Sequence details NCBI ID: XM_004870787.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Trpv2
Gene Name transient receptor potential cation channel, subfamily V, member 2
Entrez Gene ID 101704733

Database interlinks

Part of NW_004624877.1 (Scaffold)

For more information consult the page for NW_004624877.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRPV2 ENSCPOG00000012694 (Guinea pig)

Gene Details

transient receptor potential cation channel, subfamily V, member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011419, Guinea pig)

Protein Percentage 74.93%
CDS Percentage 79.39%
Ka/Ks Ratio 0.31102 (Ka = 0.181, Ks = 0.5821)

TRPV2 ENSG00000187688 (Human)

Gene Details

transient receptor potential cation channel, subfamily V, member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000342222, Human)

Protein Percentage 72.26%
CDS Percentage 76.93%
Ka/Ks Ratio 0.29421 (Ka = 0.2068, Ks = 0.7029)

Trpv2 ENSMUSG00000018507 (Mouse)

Gene Details

transient receptor potential cation channel, subfamily V, member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018651, Mouse)

Protein Percentage 72.98%
CDS Percentage 73.4%
Ka/Ks Ratio 0.18639 (Ka = 0.213, Ks = 1.1429)

Trpv2 ENSRNOG00000003104 (Rat)

Gene Details

transient receptor potential cation channel, subfamily V, member 2 (Trpv2), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004248, Rat)

Protein Percentage 72.63%
CDS Percentage 73.23%
Ka/Ks Ratio 0.17291 (Ka = 0.2102, Ks = 1.2156)

Genome Location

Sequence Coding sequence

Length: 2211 bp    Location: 4034495..4004974   Strand: -
Raw sequence   
>XM_004870787.1
ATGACCTCGCCTTCCAGCCCCCCAGCTTTCAGGCTGGAGACATCAGATGGAGGCCAAGAAGGTGGCACTGAGGGGGTCAAAGGAAAGCATGGCCTGCCCCCCATGGAGTCACCATTCCAGGGTGAGGACCGGAACTCCTCCCCTCAGATCAGAGTGAACCTCAACTACTGGAAGAGAGCTGATGCCAGCCAGCCGGACCCAGACCGCTTTGACCGTGACCGCCTCTTCAGTGCAGTCTCCCGGGGAGTTCCTGAGGATCTGGCTGGGCTGCCAGAGTATCTGCGCCGGACCAGCAAGTACCTCACCGACTCAGAGTACACAGAGGGCTCCACGGGCAAAACGTGCCTGATGAAGGCTGTGCTGAACCTTCAGAACGGGGTCAACACCTGCATCCTGCCACTGCTGCAGATCGACCGAGACTCTGGCAATCCCCAGCCACTGGTCAACGCCCAGTGTACAGATGAGTACTACCGAGGTCACAGCGCCCTGCACATTGCCATTGAGAAGAGGAGCCTGCAATGTGTGAAGCTTCTGGTGGAGAATGGGGCCAACGTGCATGCCCGGGCTTGTGGCCACTTCTTCCAGAAGAGGCAAGGAACTTGCTTCTATTTTGGCGAGCTGCCCCTCTCTCTGGCTGCATGCACCAAGCAGTGGGATGTGGTGAGCTACCTCCTGGAGAACCCGTACCAGCCCGCCAGCCTGCAGGCTGCTGACTCCTTGGGCAACACTGTTCTGCATGCCCTGGTGATGATCGCAGACAACTCTGAAGAGAACAGCAAACTGGTGATCCGCATGTACGATGCGGTCCTCAAGGCAGGAGCCCGCCTCTGCCCCACTGTGCAGCTTGAGAACATTCAAAACCTGCAGGGTCTCACGCCCTTGAAGCTGGCTGCCAAGGAGGGCAAAATTGAGGTGAGCCACCGTTCCCCTTCCCTTCCTCACCTCTCCAGACAGCAGCTCTCCTCTTTCCCCCAGCACCGACATCGAATGGTAGTTTTGGAGCCACTGAACAAACTGCTGCAGGCGAAATGGGATCAGTTTATCTCCAAGTTCTTCTTCAACTTCCTGTGTTATCTGATCTACATGCTCATTTTCACTGCTGTTGCCTACCACCAGCCAGCCCTGGACCAGCAGGCCTTCTCATGGCTGGATTCATCACCCGGAATGTGGCTTCTGCTGGGCCACATCTTCATCCTTCTTGGGGGGATCTACCTCCTCCTTGTCCAGCTGTGGTGCTTCTGGCGGCGCCGCCTGTTCATCTGGATCTCATTCATGGACAGCTACTTTGAAATCCTCTTCCTGGCCCAGGCCCTGCTCACAGTGCTATCCCAGGTCTTGCGTTTCTCGTCCATTGAGTGGTACCTGCCCCTGCTTGTGTCCTCACTGGTGCTGGGCTGGCTGAACCTGCTTTACTACACACGAGGCTTCCAGTACACGGGCATCTACAGTGTCATGATCCAGAAGGTTATCCTGCGGGACCTACTCCGCTTCCTGCTGGTCTACTTAGTCTTCCTTTTTGGCTTCGCTATTGCCCTGGTGAGCCTGAGCCGGGAGTCCCGGGGCCCCAAAGTCCCTGCAAGCGTCAATGCCACAGAGGTTGCTCAGGCTGGGATAGGACAGGAGGACGAGGTGGCCCCGTACAGGACCATCCTAGATGCCTCATTGGAGCTCTTCAAATTCACCATCGGCATGGGCGAGCTGGCCTTCCAGGACCAGCTGCGCTTCCGCGGGGTGGTGTTGTTGCTGCTGCTGGCCTACGTTATGCTCACCTACGTCCTGCTGCTCAACATGCTTATCGCCCTCATGAGTGAGACAGTCAACAGTGTTGCCACCGACAGCTGGAGCATTTGGAAGCTACAGGTGCCAGAGTGGCATTTCTTGGGGCCTGAGGGCAATGCCTATAAGCCAGCCTCATGGATCCTGAGCTTTTCCACATTACGCCGGCTCCTTCACATCCTGCAGAAGCCATTTCTTATGCCTCTCTTCATCTCTGTGCGCTGTCTTCTCCATTTTAGCACAGGATGCCCTTCCTGCCCCTACCCAGCTGTCTTCATGAAGACCTACTCCTTCCTCCCACCTCATATACCTCGTCCAAGGATTAGCGCTCTATGCAGCCTACCCTTTCTGAATTTACAGCGATCCTCCCGCCTCGCTTCCAGAGTGCTGAGATACACGCGTATCCCACCACGCCAGGCAGCCTACCCTTTCTGA

Related Sequences

XP_004870844.1 Protein

Trpv2 PREDICTED: transient receptor potential cation channel subfamily V member 2 [Heterocephalus glaber]

Length: 736 aa      View alignments
>XP_004870844.1
MTSPSSPPAFRLETSDGGQEGGTEGVKGKHGLPPMESPFQGEDRNSSPQIRVNLNYWKRADASQPDPDRFDRDRLFSAVSRGVPEDLAGLPEYLRRTSKYLTDSEYTEGSTGKTCLMKAVLNLQNGVNTCILPLLQIDRDSGNPQPLVNAQCTDEYYRGHSALHIAIEKRSLQCVKLLVENGANVHARACGHFFQKRQGTCFYFGELPLSLAACTKQWDVVSYLLENPYQPASLQAADSLGNTVLHALVMIADNSEENSKLVIRMYDAVLKAGARLCPTVQLENIQNLQGLTPLKLAAKEGKIEVSHRSPSLPHLSRQQLSSFPQHRHRMVVLEPLNKLLQAKWDQFISKFFFNFLCYLIYMLIFTAVAYHQPALDQQAFSWLDSSPGMWLLLGHIFILLGGIYLLLVQLWCFWRRRLFIWISFMDSYFEILFLAQALLTVLSQVLRFSSIEWYLPLLVSSLVLGWLNLLYYTRGFQYTGIYSVMIQKVILRDLLRFLLVYLVFLFGFAIALVSLSRESRGPKVPASVNATEVAQAGIGQEDEVAPYRTILDASLELFKFTIGMGELAFQDQLRFRGVVLLLLLAYVMLTYVLLLNMLIALMSETVNSVATDSWSIWKLQVPEWHFLGPEGNAYKPASWILSFSTLRRLLHILQKPFLMPLFISVRCLLHFSTGCPSCPYPAVFMKTYSFLPPHIPRPRISALCSLPFLNLQRSSRLASRVLRYTRIPPRQAAYPF