Sequence details NCBI ID: XM_004870833.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cldn10
Gene Name claudin 10, transcript variant X5
Entrez Gene ID 101707843

Database interlinks

Part of NW_004624879.1 (Scaffold)

For more information consult the page for NW_004624879.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLDN10 ENSCPOG00000003817 (Guinea pig)

Gene Details

claudin 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003445, Guinea pig)

Protein Percentage 85.92%
CDS Percentage 85.45%
Ka/Ks Ratio 0.22312 (Ka = 0.0928, Ks = 0.4161)

CLDN10 ENSG00000134873 (Human)

Gene Details

claudin 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000299339, Human)

Protein Percentage 67.19%
CDS Percentage 73.44%
Ka/Ks Ratio 0.38372 (Ka = 0.2524, Ks = 0.6579)

Cldn10 ENSMUSG00000022132 (Mouse)

Gene Details

claudin 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000097889, Mouse)

Protein Percentage 65.8%
CDS Percentage 71.33%
Ka/Ks Ratio 0.31948 (Ka = 0.2637, Ks = 0.8255)

Cldn10 ENSRNOG00000010085 (Rat)

Gene Details

claudin 10 (Cldn10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013520, Rat)

Protein Percentage 84.97%
CDS Percentage 81.69%
Ka/Ks Ratio 0.14871 (Ka = 0.0968, Ks = 0.6509)

Genome Location

Sequence Coding sequence

Length: 582 bp    Location: 2178855..2298924   Strand: +
Raw sequence   
>XM_004870833.1
ATGTCCACTGCTCAGATCTCGGCTCTGGTGTTCGGGGTCGGAGGGTTCGGGGCCCTCGTCGCTGCCACCACGTCCAACGAGTGGAAAGTGACCACGCGGGCGTCCTCGGTGATAACCGCTACGTGGGTTTACCAGGGGCTGTGGATGAACTGCGCAGGTAACGCGTTGGGTTCTTTCCATTGCCGACCGCATTTTACCATCTTCAAAGTAGAAGGCTATATCCAGGCATGTAGAGGACTTATGATCGCTGCTGTCAGCCTGGGCTTTTTTGGTTCCGTATTTGCACTCTTCGGAATGAAGTGTACCAAAGTTGGAGGCTCAGAGAAATCCAAAGCTAAAATCGCTTGTTTGGCTGGAATTGTATTCATACTGTCAGGGCTGTGCTCAATGACCGGCTGTTCCCTGTACGCAAACAAAATCACAACAGAGTTCTTTGATCCTCTCTTTGTGGAGCAAAAAATGGGCTATGCATACAACGGAGCCACATCAATCATGTCTTCTCGGACAAAGTATCATGGCGGAGAAGGAGATTTTAAAACCACAAGCCCTTCAAAACAGTTTGATAAAAATGCTTATGTTTGA

Related Sequences

XP_004870890.1 Protein

Cldn10 PREDICTED: claudin-10A isoform X5 [Heterocephalus glaber]

Length: 193 aa      View alignments
>XP_004870890.1
MSTAQISALVFGVGGFGALVAATTSNEWKVTTRASSVITATWVYQGLWMNCAGNALGSFHCRPHFTIFKVEGYIQACRGLMIAAVSLGFFGSVFALFGMKCTKVGGSEKSKAKIACLAGIVFILSGLCSMTGCSLYANKITTEFFDPLFVEQKMGYAYNGATSIMSSRTKYHGGEGDFKTTSPSKQFDKNAYV