Sequence details NCBI ID: XM_004870655.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ap2b1
Gene Name adaptor-related protein complex 2, beta 1 subunit, transcript variant X3
Entrez Gene ID 101709272

Database interlinks

Part of NW_004624875.1 (Scaffold)

For more information consult the page for NW_004624875.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AP2B1 ENSCPOG00000010238 (Guinea pig)

Gene Details

adaptor-related protein complex 2, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009194, Guinea pig)

Protein Percentage 99.79%
CDS Percentage 95.58%
Ka/Ks Ratio 0.00618 (Ka = 0.001, Ks = 0.1664)

AP2B1 ENSG00000006125 (Human)

Gene Details

adaptor-related protein complex 2, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000314414, Human)

Protein Percentage 99.89%
CDS Percentage 94.04%
Ka/Ks Ratio 0.00207 (Ka = 0.0005, Ks = 0.2451)

Ap2b1 ENSMUSG00000035152 (Mouse)

Gene Details

adaptor-related protein complex 2, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018875, Mouse)

Protein Percentage 99.79%
CDS Percentage 91.87%
Ka/Ks Ratio 0.00268 (Ka = 0.001, Ks = 0.3725)

Ap2b1 ENSRNOG00000009988 (Rat)

Gene Details

adaptor-related protein complex 2, beta 1 subunit (Ap2b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013629, Rat)

Protein Percentage 99.89%
CDS Percentage 91.55%
Ka/Ks Ratio 0.00125 (Ka = 0.0005, Ks = 0.3977)

Genome Location

Sequence Coding sequence

Length: 2856 bp    Location: 3085585..3206362   Strand: +
Raw sequence   
>XM_004870655.1
ATGACTGACTCCAAGTACTTTACAACCAATAAAAAGGGAGAAATCTTTGAATTAAAAGCTGAACTCAACAATGAAAAGAAAGAAAAGCGGAAGGAGGCTGTGAAGAAAGTGATTGCTGCTATGACTGTGGGGAAGGATGTTAGCTCTCTCTTTCCAGATGTAGTCAACTGTATGCAGACTGATAACCTGGAGCTAAAGAAGCTCGTGTATCTCTACTTGATGAACTACGCCAAGAGTCAACCAGACATGGCCATCATGGCTGTCAACAGCTTTGTGAAGGACTGTGAAGATCCCAATCCTTTGATTAGGGCCTTGGCAGTCAGAACCATGGGGTGCATCCGTGTGGACAAGATTACAGAATATCTCTGTGAGCCCCTTCGAAAGTGCTTGAAGGATGAAGACCCCTATGTTCGGAAAACAGCGGCAGTCTGTGTGGCAAAACTCCATGATATCAATGCCCAAATGGTGGAAGATCAAGGATTTCTTGATTCTCTACGGGATCTCATAGCAGATTCAAATCCAATGGTGGTGGCTAATGCTGTAGCGGCATTGTCTGAAATTAGTGAGTCTCACCCAAACAGCAACTTGCTCGATTTGAACCCACAGAACATTAATAAGCTGCTGACAGCTCTGAATGAGTGCACCGAATGGGGCCAGATTTTCATCCTGGACTGCCTGTCTAATTATAACCCTAAAGATGACCGGGAAGCTCAGAGCATCTGTGAGCGGGTAACTCCCCGGTTATCCCATGCCAACTCAGCAGTGGTGCTTTCAGCAGTAAAAGTCCTAATGAAATTTCTGGAATTGTTACCCAAGGACTCTGACTACTACAATATGCTGTTGAAGAAGTTAGCTCCTCCTCTTGTTACTTTGCTGTCTGGGGAGCCTGAAGTGCAGTATGTTGCCCTGAGGAACATCAACTTAATTGTCCAGAAAAGGCCTGAAATCTTAAAGCAGGAAATCAAAGTCTTCTTTGTGAAGTACAATGATCCCATCTATGTTAAACTGGAAAAGTTGGACATCATGATCCGCCTAGCATCCCAAGCCAACATTGCTCAGGTTCTGGCAGAACTGAAGGAATATGCTACTGAGGTGGATGTTGACTTTGTTCGCAAAGCTGTTAGGGCCATTGGACGATGTGCTATCAAGGTTGAGCAATCTGCAGAGCGCTGTGTAAGCACATTGCTTGACCTAATTCAGACCAAAGTAAATTATGTGGTCCAAGAGGCAATTGTTGTCATCAGGGATATCTTCCGCAAATACCCCAACAAGTATGAAAGTATTATTGCCACTCTCTGTGAGAACTTAGATTCACTGGATGAGCCAGATGCACGAGCAGCCATGATTTGGATTGTAGGAGAATATGCTGAAAGAATCGACAATGCAGATGAGTTACTAGAGAGCTTCTTGGAGGGTTTTCATGATGAAAGTACCCAAGTCCAGCTCACTCTGCTCACTGCCATAGTGAAGCTATTTCTCAAGAAACCATCAGAAACACAGGAGTTGGTCCAACAGGTCTTGAGTTTAGCAACACAGGATTCTGACAATCCTGACCTTCGAGACCGGGGCTATATTTATTGGCGCCTTCTCTCAACTGACCCAGTGACAGCCAAAGAAGTAGTCTTATCCGAGAAGCCACTAATCTCTGAGGAGACCGACCTTATTGAGCCAACTCTGCTGGATGAGCTGATCTGCCACATTGGTTCTTTGGCCTCTGTGTATCATAAGCCTCCCAATGCTTTTGTGGAAGGGAGTCATGGGATCCATCGCAAACATTTGCCAATTCATCATGGGAGCACCGATGCAGGTGACAGTCCTGTTGGCACCACCACGGCAACCAACCTGGAACAGCCTCAGGTTATTCCCTCTCAAGGTGACCTTCTTGGGGATCTTTTAAATCTTGACCTTGGTCCCCCAGTCAACGTGCCACAGGTGTCCTCCATGCAGATGGGAGCAGTAGATCTCTTGGGAGGAGGATTAGATAGTCTGCTTGGCAGTGACCTTGGCGGGGGCATTGGAGGAAGTCCGGCAGTTGGACAGTCCTTCATCCCATCATCAGTGCCTGCAACCTTTGCTCCCTCACCAACTCCTGCCGTAGTCAGCAGTGGTCTGAATGACCTATTTGAACTCTCCACAGGGATAGGGATGGCACCTGGTGGTTACGTGGCTCCTAAGGCTGTCTGGCTACCTGCAGTAAAGGCTAAAGGCTTGGAGATTTCAGGAACATTTACTCACCGCCAAGGGCACATCTATATGGAAATGAACTTCACCAACAAAGCCCTGCAACATATGACAGACTTTGCAATCCAGTTTAACAAGAATAGCTTTGGCGTCATCCCAAGCACTCCTCTGGCCATCCATACACCACTGATGCCAAACCAAAGCATCGATGTCTCCCTGCCTCTCAACACCTTGGGCCCAGTCATGAAGATGGAACCTCTGAATAACTTGCAGGTGGCTGTTAAAAACAATATTGATGTCTTCTACTTCAGCTGCCTCATCCCACTCAATGTGCTTTTTGTAGAAGATGGCAAAATGGAGCGCCAAGTCTTCCTGGCAACATGGAAGGATATTCCCAATGAAAATGAACTCCAGTTTCAGATTAAGGAATGCCATTTAAATGCTGACACTGTTTCCAGCAAGTTGCAAAACAATAATGTTTATACTATTGCCAAGAGGAATGTGGAAGGGCAGGACATGCTGTACCAATCCCTGAAACTCACTAATGGCATTTGGATTTTGGCCGAGCTACAGATCCAGCCCGGAAACCCCAATTATACGCTGTCGCTGAAATGTAGAGCTCCTGAAGTCTCTCAATACATTTATCAGGTCTACGACAGCATTTTGAAAAACTAA

Related Sequences

XP_004870712.1 Protein

Ap2b1 PREDICTED: AP-1 complex subunit beta-1 isoform X3 [Heterocephalus glaber]

Length: 951 aa      View alignments
>XP_004870712.1
MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGGIGGSPAVGQSFIPSSVPATFAPSPTPAVVSSGLNDLFELSTGIGMAPGGYVAPKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELQIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN