Details from NCBI annotation

Gene Symbol Gpc6
Gene Name glypican 6, transcript variant X2
Entrez Gene ID 101702203

Database interlinks

Part of NW_004624879.1 (Scaffold)

For more information consult the page for NW_004624879.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPC6 ENSG00000183098 (Human)

Gene Details

glypican 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000366246, Human)

Protein Percentage 97.84%
CDS Percentage 91.89%
Ka/Ks Ratio 0.0259 (Ka = 0.0104, Ks = 0.4027)

Gpc6 ENSMUSG00000058571 (Mouse)

Gene Details

glypican 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000120362, Mouse)

Protein Percentage 96.4%
CDS Percentage 89.67%
Ka/Ks Ratio 0.0276 (Ka = 0.0165, Ks = 0.5962)

Genome Location

Sequence Coding sequence

Length: 1668 bp    Location: 97188..1193662   Strand: +
>XM_004870815.1
ATGCCTTCTTGGATCGGGGCTGTGATTCTTCCCCTCTCGGGGCTGCTGTGGTCCCTCCCGGCCGGGGCGGATGTGAAGGCTCGGAGCTGCGGCGAGGTCCGCCTGGCGTACGGTGCCAAGGGATTCAGCCTGGCGGACATCCCGTACCAGGAGATCGCAGGGGAGCACTTAAGAATCTGTCCTCAGGAATACACATGCTGCACCACAGAGATGGAAGACAAGTTAAGCCAGCAAAGCAAACTCGAGTTTGAAAACCTTGTGGAAGAGACGAGCCATTTTGTGCGTACCACCTTTGTGTCGAGGCACAAGAAATTTGATGAATTTTTCCGGGAGCTGCTGGAGAATGCTGAGAAGTCCCTAAATGACATGTTTGTCCGGACCTATGGGATGCTGTACATGCAGAATTCGGAAGTGTTCCAGGATCTCTTCACAGAGCTGAAGAGATACTACACTGGAGGCAACGTGAACCTAGAGGAGATGCTCAATGATTTCTGGGCTCGGCTCCTGGAGCGGATGTTCCAGCTGATAAACCCTCAGTATCACTTCAGCGAGGACTACTTGGAATGTGTGAGCAAATACACAGACCAGCTGAAGCCCTTTGGAGACGTGCCCCGGAAGCTGAAGATTCAGGTCACCCGCGCCTTCATTGCTGCCCGCACCTTCGTCCAGGGGCTCACCGTGGGCAGAGAGGTGGCGAACCGAGTTTCCAAGGTGAGCCCCACCCCTGGGTGTATCCGTGCACTAATGAAGATGCTGTACTGCCCCTACTGTCGAGGACTGCCCACTGTGAGACCCTGCAACAACTACTGCCTCAATGTCATGAAGGGTTGCTTGGCCAATCAAGCTGATCTGGACACCGAGTGGAACCTGTTTATAGATGCAATGCTCTTGGTGGCAGAGCGACTGGAAGGGCCATTCAACATTGAGTCGGTCATGGACCCCATAGATGTCAAGATTTCTGAAGCCATTATGAACATGCAGGAAAACAGCATGCAGGTGTCTGCAAAGGTCTTCCAGGGATGTGGCCAGCCCAAACCTGCTCCAGGCCTCAGATCTGCCCGCTCAGCTCCTGAGAATTTTAACACACGTTTTAGGCCCTACAATCCTGAAGAAAGACCCACAACTGCTGCAGGCACAAGCTTGGACCGGCTGGTCACAGACATAAAAGAGAAATTGAGGCTCTCTAAAAAGGTCTGGTCGTCACTGCCCTACACCATCTGCAAGGATGAGAGTGTGACGGCGGGCACGTCCAACGAGGAGGAATGCTGGAACGGGCACAGCAAAGCCAGATACTTGCCTGAGATCATGAATGATGGGCTGACCAACCAGATCAACAACCCCGAGGTGGACGTGGACATCACTCGGCCCGACACTTTCATCAGACAGCAGATCATGGCTCTCCGCGTGATGACCAACAAATTGAAGAATGCATACAATGGCAACGATGTCAACTTCCAGGACACAAGCGATGAATCCAGTGGCTCAGGAAGTGGCAGTGGTTGCATGGATGACGTGTGTCCCACAGAGTTCGAGTTTGTCACCACCGAGGCCCCTGCAGCCGACCCTGACAGGAGAGAAGAGGACTCTTCAGCATCCCAGCTTGGCCACTCGCTGCTCTCCTGGTCTCTGGTCTGTGTGGTCCTGGCACTGCAGAGACTCTGCAGATAA

Related Sequences

XP_004870872.1 Protein

Gpc6 PREDICTED: glypican-6 isoform X2 [Heterocephalus glaber]

Length: 555 aa     
>XP_004870872.1
MPSWIGAVILPLSGLLWSLPAGADVKARSCGEVRLAYGAKGFSLADIPYQEIAGEHLRICPQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPGLRSARSAPENFNTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLRLSKKVWSSLPYTICKDESVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAADPDRREEDSSASQLGHSLLSWSLVCVVLALQRLCR