Sequence details NCBI ID: XM_004870691.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rhot1
Gene Name ras homolog family member T1
Entrez Gene ID 101723834

Database interlinks

Part of NW_004624875.1 (Scaffold)

For more information consult the page for NW_004624875.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RHOT1 ENSCPOG00000007927 (Guinea pig)

Gene Details

ras homolog family member T1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007136, Guinea pig)

Protein Percentage 97.62%
CDS Percentage 94.15%
Ka/Ks Ratio 0.07019 (Ka = 0.0158, Ks = 0.2247)

RHOT1 ENSG00000126858 (Human)

Gene Details

ras homolog family member T1

External Links

Gene Match (Ensembl Protein ID: ENSP00000351132, Human)

Protein Percentage 96.51%
CDS Percentage 92.87%
Ka/Ks Ratio 0.07304 (Ka = 0.0208, Ks = 0.2851)

Rhot1 ENSMUSG00000017686 (Mouse)

Gene Details

ras homolog gene family, member T1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000057669, Mouse)

Protein Percentage 95.39%
CDS Percentage 89.68%
Ka/Ks Ratio 0.06138 (Ka = 0.0266, Ks = 0.434)

Rhot1 ENSRNOG00000004093 (Rat)

Gene Details

ras homolog gene family, member T1 (Rhot1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006218, Rat)

Protein Percentage 94.77%
CDS Percentage 89.33%
Ka/Ks Ratio 0.06804 (Ka = 0.0301, Ks = 0.4429)

Genome Location

Sequence Coding sequence

Length: 2436 bp    Location: 242685..311028   Strand: +
Raw sequence   
>XM_004870691.1
ATGCGTGCGGGCCGAGCTCGGCCCCAGCGAGCCGCCGACATGAAGAAAGACGTGCGGATCCTGCTAGTGGGAGAACGTGAGTCCGCGCGCCTGGGCCGCCTCAGCCCTGCGCCGACCTCGACCCCGATTCTGACCCTGACCCCAGCCCCGGCGCTCCTCACCTCCGCGCCTCTGCCGCCTTCTCCCCGTGCCCCCGCGCCTCTCAGCCCCTGCACTCTTCTCTTCCGCTGCCCGCCGGTGGCCCTGGCCCGCTCACCTCACCTGGGCCCTCTCGAGAGCTCCCCTTCCTGTCCCCGAGCGCTCCCCGCAAGCCGAGTCCCTTTCAGCCGCGAACACCCGACCCCAGCTGTCTGGAGCTCCTCTCTTTTTCCTCCTGGGCCCCACTGTTTCCCAGGCCGCCTCTTTCCAGACCCTCCTGTCTTCCTTGGAGAGTCCCTTGTCTGTCACTGCCAGGCAGATGCTGGGACTGGCAGGCTGGCCAATTGGGAGTACAGGAACCGGCTCTTGGGAAGCCAGGGGGAGGGGTGCAGAAGTAGTCGACTTGTGGGCAAGGTTCCCCCTCGGGCAGAAGAAATCACCATTCCGGCTGATGTCACCCCTGAGAGAGTCCCAACACACATTGTGGATTACTCAGAAGCAGAACAGAGTGATGAACAACTTCATCAAGAAATATCACAGGCTAATGTCATCTGCATAGTTTATGCTGTTAACAACAAACATTCTATTGATAAGGTAACAAGTCGATGGATTCCTCTCATAAATGAAAGAACAGATAAAGACAGCAGGCTGCCTTTGATACTGGTTGGGAACAAATCTGATCTTGTGGAATATAGTAGTATGGAGACCATCCTTCCAATTATGAATCAGTATACAGAAATAGAAACCTGTGTGGAGTGTTCAGCAAAAAATCTGAAGAACATATCAGAGCTCTTTTATTATGCACAGAAAGCTGTACTTCATCCTACAGGCCCACTGTACTGCCCAGAGGACAAGGAGATGAAACCAGCCTGTATAAAAGCCCTTACTCGTATATTTAAAATCTCTGATCAAGATAATGATGGTACACTCAATGATGCTGAACTCAACTTCTTTCAGAGGATTTGTTTCAACACTCCATTAGCTCCTCAGGCTCTGGAAGATGTCAAGAATGTAGTCAGAAAACACATCAGTGATGGTGTGGCTGACAGTGGATTGACATTGAAAGGTTTTCTCTTTTTACACACACTTTTTATTCAGAGAGGGAGACACGAAACTACTTGGACTGTACTTCGACAATTTGGTTATGATGATGATCTAGATTTGACACCTGAATATTTATTCCCCATGCTGAAAATACCTCCTGATTGCACTACTGAATTAAATCATCATGCGTATTTGTTTCTCCAAAGCACCTTTGACAAACATGATTTGGATAGAGACTGTGCTTTGTCACCTGATGAGCTTAAAGATTTATTTAAAGTTTTCCCTTACATACCTTGGGGGCCTGATGTGAATAACACAGTTTGTACAAATGAAAGAGGTTGGATAACCTACCAGGGATTCCTTTCCCAGTGGACGCTCACGACGTATTTAGATGTTCAGAGATGCCTGGAGTATTTGGGCTATCTAGGTTATTCCATATTGACTGAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACAAGAGATAAAAAGATAGATCTGCAGAAGAAACAGACTCAAAGAAATGTTTTTAGATGTAATGTAATTGGAATGAAAAGCTGTGGGAAAAGTGGAGTTCTTCAGACTCTTCTTGGAAGAAACTTAACGAGGCAGAAGAAAATTCGTGATGATCATAAATCTTACTATGCAATCAACACTGTTTATGTGTATGGACAGGAGAAATACTTATTGTTGCATGACATCTCAGAATCGGAATTTCTGACTGAGGCCGAGATCATTTGTGACGTTGTATGCCTGGTGTATGATGTCACTAACCCCAAATCCTTTGAATACTGTGCCAGGATTTTTAAGCAACACTTCATGGATAGCAGAATACCCTGCTTAATCGTAGCTGCAAAATCAGACCTGCATGAAGTTAAACAAGAATATAGTATCTCACCTACTGATTTCTGCAGGAAACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAACACTGCTGATGCACCCAGTAAGGATATCTTTGTTAAACTGACAACAATGGCCATGTACCCCCATGCCCGGTTACGCTGTATGTGCACCTGCAACAGGTGTACATTTTGCATCTGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCTGTAAAGAACAAAATCTTCACTGCAGTTCTTAACAGGCACGTGACACAAGCCGACCTCAAGAGTTCCACATTTTGGCTTCGAGCAAGTTTCGGTGCTACTGTTTTTGCAGTTTTGGGCTTTGCCATGTACAAAGCTTTATTGAAACAGCGATGA

Related Sequences

XP_004870748.1 Protein

Rhot1 PREDICTED: mitochondrial Rho GTPase 1 [Heterocephalus glaber]

Length: 811 aa      View alignments
>XP_004870748.1
MRAGRARPQRAADMKKDVRILLVGERESARLGRLSPAPTSTPILTLTPAPALLTSAPLPPSPRAPAPLSPCTLLFRCPPVALARSPHLGPLESSPSCPRALPASRVPFSREHPTPAVWSSSLFPPGPHCFPGRLFPDPPVFLGESLVCHCQADAGTGRLANWEYRNRLLGSQGEGCRSSRLVGKVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEDKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRQFGYDDDLDLTPEYLFPMLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGPDVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGMKSCGKSGVLQTLLGRNLTRQKKIRDDHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVTNPKSFEYCARIFKQHFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHARLRCMCTCNRCTFCICQNFLNSDLLQSVKNKIFTAVLNRHVTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR