Details from NCBI annotation

Gene Symbol Rffl
Gene Name ring finger and FYVE-like domain containing E3 ubiquitin protein ligase, transcript variant X2
Entrez Gene ID 101699936

Database interlinks

Part of NW_004624875.1 (Scaffold)

For more information consult the page for NW_004624875.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RFFL ENSCPOG00000022966 (Guinea pig)

Gene Details

ring finger and FYVE-like domain containing E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019980, Guinea pig)

Protein Percentage 92.27%
CDS Percentage 91.38%
Ka/Ks Ratio 0.1482 (Ka = 0.0412, Ks = 0.2778)

RFFL ENSG00000092871 (Human)

Gene Details

ring finger and FYVE-like domain containing E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000326170, Human)

Protein Percentage 92.82%
CDS Percentage 91.9%
Ka/Ks Ratio 0.14256 (Ka = 0.0366, Ks = 0.2569)

Rffl ENSMUSG00000020696 (Mouse)

Gene Details

ring finger and FYVE like domain containing protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000071150, Mouse)

Protein Percentage 87.66%
CDS Percentage 89.34%
Ka/Ks Ratio 0.22658 (Ka = 0.0669, Ks = 0.2954)

RFFL ENSRNOG00000007596 (Rat)

Gene Details

E3 ubiquitin-protein ligase rififylin

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045245, Rat)

Protein Percentage 89.23%
CDS Percentage 89.13%
Ka/Ks Ratio 0.17074 (Ka = 0.0596, Ks = 0.349)

Genome Location

Sequence Coding sequence

Length: 1194 bp    Location: 2942356..2896877   Strand: -
>XM_004870622.1
ATGATCTCATCTGAACACGGGTCCCACAACCTCAGACGCAGGAGCTGGCGGCAGCTTGCTGCCTACTATGGCAATGTTTTGAAACAGGCAAAATCAGATTTTATCATGTGGGCAACCTGCTGCAACTGGTTCTGCCTGGATGGACAGCCTGAGGAGGTCCCACCACCACAGGGAGCCAGGGCACAGGCCTATTCCAACCCAGGGTACAGCTCCTTCCCTTCCCCAACAGGCTCTGAACCGAGCTGCAAGGCCTGTGGGGCCCACTTTGCAAGCACATCCCGGAAGCAGACCTGCTTGGACTGTAAGAAACATTTCTGCATGACCTGTTCAAGCCAAGAGGGGAATGGGCCCCGCCTCTGCCTTCTCTGCCAGCGGTTCAGAGCCACAGCCTTTCAGCGGGAAGAGCTCATGAAGATGAAAGTGAAGGACTTGAGGGACTACCTCAGCCTCCATGACATCTCTACCGAAATGTGCCGGGAGAAAGAAGAGCTGGTGTTCTTGGTGCTTGGTCAGCAACCTGTAATCTCTGAGGAGGACAGGACTCGTGTCCCCACCTTGTCCCCAGACTTCCCTGAGCAGCAGGCCTTCCTGAGTCAGCCTCACACCGGCACAGTACCTCCTACCTCACCCAGCCTCCCTTCTTCGCCTGCACAAGCCACCTCTGTTCCCCCAGCCCAGGCTCAGGAAAATCAGGCCAATGGCCGTATGTCTCAGGACCAAGAGGACACTGTCTACCTGGAGAGCACAGCCAGAGCACCTGCTGAGGATGAGACCCAGTCCATTGACTCAGAGGACAGCTTCGTCCCAGGGCGGAGGGCCTCGCTGTCTGACCTGACCCACCTGGAGGACATTGAAGGCCTAACAGTGCGGCAGCTAAAAGAGATCCTGGCTCGCAATTTTGTCAACTACAAGGGCTGCTGTGAGAAGTGGGAGTTGATGGAGAGGGTGACGCGGCTATACAAGGATCAGAAAGGACTCCAGCATCTAGTATGTGGTGCTGAAGACCAAAACGGGGGAGCAGTGCCATCTGGCCTAGAGGAGAACCTGTGTAAGATCTGCATGGACTCACCCATTGACTGTGTTCTGCTGGAGTGTGGACACATGGTAACCTGTACCAAGTGTGGCAAGCGCATGAATGAATGTCCCATCTGCCGGCAGTATGTGATTCGAGCTGTGCATGTCTTCCGATCCTGA

Related Sequences

XP_004870679.1 Protein

Rffl PREDICTED: E3 ubiquitin-protein ligase rififylin isoform X2 [Heterocephalus glaber]

Length: 397 aa      View alignments
>XP_004870679.1
MISSEHGSHNLRRRSWRQLAAYYGNVLKQAKSDFIMWATCCNWFCLDGQPEEVPPPQGARAQAYSNPGYSSFPSPTGSEPSCKACGAHFASTSRKQTCLDCKKHFCMTCSSQEGNGPRLCLLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMCREKEELVFLVLGQQPVISEEDRTRVPTLSPDFPEQQAFLSQPHTGTVPPTSPSLPSSPAQATSVPPAQAQENQANGRMSQDQEDTVYLESTARAPAEDETQSIDSEDSFVPGRRASLSDLTHLEDIEGLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHLVCGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFRS