Details from NCBI annotation

Gene Symbol Fmr1
Gene Name fragile X mental retardation 1, transcript variant X3
Entrez Gene ID 101707722

Database interlinks

Part of NW_004624883.1 (Scaffold)

For more information consult the page for NW_004624883.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FMR1 ENSCPOG00000003723 (Guinea pig)

Gene Details

fragile X mental retardation 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003362, Guinea pig)

Protein Percentage 94.2%
CDS Percentage 93.29%
Ka/Ks Ratio 0.22983 (Ka = 0.0411, Ks = 0.1789)

FMR1 ENSG00000102081 (Human)

Gene Details

fragile X mental retardation 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000359506, Human)

Protein Percentage 97.22%
CDS Percentage 95.04%
Ka/Ks Ratio 0.0602 (Ka = 0.0122, Ks = 0.2027)

Fmr1 ENSMUSG00000000838 (Mouse)

Gene Details

fragile X mental retardation syndrome 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000085906, Mouse)

Protein Percentage 97.3%
CDS Percentage 93.82%
Ka/Ks Ratio 0.04656 (Ka = 0.0121, Ks = 0.2596)

FMR1 ENSRNOG00000011900 (Rat)

Gene Details

Fragile X mental retardation protein 1 homolog

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016227, Rat)

Protein Percentage 96.96%
CDS Percentage 93.82%
Ka/Ks Ratio 0.05236 (Ka = 0.0135, Ks = 0.2579)

Genome Location

Sequence Coding sequence

Length: 1836 bp    Location: 645705..680546   Strand: +
>XM_004871038.1
ATGGAGGAGCTGGTGGTGGAAGTGCGGGGCTCCAATGGCGCTTTCTACAAGGCATTTGTAAAGGATGTTCATGAAGATTCAATAACAGTTGCATTTGAAAACAACTGGCAGCCAGAGAGGCAGATTCCATTCCATGATGTGAGATTCCCACCACCTGTAGGTTACAGTAAAGATATAAATGAAAGTGATGAAGTTGAGGTTTATTCCAGAGCAAATGAAAAAGAGCCTTGCTGTTGGTGGTTAGCTAAAGTGAGGATGATAAAGGGTGAGTTTTACGTGATAGAATATGCAGCATGTGATGCTACATATAATGAAATTGTCACAATTGAGCGTCTACGATCGGTTAATCCCAACAAACCTGCTACGAAAGATACTTTCCATAAGATCAAACTGGAGGTGCCAGAAGACTTACGACAGATGTGTGCCAAAGAATCGGCACATAAGGACTTTAAAAAGGCAGTTGGTGCCTTTTCTGTAACTTATGACCCAGAAACTTACCAGCTTGTCATTTTGTCCATCAATGAAGTCACCTCAAAGCGAGCACATATGTTGATTGACATGCACTTTCGGAGTCTGCGCACTAAGCTGTCTCTGATACTGAGAAATGAAGAAGCCAGTAAACAGCTGGAGAGTTCACGGCAGCTTGCCTCCAGGTTTCATGAACAGTTTATTGTACGAGAAGATCTGATGGGTCTAGCTATTGGTACTCATGGTGCTAATATTCAGCAAGCTAGAAAAGTACCTGGGGTGACTGCTATTGATCTAGATGAAGATACCTGCACATTTCATATCTACGGAGAGGATCAGGATGCAGTTAAAAAGGCAAGAAGTTTCCTTGAGTTTGCTGAGGATGTCATACAAGTTCCAAGGAACTTAGTAGGCAAGGTAATAGGAAAAAATGGAAAACTGATTCAGGAAATTGTGGACAAGTCAGGAGTTGTGAGGGTGAGGATTGAGGCCGAAAATGAGAAAAATGTCCCTCAGGAAGAGGAGATTATGCCACCAAATTCCCTACCTTCTAACAGTTCAAGGGTTGGATCTAATACCTCTGAAGAAAAAAAACATTTAGATATAAAGGAAAACAGCGCCAATTTTTCTCAACCTAACAGTACAAAAGTCCAGAGGGGTATGGTACCATTTGTTTTTGTGGGAACAAAGGACAGCATCGCTAATGCCACTGTTCTATTGGACTATCACCTTAACTACTTAAAGGAAGTAGACCAGTTGCGTTTGGAGAGATTACAAATTGATGAGCAGTTGCGACAGATTGGAGCTAGTTCTAGACCACCACCAAATCGTACAGATAAGGAAAAAGGCTATGTGACTGAGGATGGTCAAGGAATGGGTCGAGGTAGTAGACCATACAGAAATAGGGGGCACGGCAGACGCGGTCCTGGATATACTTCAGGAACTAATTCTGAAGCATCAAATGCTTCTGAAACAGAATCTGACCACAGAGACGAACTCAGTGATTGGTCATTAGCTCCAACAGAGGAAGAGAGAGAGAGCTTCCTACGCAGAGGAGACGGGCGGCGGCGTGGCGGGGGAGGAAGAGGACAGGGAGGAAGAGGACGAGGAGGAGGCTTCAAAGGAAATGACGATCACTCCCGAACAGATAATCGTCCACGTAATCCAAGAGAGGCTAAAGGAAGAACAGCTGATGGATCTTTTCAGATCAGAGTTGACTGCAATAATGAAAGGAGTGTCCACACTAAAACGTTACAGAATACCTCCAGCGAAGGTAATCGGCTGCGCACGGGAAAAGATCGTAACCAGAAGAAGGAGAAGCCAGACAGCGTGGATGGTCAGCAACCACTCGTGAACGGAGTACCCTAA

Related Sequences

XP_004871095.1 Protein

Fmr1 PREDICTED: fragile X mental retardation protein 1 isoform X3 [Heterocephalus glaber]

Length: 611 aa      View alignments
>XP_004871095.1
MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYSKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPETYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSNSSRVGSNTSEEKKHLDIKENSANFSQPNSTKVQRGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTEDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTADGSFQIRVDCNNERSVHTKTLQNTSSEGNRLRTGKDRNQKKEKPDSVDGQQPLVNGVP