ratio 0.15228 (Ka = 0.0761, Ks = 0.5)

BCAN ENSG00000132692 (Human)

Gene Details

brevican

External Links

Gene Match (Ensembl Protein ID: ENSP00000331210, Human)

Protein Percentage 81.96%
CDS Percentage 83.46%
Ka/Ks Ratio 0.16022 (Ka = 0.0987, Ks = 0.6161)

Bcan ENSMUSG00000004892 (Mouse)

Gene Details

brevican

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088491, Mouse)

Protein Percentage 77.92%
CDS Percentage 78.87%
Ka/Ks Ratio 0.15027 (Ka = 0.1334, Ks = 0.8878)

Bcan ENSRNOG00000018798 (Rat)

Gene Details

brevican (Bcan), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025496, Rat)

Protein Percentage 77.8%
CDS Percentage 78.57%
Ka/Ks Ratio 0.14721 (Ka = 0.1343, Ks = 0.9121)

Genome Location

Sequence Coding sequence

Length: 2685 bp    Location: 1816900..1829987   Strand: +
>XM_004871231.1
ATGGCCCCGCTGCTCCCGGCTCTCATGGTCGCCCTGGCCCTGACCCGGGTCCTGGAAGCTGACGTCCTGGATGGGGACAGCTCGGAGGACCGCGCGTTCCGCGTGCGCATCCCCGGGGCCCGCGCCGCGCCGCTGCAGGGCGTGCTGGGCGGCTCCCTCACCATCCCGTGCCAGGTGCACACGCTGCGGCCGCGGGGCCGGGCGGCGCCGGGCTCGCCGCGGGTCAAGTGGAGTTTTCTGGCCGGCGGCCGCGAGGCGGAGGTGCTGGTGGCGCGGGGGCTGCGCGTCAAGGTGAGCGAGGCCTACCGGTTCCGCGTGGCGCTGCCCGCCTACCCCGCGTCGTTCACCGACGTCTCCCTGCTGCTGAGCGAGCTGAGGCCCAACGACTCGGGCGTCTACCGCTGCGAGGTCCAGCACGGCATCGACGACGGCAGCGACGCGGTGGAGGTCAAGGTCAAGGGCGTTGTCTTCCTCTACCGCGAGGGCTCTGCCCGCTACGCTTTCTCCTTCGCCGGGGCCCGGGAAGCCTGCGCTCGCATAGGTGCCCGCATCGCCACGCCCGAGCAGCTCTACGCCGCCTACCTCGGGGGCTACGAGCAGTGCGACGCCGGCTGGCTGTCCGACCAGACTGTGAGGTATCCCATCCAGACCCCGAGAGAGGCCTGTTACGGAGACATGGACGGCTTCCCCGGGGTCCGGAACTACGGCGTGGTGGACCCAGGCGACCTCTACGACGTGTACTGCTACGCCGAGGACCTCCATGGGGAGCTGTTCCTAGGCGCCCCTCCAGACAAGCTGACGTGGGAGGAGGCCCGGGCATACTGCCGGGAGCGCGGCGCAGAGATCGCCACCACGGGCCAGCTGTACGCGGCCTGGGATGGGGGCCTGGACCGCTGCAGCCCTGGTTGGCTGGCCGACGGCAGCGTGCGCTACCCCATCGTCACCCCCAGCCAGCGCTGCGGCGGGGGCCTGCCTGGCGTCAAGACGCTCTTCCTCTTCCCCAACCAGACCGGCTTCCCCAACAAGCACAGCCGCTTCCACGTCTACTGCTTCCGAGACTCTGCCCACCCCTCTGCCATCCCTGGGGCCTCCAACCCAGCCTCTGATGGGCTAGAAGCCATCATCACAGTGACAGAGACCCTGGAGGAGCTGCAGCTGCCTCCAGAAGCGATGGAGAGTGAGTCTCGGGGAGCCATCTACTCCATCCCCGTCATGGAAGACGGGGCAGGTGGAAGCTCCACTCCTGAGGATCCAGCAGAGGCCCCCAGGACCCTCCTAGAATTCGAAATCGCATCTATTGTACCACCCACGGGGTCCTCAGAGGACGAAGGCGAGGCATTGGAGGAAGAAGAAGGGTACGAGGATGAAGAGGAGGCAGAGGAGGAGGCAGAGCAGGAGGAGGACGTGTGGGCGTGGCCTGGCGAACTCAGCAGCCCTGTCCCCTCAGAAGCATCAGTGGACTTGCTGTCCCAGGCACCCTGGGTCCTGCAGCCCGGCACACTGCCACCTCCCGAGGGACAGCCAGGAGCTCCCCGACCTCCGGGGGTCCGCCGACCACCTACTGAGGCTCTGCCCACTCCCGCGGAGGGGAGCCCAGCACCCTCACCGCCTTCCACTCCAGTTGGGGGGAGAGCGGTGGGGGAGGAGACTGGGGGTCCCGAGCTCTCTGGGGTCCCCCAGGGAGACAGCGAGGAGGCAGGGAGCTCCGAGGATGCGCCCTCCCTGCCTTCTGCCGCGCCGGGCCTTGGTGCTGGGGAGCTGGAGGCCCCCTCAGAGGAGAACTCCGGAAGAGCTGTCCCTGCGGGGACCTCAGCGCGGGCCCCCGTGCTGCCCACTGACGGCGCCGGCCAAGGCAGTGTGCCCGTGGCCCCCTCCTCAGGCGACTGCGTCCCCAGCCCCTGCCACAATGGTGGGACGTGCATGGAGGAGGGAGAGGGACTCCGCTGCCTGTGCTTGCCCGGCTATGGGGGGCACCTGTGCGACGTTGGCCTCCGCTCCTGCAGCCCGGGCTGGGACGCCTTCCAGGGCGCCTGCTACCGGCACTTCGCTGTGCGCCGCAGCTGGGAGGACGCAGAAAGCCAGTGCCGGCGGCTGGGCGCGCACTTGGCCAGCGTGCGCACGCCCGAGGAGCAGGCCTTCCTCAGCGGTCGCTACCGCGAGTACCAGTGGATCGGGCTCAACGACAGGACCCTGGAAGGCGACTTCCTGTGGTCAGATGGCGTCCCTGTGCTCTATGAGAATTGGAACCCTGGGCAGCCCGACAGCTACTTCCTGTCTGGAGAGAACTGCGTGGTCATGGTGTGGCACAACCAGGGACAGTGGAGTGACGTGCCCTGCAACTACCACCTGTCCTACACCTGCAAGATGGGGCTGGTGTCCTGTGGGCCCCCGCCAGAGCTGCCGTTGGCTCAAGTGTTTGGCAGCCCACGGCCGCGCTACGAGGTGGACACCGTGCTTCGCTACCGGTGCCTCGAGGGCCTGGTCCAGCGCAACCTGCCCCTGATCCGCTGCCAGGAGGATGGCAGCTGGGAGTCCCCTCGGATTGCCTGTGTGCCCCGAAGGCCCGCCCGTGATCCACACCCAGCGAAGGGCCCAGGACGCCTGGGAAGGCTATGGGGCCGCCGGAAGGTGCTGCTGACCCCTCCTTCTAGCCCTGCTCCTGGCCCCGAGGGAGCAAGGCCTTGA

Related Sequences

XP_004871288.1 Protein

Bcan PREDICTED: brevican core protein isoform X1 [Heterocephalus glaber]

Length: 894 aa      View alignments
>XP_004871288.1
MAPLLPALMVALALTRVLEADVLDGDSSEDRAFRVRIPGARAAPLQGVLGGSLTIPCQVHTLRPRGRAAPGSPRVKWSFLAGGREAEVLVARGLRVKVSEAYRFRVALPAYPASFTDVSLLLSELRPNDSGVYRCEVQHGIDDGSDAVEVKVKGVVFLYREGSARYAFSFAGAREACARIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVVDPGDLYDVYCYAEDLHGELFLGAPPDKLTWEEARAYCRERGAEIATTGQLYAAWDGGLDRCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFHVYCFRDSAHPSAIPGASNPASDGLEAIITVTETLEELQLPPEAMESESRGAIYSIPVMEDGAGGSSTPEDPAEAPRTLLEFEIASIVPPTGSSEDEGEALEEEEGYEDEEEAEEEAEQEEDVWAWPGELSSPVPSEASVDLLSQAPWVLQPGTLPPPEGQPGAPRPPGVRRPPTEALPTPAEGSPAPSPPSTPVGGRAVGEETGGPELSGVPQGDSEEAGSSEDAPSLPSAAPGLGAGELEAPSEENSGRAVPAGTSARAPVLPTDGAGQGSVPVAPSSGDCVPSPCHNGGTCMEEGEGLRCLCLPGYGGHLCDVGLRSCSPGWDAFQGACYRHFAVRRSWEDAESQCRRLGAHLASVRTPEEQAFLSGRYREYQWIGLNDRTLEGDFLWSDGVPVLYENWNPGQPDSYFLSGENCVVMVWHNQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGSPRPRYEVDTVLRYRCLEGLVQRNLPLIRCQEDGSWESPRIACVPRRPARDPHPAKGPGRLGRLWGRRKVLLTPPSSPAPGPEGARP