Sequence details NCBI ID: XM_004871133.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fdps
Gene Name farnesyl diphosphate synthase, transcript variant X1
Entrez Gene ID 101721614

Database interlinks

Part of NW_004624885.1 (Scaffold)

For more information consult the page for NW_004624885.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FDPS ENSG00000160752 (Human)

Gene Details

farnesyl diphosphate synthase

External Links

Gene Match (Ensembl Protein ID: ENSP00000349078, Human)

Protein Percentage 84.06%
CDS Percentage 85.67%
Ka/Ks Ratio 0.18682 (Ka = 0.0909, Ks = 0.4868)

Fdps ENSMUSG00000059743 (Mouse)

Gene Details

farnesyl diphosphate synthetase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080531, Mouse)

Protein Percentage 81.02%
CDS Percentage 83.1%
Ka/Ks Ratio 0.14232 (Ka = 0.1034, Ks = 0.7268)

Genome Location

Sequence Coding sequence

Length: 1245 bp    Location: 943614..949529   Strand: +
Raw sequence   
>XM_004871133.1
ATGCCCCTGTCCCGTTTGCTGAGATCTGTGGGGGTCTTCCTGCTGCCCGCCCCCTGCTGGGGACCCAGGGAGAGGTGGCTGGGTTCCCCGCGGAGGCCCTCCCTCCTGGGGGCCTGGCACGGTGCCCGCTGCTGGTGCCAAGTGTGGACAGAGCAGCCTCGAGCACTTTGCTCCTCTCTCAGGATGAGTGGAGACCAGAAGTCGGATGTTTATGCTCAAGAAAAGCAGAATTTCATCCAGCACTTCTCTCAGATTGTCAGGGTGCTGACTGAAGAAGACACAGAGCACCCAGAGATTGGAGATGTCCTAGCCCGGCTCAAGGAGGTCCTAGAGTACAATGCCATTGGAGGCAAGTACATCCGGGGCTTGACGGTGCTGGTAGCATTCAAGGAGCTGGTGGAGCCAAGCAAACAGGATGCTGAGAGCATGCAGCGAGTGCTGACCGTGGGCTGGTGTGTGGAGCTGCTGCAAGCTTTCTTCCTGGTGGCAGATGACATCATGGACTCATCCCTGACCCGCCGGGGACGGGCCTGCTGGTATCAGAAGCCAGGCATAGGTTTGGATGCCATCAACGATGCTTTCCTTCTGGAATCCTGTATCTACCGCCTGCTGAGGCTGCACTGCCGGGAGCAGCCCTACTACCTGAACCTGCTCGAGCTTTTCCTGCAGACTTCCTACCAGACGGAGGTCGGGCAGACTCTGGACCTCATCACAGCCCCCCAGGGCCAGGTGGACCTCAGCAGATACACTGAGAAGAGGTACAAATCTATTGTCAAGTACAAGACAGCTTTCTACTCCTTCTACCTGCCTGTCGCTGCTGCCATGTACATGGCTGGCATAGACGGGGAGAAGGAGCACAGCAGCGCCAGGGGGATCCTGACGGAGATGGGCGAGTTCTTCCAGATCCAGGATGATTTCCTTGACCTCTTTGGGGACCCCAGTGTGACAGGGAAGATTGGCACCGACATCCAGGACAACAAATGCAGCTGGCTGGTGGTTCAGTGCCTGCAGCGGGCGACTCTGGAGCAGCGCCAGATCCTGCAGGAGAATTATGGGCAGAAGGACGCCGAGAAGGTGGCCAGGGTGAAGGCGCTGTACGAGGAGCTGGACCTGCCGGCTGCGTTCCTGCGGTACGAGGAGGACAGCTACAGCCGCCTCCAGGGCCTCGTCCAGCAGCACGCCGCGTCGCTGCCCGCGGCCATCTTCCTGGGGCTAGCGAACAAGATCTACAAGCGGAAAAAGTGA

Related Sequences

XP_004871190.1 Protein

Fdps PREDICTED: farnesyl pyrophosphate synthase isoform X1 [Heterocephalus glaber]

Length: 414 aa      
>XP_004871190.1
MPLSRLLRSVGVFLLPAPCWGPRERWLGSPRRPSLLGAWHGARCWCQVWTEQPRALCSSLRMSGDQKSDVYAQEKQNFIQHFSQIVRVLTEEDTEHPEIGDVLARLKEVLEYNAIGGKYIRGLTVLVAFKELVEPSKQDAESMQRVLTVGWCVELLQAFFLVADDIMDSSLTRRGRACWYQKPGIGLDAINDAFLLESCIYRLLRLHCREQPYYLNLLELFLQTSYQTEVGQTLDLITAPQGQVDLSRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHSSARGILTEMGEFFQIQDDFLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATLEQRQILQENYGQKDAEKVARVKALYEELDLPAAFLRYEEDSYSRLQGLVQQHAASLPAAIFLGLANKIYKRKK