Details from NCBI annotation

Gene Symbol Tmem40
Gene Name transmembrane protein 40
Entrez Gene ID 101699711

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM40 ENSCPOG00000025632 (Guinea pig)

Gene Details

transmembrane protein 40

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014935, Guinea pig)

Protein Percentage 67.61%
CDS Percentage 77.0%
Ka/Ks Ratio 0.38198 (Ka = 0.2176, Ks = 0.5696)

TMEM40 ENSG00000088726 (Human)

Gene Details

transmembrane protein 40

External Links

Gene Match (Ensembl Protein ID: ENSP00000322837, Human)

Protein Percentage 71.04%
CDS Percentage 76.92%
Ka/Ks Ratio 0.27294 (Ka = 0.1873, Ks = 0.6863)

Tmem40 ENSMUSG00000059900 (Mouse)

Gene Details

transmembrane protein 40

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131697, Mouse)

Protein Percentage 62.67%
CDS Percentage 67.74%
Ka/Ks Ratio 0.17531 (Ka = 0.2708, Ks = 1.5445)

Tmem40 ENSRNOG00000010430 (Rat)

Gene Details

transmembrane protein 40 (Tmem40), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013889, Rat)

Protein Percentage 63.86%
CDS Percentage 69.64%
Ka/Ks Ratio 0.23364 (Ka = 0.2638, Ks = 1.1291)

Genome Location

Sequence Coding sequence

Length: 672 bp    Location: 389978..369088   Strand: -
>XM_004870565.1
ATGGAGACTCCAGGGACACCCTCCCAACCTCAAGATAGCAATCTCCTCCACAGAGAAGCAGAAGGCCCGCCCTACGGAGAGATGGACCTCCGCCAGCAAGACGGGAAAGCTGGGCTGCTTTCCGGAGAGCAATATAAGAGAGACAAGTCCTCCTCCTCCTCCTCTTCTTCCTCAGACAGCAGCGATGAGGACCGGCACCCCAGAGTTCCTGGACAGCATGGACAGAGCCGGGGCACAGGACACCCCCACGGGGGCTGCCCATGCGGGGCTGAAGCTGAGCACGAGGCGCCTGGCATTTCAAAGGACGAACTCCAGCTCTACAGAGATGGCCCTGGAGAGGTGGAGCCGTCTGGGGAAGCAAGACTCCGACAGAGAGGCGTGGACTCCACAGAAGGAGATGCAGAAGACTCACAGTTAAGCAGACTGAATATAAAGAAGGATGACGAGTTCTTCCACTTCGTGCTGCTGTGCTTCGGCATCGGGGCCCTGCTGGTGAGCTACCACTACTACGGAGACTGGTTCATGTCCCTGGGCGTCGGCCTGCTCACCTTCGCCTCGCTGGAGACTGTGGGGATCTACTTCGGGCTGGTGTACCGCATCCACAGTGTGCTGCGTGGCTTCCTCCCGCTCTTCCAGAAGTTCAGGCAACTGGGGTTCCGGAAGACGGAATGA

Related Sequences

XP_004870622.1 Protein

Tmem40 PREDICTED: transmembrane protein 40 [Heterocephalus glaber]

Length: 223 aa      View alignments
>XP_004870622.1
METPGTPSQPQDSNLLHREAEGPPYGEMDLRQQDGKAGLLSGEQYKRDKSSSSSSSSSDSSDEDRHPRVPGQHGQSRGTGHPHGGCPCGAEAEHEAPGISKDELQLYRDGPGEVEPSGEARLRQRGVDSTEGDAEDSQLSRLNIKKDDEFFHFVLLCFGIGALLVSYHYYGDWFMSLGVGLLTFASLETVGIYFGLVYRIHSVLRGFLPLFQKFRQLGFRKTE