Sequence details NCBI ID: XM_004870912.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sorl1
Gene Name sortilin-related receptor, L(DLR class) A repeats containing
Entrez Gene ID 101713123

Database interlinks

Part of NW_004624880.1 (Scaffold)

For more information consult the page for NW_004624880.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SORL1 ENSCPOG00000015350 (Guinea pig)

Gene Details

sortilin-related receptor, L(DLR class) A repeats containing

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013835, Guinea pig)

Protein Percentage 96.47%
CDS Percentage 93.03%
Ka/Ks Ratio 0.0627 (Ka = 0.0168, Ks = 0.2672)

SORL1 ENSG00000137642 (Human)

Gene Details

sortilin-related receptor, L(DLR class) A repeats containing

External Links

Gene Match (Ensembl Protein ID: ENSP00000260197, Human)

Protein Percentage 94.81%
CDS Percentage 90.79%
Ka/Ks Ratio 0.06493 (Ka = 0.0252, Ks = 0.3879)

Sorl1 ENSMUSG00000049313 (Mouse)

Gene Details

sortilin-related receptor, LDLR class A repeats-containing

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058613, Mouse)

Protein Percentage 92.95%
CDS Percentage 87.13%
Ka/Ks Ratio 0.05481 (Ka = 0.0347, Ks = 0.6329)

Sorl1 ENSRNOG00000024374 (Rat)

Gene Details

sortilin-related receptor, LDLR class A repeats-containing (Sorl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056722, Rat)

Protein Percentage 92.5%
CDS Percentage 87.2%
Ka/Ks Ratio 0.05829 (Ka = 0.0362, Ks = 0.6208)

Genome Location

Sequence Coding sequence

Length: 6645 bp    Location: 3749961..3583746   Strand: -
Raw sequence   
>XM_004870912.1
ATGGCGACACGGAGCAGCAGGAGGGAGTCGCGACTCCCTTTCCTATTCACCCTGGTCGTGCTGCTGCCGCCCGGGGCTCTCTGCGAGGACTGGACTCCGAGACTGCACGGGGGTCGCGCGCCCTTGCCCCAGGACAGGGGCTTCTTCGTGGTGCAGGGCGACCCGCGCGAGCTGCGGCTGTGGGCGCGCGAGGATGCCGGGGGGGTGAGCCCGGCGGACCAGAAGCACCTCCGGACGCGACGGAGCGCTGCCCTGCAGCCCCAGCCCATCGAGGTGTACGGACAGGTCAGTCTGAATGACTCCCACAATCAGATGGTGGTGCACTGGGCTGGAGAGAAAAGCAATGTTATTGTGGCCTTGGCCCGGGACAGCCTGGCATTGGCGAGGCCCAAGAGCAGTGATGTGTACGTGTCTTATGACTATGGAAAATCATTCAGTAAGATTTCAGAGAAGTTGAACTTTGGCATGGGAAATACCAGTGAAGCTGTGATTGCCCAGTTCTACCACAGTCCTGCAGACAACAAACGGTACATCTTTGCAGACACTTATGCCCAGTATCTTTGGATCACATTTGACTTTTGCAACACCATCCATGGCTTTTCCATCCCATTCCGGGCTGCTGATCTCCTCCTCCATAGTAAAGCCTCCAACCTTCTTCTGGGTTTCGACAGGTCTCACCCCAACAAACAGCTATGGAAGTCTGATGATTTTGGCCAGACTTGGATCATGATTCAGGAGCATGTGAAGTCCTTTACTTGGGGAATTGATCCCTATGACAAACCAAATACCATCTATATTGAGCGGCATGAACCCTCTGGCTACTCCACAGTTTTCAGAAGTACAGACTTTTTCCAGTCCCGGGAAAACCAGGAAGTCATTCTTGAAGAAGTGAGAGACTTTCAGCTTCGGGACAAGTACATGTTTGCTACAAAGGTGGTGCATCTCCTAGGCAATCACCAACAGTCTTCTGTCCAGCTCTGGGTCTCCTTTGGCCGGAAGCCCATGCGAGCAGCCCAGTTTGTCACAAGACATCCTATTAATGAATATTACATCGCAGATGCCTCGGAGGACCAGGTCTTTGTGTGTGTCAGTCATAGTAACAATTGTACAAATTTATACATCTCAGAGGCAGATGGGCTCAAGTTCTCTCTGTCCTTGGAGAATGTGCTGTACTACAGCCCAGGAGGGGCTGGCAGTGACACACTGGTGAGGTATTTTGCAAATGAGCCATTTGCTGACTTCCATCGTGTGGAAGGGTTGCAAGGAGTCTACATTGCTACTCTGATTAATGGTTCTATGAATGAAGAGAACATGAGATCAGTCATCACCTTTGACAAAGGGGGAACTTGGGAATTTATTCAAGCTCCAGCCTTCACAGAATATGGAGAGAAAATCAATTGTGAGCTTTCCCAGGGTTGTTCCCTGCACCTGGCCCAGCGTCTCAGTCAACTGCTCAACCTCCAGCTTCGGAGGATGCCCATCCTGTCCAAGGAGTCAGCCCCTGGCCTCATAATTGCCACGGGCTCAGTGGGAAAAAACCTGGCAAGCAAGACCAATGTGTACATCTCTAGCAGCGCGGGAGCCAGGTGGCGAGAGGCACTTCCTGGACCTCACTACTATACGTGGGGAGACCATGGCGGCATCATCATGGCCATTACCCAGGGAATGGAAACCAATGAGCTGAAATACAGTACCAATGAAGGGGAGACGTGGAAGACATACATTTTCTCTGAGAAGCCTGTGTTTGTGTATGGGCTCCTCACAGAGCCCGGGGAGAAGAGCACTGTCTTCACCATTTTTGGATCCAACAAGGAAAATGTCCACAGCTGGCTCATCCTCCAGGTCAATGCCACTGATGCCTTGGGGGTTCCCTGCACAGAGAACGACTACAAGCTATGGTCACCTTCTGATGAGCGGGGCAATGAGTGTTTGCTCGGACACAAGACTGTCTTCAAACGGAGGACCCCCCACGCAACCTGCTTTAATGGAGAAGACTTTGATAGGCCAGTGGTCGTGTCCAACTGCTCCTGCACCCGGGAAGACTATGAATGTGACTTCGGCTTTAAGATGAGTGAAGATTTGTCCTTAGAAGTATGTGTTCCAGACCCGGAATTTTCTGGAAGGCCATATTCCCCGCCTGTGCCTTGCCCCATGGGTTCTACTTACAGGAGAACAAGAGGCTACCGGAAGATTTCTGGAGACACTTGCAGTGGAGGAGATGTCGAAGCACGACTGGAAGGAGAACTGGTCCCTTGTCCACTGGAAGAGGAGAATGAGTTCATCTTGTATGCAATGCGGAAGTCCATCCACCGCTACAACCTTGCATCTGGAGCAACTGAGCAGTTGCCACTCACAGGGCTGCGGGCAGCGGTGGCCCTAGACTTTGACTATGAGCGCAACTGCTTGTATTGGTCTGACCTGGCCTTGGACATCATCCAGCGGCTTTGTTTGAATGGGAGTACTGGGCAAGAAGTGATCATCAATTCTGGCCTGGAGACAGTAGAAGCTTTGGCCTTCGAGCCCCTCAGCCAGTTGCTTTACTGGGTGGATGCTGGATTTAAAAAGATTGAGGTAGCTAACCCAGATGGTGACTTCCGACTCACAATCGTCAATTCCTCTGTGCTTGATCGGCCCAGGGCCCTGGTCCTCGTGCCCCAAGAAGGAGTGATGTTCTGGACTGACTGGGGAGACTTGAAGCCAGGAATTTATCGGAGCAATATGGATGGTTCTTCTGCCCATCGTCTTGTGTCAGAGGATGTGAAGTGGCCCAATGGCATCTCAGTGGATGACCAGTGGATCTACTGGACGGATGCCTACCTGGACTGCATCGAGCGCATCACCTTCAGTGGCCAGCAGCGCTCGGTTATCCTGGACAACCTCCCGCATCCCTATGCCATTGCTGTCTTTAAGAATGAAATCTACTGGGATGATTGGTCACAGCTCAGCATATTCCGAGCTTCCAAATACAGCGGGTCCCAGATGGAGATTCTGGCCAGCCAGCTCACAGGGCTGATGGACATGAAGATATTCTACAAGGGGAAAAACACTGGAAGCAATGCCTGTGTACCCAGTCCGTGCAACCTTCTGTGCCTGCCCAAGGCCAACAATGGCAAAAGCTGCAGGTGTCCAGAGGGAGTGGCCAGCAGTGTCCTCCCTTCTGGGGACCTGATGTGTGACTGCCCTCAGGGCTATCAGCTGAAGAACAATACCTGTGTCAAAGAAGAGAACACCTGTCTTCGCAGCCAGTATCGCTGCAGCAACGGGAACTGTATCAACAGCATTTGGTGGTGCGATTTCGACAATGACTGTGGGGACATGAGCGATGAGAGGAACTGCCCTACCACCATCTGCGATCTGGACACCCAGTTCCGGTGCCAGGAGTCTGGGACTTGTATCCCCCTGTCCTATAAATGTGACCTTGAGGATGACTGTGGAGACAACAGTGACGAAAGACACTGTGAAATGCACCAGTGCCGGAGTGATGAGTACAACTGCAGCTCTGGCATGTGCATCCGCTCCTCCTGGGTGTGTGATGGGGACAATGACTGCAGGGACTGGTCCGATGAAGCCAACTGTACCGCTATCTATCACACCTGTGAGGCCTCCAACTTTCAGTGCCGCAATGGCCACTGCATCCCCCAGCGGTGGGCGTGTGATGGTGACACAGATTGCCAGGATGGTTCTGATGAGGATCCTGTCAACTGTGAGAAGAAATGCAATGGATTCCGTTGCCCCAATGGCACATGTATCCCATCTAGCAAACACTGCGATGGTCTACGGGATTGCTCTGATGGCTCTGATGAACAGCACTGTGAGCCCCTCTGTACACGCTTCATGGACTTCGTGTGCAAGAACCGCCAGCAGTGCCTGTTCCACTCCATGGTGTGTGATGGGATCATCCAGTGCCGGGATGGATCAGATGAGGATCCTGCCTTTGCCGGATGCTCCCATGATCCTGAGTTCCACAAGGTGTGTGATGCATTCGGTTTCCAGTGTCAGAATGGAGTGTGCATCAGTTTGATTTGGAAATGCGATGGGATGGATGACTGCGGCGATTACTCTGATGAAGCCAACTGTGAAAACCCCACAGAAGTGCCAAACTGTTCCCGATACTTCCAGTTCCGGTGTGAAAATGGCCACTGCATCCCCAACAGGTGGAAGTGTGATGGGGAGAATGACTGTGGGGACTGGTCCGAAGAGAAGGATTGTGGAGATTCAAACCTTCTTCCCTCCCCCACACCTGGGCCCTCCACGTGTCTGCCCAATTACTTCCGCTGTAGCACCGGGGCCTGCGTGATGGACACCTGGGTGTGCGACGGGTACCGAGACTGTGCAGATGGCTCAGATGAGGAAGCCTGCCCCTCGCTTGCAAATGTTACTGCCCCCTCCACTCCCACCCAGCTTGGGAGATGTGACCGATTTGAATTTGAGTGCCACCAACCAAAGAAGTGCATCCCCAACTGGAAGCGCTGTGACGGCCATCAGGATTGTCAAGATGGTGAGGATGAGGCCAATTGCCCCACACACAGCTCCTTGACCTGTATGAGCAGGGAGTTCAAGTGTGAAGATGGGGAGGCCTGCATTGTTCTCTCAGAGCGCTGTGATGGCTTCCTGGACTGCTCGGACGAGAGTGATGAGAAGGCCTGCAGTGATGAGTTAACTGTATACAAAGTACAGAATCTTCAGTGGACAGCTGACTTCTCTGGGGACGTAACTTTGACCTGGATGAGGCCCAAAAAAATCCCCTCTACTTCTTGTGTGTATAACATCTACTACAGAGTGGTTGGAGAGAGCATATGGAAGACTCTGGAGACCCACAGCAATAAAACAAACACTGTATTGAAAGTCTTGAAACCAGATACCACATATCAGGTTAAAGTACAGATTCAATGTCTGAGCAAGGCACACAACACCAATGACTTTGTCACCCTGAGGACTCCAGAAGGATTGCCAGATGCCCCTCGAAATCTGCAGCTCTCGCTGCACAGGGAAGCAGAAGGTGTGATTGTTGGACACTGGACTCCTCCCATCCATGCCCACGGTCTCATTCGTGAGTACATTGTAGAATACAGCAGGAGTGGTTCCAAGATGTGGGCCTCCCAGAGGGCTGCTAGTAATGCTACAGAAATAAAGAACTTACTGGTCAATGCTCTATACACTGTCAGAGTGGCTGCGGTGACTAGTCGTGGAATAGGAAACTGGAGCGATTCTAAATCCATTACCACCATAAAAGGAAAAGTGATTCCACCACCAGATATCCACATTGACAGCTATGATGAAAATTCTCTAAGCTTCACCCTGACGATGGATGGTGATATCAAGGTGAATGGCTATGTAGTGAACCTGTTCTGGGCATTTGACACCCACAAACAAGAAAAGAGAACCTTGAGCTTCCGAGGGAGCACATTGTCACACAAAGTTGACAATCTGACAGCTCATACGTCCTATGAGATTTCTGTCTGGGCCAAGACTGACTTGGGGGACAGTCCTCTGGCATTTGAGCATGTCATGACCAGAGGAGTTTGCCCACCAGCTCCTAGCCTCAAAGCCAAGGCTATCAACCAGACTGCAGTGGAATGTACCTGGACTGGCCCCAGGAATGTGGTTTATGGTATTTTCTATGCCACATCCTTTCTTGATCTCTATCGAAGCCCAAAGAGTGTGACCACTTCACTCCACAATAAGACAGTCATTGTTGGTAAAGATGAGCAGTATTTGTTTCTGGTGCGGGTGTTGGTTCCTTACCAAGGGCCGTCCTCTGACTACGTTGTTGTGAAGATGATCCCAGACAGCAGGCTTCCACCCCGTCACCTGCATGCAGTTCATACAGGCAAAACCTCAGCCATCATCAAGTGGGAATCCCCATACGACTCTCCTGACCAGGACCTGTTCTATGCAATTGCAGTTAAAGATCTGATTAGAAAGACCGACAGGAGCTACAAAGTAAAATCCCAAAACAGTACTGTGGAGTATACCATCGGCAAGTTGGAGCCTGGAGGGAAATACCATATAATTGTCCAACTGGGGAACATGAGCAAAGATTCCAGCATAAAAATTACTACAGTTTCATTATCAGCACCTGATGCCTTAAAAATCATAACAGAAAATGACCATGTTCTTCTTTTTTGGAAAAGTCTTGCTTTAAAGGAAAAACATTTCAATGAAAGCAGAGGCTACGAGATACACATGTTTGATAGTGCCATGAATATCACAGCATACCTTGGGAATACTACTGACAATTTCTTTAAAATTTCCAACCTGAAGATGGGCCATAACTACACTTTCACCGTCCAGGCACGATGCCTTTTTGGCAGCCAGATCTGTGGGGAACCTGCTGTCCTGCTGTATGATGAGCTGGGGTCTAGTGGAGACATGGCAGCAGTACAGGCTTCCAGGTCCACTGATGTCGCTGCAGTGGTAGTTCCTATCTTGTTCCTGATACTGCTGAGCCTGGGAGTCGGGTTTGCCATCCTGTACACCAAGCACCGGAGACTGCAGAGCAGCTTCACTGCTTTTGCCAACAGCCACTACAACTCCAGGCTGGGCTCAGCCATCTTCTCCTCAGGGGATGACCTGGGGGAAGATGATGAAGATGCTCCTATGATAACTGGATTTTCAGATGATGTCCCCATGGTGATAGCCTGA

Related Sequences

XP_004870969.1 Protein

Sorl1 PREDICTED: sortilin-related receptor [Heterocephalus glaber]

Length: 2214 aa      View alignments
>XP_004870969.1
MATRSSRRESRLPFLFTLVVLLPPGALCEDWTPRLHGGRAPLPQDRGFFVVQGDPRELRLWAREDAGGVSPADQKHLRTRRSAALQPQPIEVYGQVSLNDSHNQMVVHWAGEKSNVIVALARDSLALARPKSSDVYVSYDYGKSFSKISEKLNFGMGNTSEAVIAQFYHSPADNKRYIFADTYAQYLWITFDFCNTIHGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQLWKSDDFGQTWIMIQEHVKSFTWGIDPYDKPNTIYIERHEPSGYSTVFRSTDFFQSRENQEVILEEVRDFQLRDKYMFATKVVHLLGNHQQSSVQLWVSFGRKPMRAAQFVTRHPINEYYIADASEDQVFVCVSHSNNCTNLYISEADGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGLQGVYIATLINGSMNEENMRSVITFDKGGTWEFIQAPAFTEYGEKINCELSQGCSLHLAQRLSQLLNLQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYISSSAGARWREALPGPHYYTWGDHGGIIMAITQGMETNELKYSTNEGETWKTYIFSEKPVFVYGLLTEPGEKSTVFTIFGSNKENVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNECLLGHKTVFKRRTPHATCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLSLEVCVPDPEFSGRPYSPPVPCPMGSTYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLEEENEFILYAMRKSIHRYNLASGATEQLPLTGLRAAVALDFDYERNCLYWSDLALDIIQRLCLNGSTGQEVIINSGLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSNMDGSSAHRLVSEDVKWPNGISVDDQWIYWTDAYLDCIERITFSGQQRSVILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILASQLTGLMDMKIFYKGKNTGSNACVPSPCNLLCLPKANNGKSCRCPEGVASSVLPSGDLMCDCPQGYQLKNNTCVKEENTCLRSQYRCSNGNCINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDERHCEMHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCEASNFQCRNGHCIPQRWACDGDTDCQDGSDEDPVNCEKKCNGFRCPNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTRFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDPAFAGCSHDPEFHKVCDAFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEVPNCSRYFQFRCENGHCIPNRWKCDGENDCGDWSEEKDCGDSNLLPSPTPGPSTCLPNYFRCSTGACVMDTWVCDGYRDCADGSDEEACPSLANVTAPSTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQDGEDEANCPTHSSLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDEKACSDELTVYKVQNLQWTADFSGDVTLTWMRPKKIPSTSCVYNIYYRVVGESIWKTLETHSNKTNTVLKVLKPDTTYQVKVQIQCLSKAHNTNDFVTLRTPEGLPDAPRNLQLSLHREAEGVIVGHWTPPIHAHGLIREYIVEYSRSGSKMWASQRAASNATEIKNLLVNALYTVRVAAVTSRGIGNWSDSKSITTIKGKVIPPPDIHIDSYDENSLSFTLTMDGDIKVNGYVVNLFWAFDTHKQEKRTLSFRGSTLSHKVDNLTAHTSYEISVWAKTDLGDSPLAFEHVMTRGVCPPAPSLKAKAINQTAVECTWTGPRNVVYGIFYATSFLDLYRSPKSVTTSLHNKTVIVGKDEQYLFLVRVLVPYQGPSSDYVVVKMIPDSRLPPRHLHAVHTGKTSAIIKWESPYDSPDQDLFYAIAVKDLIRKTDRSYKVKSQNSTVEYTIGKLEPGGKYHIIVQLGNMSKDSSIKITTVSLSAPDALKIITENDHVLLFWKSLALKEKHFNESRGYEIHMFDSAMNITAYLGNTTDNFFKISNLKMGHNYTFTVQARCLFGSQICGEPAVLLYDELGSSGDMAAVQASRSTDVAAVVVPILFLILLSLGVGFAILYTKHRRLQSSFTAFANSHYNSRLGSAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA