Details from NCBI annotation

Gene Symbol Psmd11
Gene Name proteasome (prosome, macropain) 26S subunit, non-ATPase, 11, transcript variant X1
Entrez Gene ID 101724437

Database interlinks

Part of NW_004624875.1 (Scaffold)

For more information consult the page for NW_004624875.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMD11 ENSCPOG00000009798 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008795, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 96.68%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1055)

PSMD11 ENSG00000108671 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000261712, Human)

Protein Percentage 100.0%
CDS Percentage 95.02%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1775)

Psmd11 ENSMUSG00000017428 (Mouse)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017572, Mouse)

Protein Percentage 99.76%
CDS Percentage 93.84%
Ka/Ks Ratio 0.00499 (Ka = 0.0012, Ks = 0.2361)

Psmd11 ENSRNOG00000005538 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (Psmd11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062146, Rat)

Protein Percentage 95.64%
CDS Percentage 90.55%
Ka/Ks Ratio 0.1152 (Ka = 0.0351, Ks = 0.3047)

Genome Location

Sequence Coding sequence

Length: 1269 bp    Location: 495379..534433   Strand: +
>XM_004870602.1
ATGGCGGCGGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTGCTCAGCACCGACCGGGAGGCCTCCATCGACATCCTCCACTCCATCGTGAAGCGTGACATTCAGGAAAATGATGAGGAAGCAGTTCAGGTCAAAGAGCAAAGCATCCTTGAACTGGGATCTCTTCTGGCGAAGACTGGACAAGCTGCGGAGCTTGGAGGACTCCTGAAGTATGTACGACCCTTCTTGAATTCCATCAGTAAGGCTAAAGCTGCCCGTCTGGTCCGATCTCTTCTTGATCTGTTTCTTGATATGGAAGCAGCTACAGGGCAGGAGGTCGAGCTGTGTTTAGAATGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCTTTGGAGGCAAGACTGGTGTCTTTGTACTTTGATACCAAGAGGTACCAGGAAGCGTTGCATTTGGGTTCTCAGTTGCTGCGAGAGTTGAAAAAGATGGATGACAAAGCTCTTCTGGTGGAAGTACAGCTCTTGGAAAGCAAAACATACCATGCCCTGAGCAATTTGCCGAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCTATCTACTGCCCCCCTAAACTGCAGGCCACACTGGACATGCAGTCAGGTATCATCCATGCAGCAGAGGAAAAGGACTGGAAAACTGCATACTCATACTTCTATGAGGCTTTTGAGGGTTATGACTCCATCGATAGTCCTAAGGCCATCACGTCTCTGAAATACATGTTGCTGTGCAAAATCATGCTCAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGGGAAGCTTGCACTTCGGTATGCAGGGAGACAGACAGAAGCATTAAAATGTGTGGCTCAGGCTAGCAAGAACAGATCGCTGGCGGATTTTGAAAAGGCCTTGACAGATTACAGGGCAGAGCTCCGGGATGACCCAATCATCAGCACACACTTGGCCAAGTTGTACGATAACTTACTGGAACAGAACCTGATCCGAGTCATTGAGCCTTTTTCCCGAGTACAGATTGAACACATATCTAGCCTCATCAAACTCTCCAAGGCTGATGTGGAAAGGAAATTATCACAGATGATTCTTGACAAGAAGTTTCATGGGATTTTGGACCAGGGTGAGGGTGTCCTGATTATTTTTGATGAACCCCCAGTAGATAAAACTTATGAAGCTGCTCTGGAAACAATTCAGAACATGAGTAAAGTAGTGGATTCCCTCTATAACAAAGCCAAGAAACTGACATAG

Related Sequences

XP_004870659.1 Protein

Psmd11 PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 isoform X1 [Heterocephalus glaber]

Length: 422 aa      View alignments
>XP_004870659.1
MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT