Sequence details NCBI ID: XM_004871182.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lmna
Gene Name lamin A/C, transcript variant X4
Entrez Gene ID 101704567

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LMNA ENSCPOG00000023214 (Guinea pig)

Gene Details

lamin A/C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015745, Guinea pig)

Protein Percentage 95.9%
CDS Percentage 90.62%
Ka/Ks Ratio 0.04333 (Ka = 0.028, Ks = 0.6462)

LMNA ENSG00000160789 (Human)

Gene Details

lamin A/C

External Links

Gene Match (Ensembl Protein ID: ENSP00000357283, Human)

Protein Percentage 96.09%
CDS Percentage 90.87%
Ka/Ks Ratio 0.0264 (Ka = 0.0194, Ks = 0.7367)

Lmna ENSMUSG00000028063 (Mouse)

Gene Details

lamin A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029699, Mouse)

Protein Percentage 94.78%
CDS Percentage 87.61%
Ka/Ks Ratio 0.02257 (Ka = 0.026, Ks = 1.1524)

Lmna ENSRNOG00000019638 (Rat)

Gene Details

lamin A/C (Lmna), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026705, Rat)

Protein Percentage 94.13%
CDS Percentage 87.75%
Ka/Ks Ratio 0.02794 (Ka = 0.0289, Ks = 1.0337)

Genome Location

Sequence Coding sequence

Length: 1386 bp    Location: 1455593..1464507   Strand: +
Raw sequence   
>XM_004871182.1
ATGGGGAACGCCGAGGGCCGCAACACCAAAAAGGAGGGTGACCTGATGGCCGCCCAGGCCCGGCTCAAGGACCTGGAAGCGCTGCTCAACTCCAAGGAGGCTGCGCTGAGCACAGCCCTCAGTGAGAAGCGCACGCTGGAGGGCGAGCTGCACGACCTGAGGGGGCAGGTGGCCAAGCTTGAGGCGGCCCTGGGCGAGGCCAAGAAGCAACTTCAGGATGAGATGCTGCGGCGGGTGGATGCTGAGAACAGGCTGCAGACCCTGAAGGAAGAGCTGGATTTCCAGAAGAACATCTACAGCGAGGAGCTGCGTGAGACCAAGCGCCGCCACGAGACCCGGCTGGTGGAGATTGATAATGGGAAGCAGCGCGAATTTGAGAGTCGCCTGGCCGATGCCCTGCAGGAGCTTCGGGCCCAGCACGAGGACCAGGTGGAGCAGTACAAGAAGGAGCTGGAGAAGACCTACTCTGCCAAGCTGGACAACGCCAGGCAGTCTGCCGAGAGGAACAGCAACCTGGTGGGGGCCGCCCACGAGGAGCTGCAGCAGTCCCGGATCCGCATCGACAGCCTGTCGGCCCAGCTGAGCCAGCTGCAGAAGCAGCTGGCAGCCAAGGAGGCGAAGCTTCGGGACCTGGAGGACTCGCTGGCCCGGGAACGGGACACCAGCCGCCGGCTGCTGGCCGACAAGGAGCGGGAGATGGCGGAGATGCGCGCCAGGATGCAGCAGCAGCTTGACGAGTACCAGGAGCTGCTGGACATCAAGCTGGCGCTGGACATGGAGATCCACGCCTACCGCAAGCTCCTGGAGGGCGAGGAGGAGAGGCTCCGCCTGTCCCCCAGCCCCACCTCGCAGCGCAGCCGCGGCCGCACCTCCTCCCACTCATCCCAGACGCATGGCGCCGGGGGCAGCATCACCAAAAAGCGCAAGCTGGAGTCCACAGAGAGCCGCAGCAGCTTCTCGCAGCACGCGCGCACTAGCGGGCGCGTGGCCGTGGAGGAGGTGGACGAGGGGGGCAAGTTTGTGCGGCTGCACAACAAGTCCAACGAGGACCAGTCCATGGGCAACTGGCAGATCAAGCGCCAGAATGGAGATGACCCCTTGCTGACCTACCGCTTCCCACCAAAATTCACCCTGAAGGCTGGGCAGGTTGTGACGATCTGGGCCTCAGGAGCCGGGGCCACCCACAGCCCCCCTACCGACCTGGTGTGGAAGGCACAGAGCACCTGGGGCTGTGGCAACAGCCTGCGCACTGCTCTCATCAACTCCACCGGCGAGGAGGTGGCCATGCGCAAGCTGGTGCGCTCCGTGACCGTGGTGGAGGACGACGAGGATGAGGATGGAGAGGACCTGCTCCATCACCACCACGTGAGTGGCAGCCGCCGCTGA

Related Sequences

XP_004871239.1 Protein

Lmna PREDICTED: prelamin-A/C isoform X4 [Heterocephalus glaber]

Length: 461 aa      View alignments
>XP_004871239.1
MGNAEGRNTKKEGDLMAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRTSSHSSQTHGAGGSITKKRKLESTESRSSFSQHARTSGRVAVEEVDEGGKFVRLHNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWASGAGATHSPPTDLVWKAQSTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGEDLLHHHHVSGSRR