Details from NCBI annotation

Gene Symbol Aff1
Gene Name AF4/FMR2 family, member 1, transcript variant X3
Entrez Gene ID 101719249

Database interlinks

Part of NW_004624872.1 (Scaffold)

For more information consult the page for NW_004624872.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AFF1 ENSG00000172493 (Human)

Gene Details

AF4/FMR2 family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000378578, Human)

Protein Percentage 71.72%
CDS Percentage 78.45%
Ka/Ks Ratio 0.28533 (Ka = 0.1723, Ks = 0.604)

Aff1 ENSMUSG00000029313 (Mouse)

Gene Details

AF4/FMR2 family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031256, Mouse)

Protein Percentage 66.3%
CDS Percentage 73.79%
Ka/Ks Ratio 0.2767 (Ka = 0.2268, Ks = 0.8196)

Aff1 ENSRNOG00000002232 (Rat)

Gene Details

AF4/FMR2 family, member 1 (Aff1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062389, Rat)

Protein Percentage 62.34%
CDS Percentage 70.63%
Ka/Ks Ratio 0.25665 (Ka = 0.2643, Ks = 1.0298)

Genome Location

Sequence Coding sequence

Length: 3621 bp    Location: 3534997..3655991   Strand: +
>XM_004870537.1
ATGGACGCGGGCCCCCGGCTGCGCAGCTTGTACAATGAAGACAGAAACCTGCTTCGAGTTAGAGAGAAGGAACGACGCAACCAGGAAGCTCACCAAGAGCAAGAGGAGTTTCCTGAAGAGATGCCTCTTTTTGGAGAGCCCTACAAGACAGCGAAAGGTGATGAGCTATCCAGCCGATTACAGAGCATGCTGGGGAACTATGAAGAGATGAAGGAGTTCCTGAGCATCACTTCCTACCCTCAGTGCCCGGATGCTTCAGAGAACCGGCTGGGGAAGCCAAGATACCCTTTGTTTCCCGAGCGGGGGAGCAGCATTCCATCCAGCCCCTTCCACTCTGGTGTCCACCACCAGCCCTTGCACACCTCTGCACCCAGGCCCCTTCCCATGGGCAGCAGCAGCCATAATTCAAAGATGGTCCAGCTGAGAATGGACTCAGTGCCGGGCCCTCACGCCAAGGGCTATGGCCCGCTGGACAGCCAGTACCTGACTCAGGACCACCTCAGGCAGGAAGGGTCTGGCTCCAGTCAGCACAAAAGGGGGGACCACAGAGGTGACAAAGACCCCATTGCCCCCAGGACAGGCGCCACTCCGGCCGGAGAGCTTTCTCCCTTCATCTCCTCTTTGCCCTCTCCGGTGCCGCCCCTGTCACCTGTACATTCCACCCACCCAGCTCTGCCCAGGGCACAAGGAGGCAGCAAGGCTCAGGGCAGTGGCAGCAGTAGCAAAGGCTCCTGCCCAGCCAGGTCTCCCAAGGACACAGCCGCAAAGGCTCGTGAGAAAGAGGCCCCTCTGGACAGTGTGGCGGTGGTAGCCAGCCTCGGGGTTGCTCCCCAGCCTCCTCCTCAGACGTTTCCACCTCCCCCACTGCCCTCCAAAAGTGTGGCCCTGCAGCAGAAGCCCACGGCCTACGTGCGGCCCATGGATGGGCAGGATCAGGTCCCCAGTGAGTCTCCGAAGCTGAAGCTGCAGAGCTTAGAGAGGGTGGACTCAAAGGTGCCTGCTGAGGCCCGGCTTGCCAAGCTGAAGATGCCGCTCCTGCCTGTGGAGCAGACCTACTCTGGTGACATCCACTGTGTTGAAGAGATTCTGAAGGAAATGACCCATTCCTGGCCACCTCCTCTGACAGCAATTCACACGCCTAGCACAGCAGAGCCCTCCAAATTTCCTTTCCCCACCAAGGATTCTCAGCACATTAGTTCTGCAACCCAAAACCAAAAACAATATGATCCGCCTGCCAAAACCCACCCCAGTTCTCAGCAAGGAACATCCATGCTTGAAAACGACCTTCAGCTCAGTGACAGTGAGGACAGTGACACAGAACAAACCCCAGAGAAGCCTCCTTCCTCAATTGCACCTCCAAGCACTGCGCCGTTGCTGCCGGAGCTGGTGGCCTCAGCACATTCCAGCAGTGCAGAGTCAGAGAGCACCAGCGACTCTGACAGCTCCTCCGACTCAGAGAGCGAGAGCAGCTCAAGTGACAGTGAGGAGAATGAGCCCCATGATGCCCCGGCTGCAGAGCCAGAGCCTCCAACAACTAACAAATGGCAGCTGGACAACTGGCTGAGCAAGGTGGGCCAGCCGGCTACGGCCCCTGAGGGCCCAGGCAGTTCAGAGCCTGAGAGCCGCAGGGGCCAGCAGGGTCACAGCGACAGCAACATCAGTGCCACAGGCCAGGCGCCTGCTGAGCCCAAAGCCCCACCCCCGAAGAGCAGCAGGGTGCCCCGGGGCCCCGCCGAGGGCCCCCACACCAGCAGGAGAGGCGGCCACAAGTCCCCAGCACAGCAGGAGCTGCCAGCCAGACAGACCGTGGGGACCAAGCACCCCAGGAGGTCTGCCAAGGCCTTGGCCCTGGCCACAGCGGCGGACACAAGAGCCAGCTCGCAGGGGGACAGGGACCTGGGCCCTGTCCCCTGTGCCCTGAAGGACCCAACCTGCAAAGAGAAGCCCAGGGTGAAGACAAAAGGCAGGCCACGTGCTGGGTGCAGCAGGAATCCTGGACTCACCACGCCAGCGCCTGGGGAAAAGCAGCAGCCAAGGAGCTGCGCCCTGGTGCCCACCAAGGACAGCACGGGGGCCCCAAACCCTGAGCCCTTTGTGCTTGTCCCCTTGGCGCAGGTTCAGGCCCAGGCTCAGGGCAGTGGCAGAACTAGTGGCTGCCGGCAGGCCGTGGTGGTCCAGGAGGACGGACACAAGGACACACTGCCGCTGCCCTTAAGGAACACCAGGGTGCTCTCGCCGCTCAGGGACACACCTGCCCCCCACACCCTGGTGGTGAAGATAGCACTCGACCTCATCCCCAGGGTACCTCGGCTGCCCGGGAAGGGGGGCCGCCCCAAGAAGCCTGAGGAGAAGCCACCATCCACAGGGCAGAGGCAGGAGCCAGAGAAGAGATGCTCAGACACCCCTGGCAAGGCAGCCAAGAAGAGGAAGGGGGAAGCAGAGAGAGACTATGATAATAAGAAAATCAGACTGGATAAAGAAGTCAAATCACAGCCCTCTTTGTCTTCATCCTCCCACAAAGAATCTTCTAGAACAAAGACTCCCAAGCCCTCCTCAGAGCCCTCAAAAAAGGAAATGCTTCCCCCTCCACCTGTGTCCTCCTCCTCCATGTCCTCGTCCTCCCAGAAGCCAGCCAAGTCTGCACATAAGAGGTCACGGCAGGAAGCAGACCTCTGTCAGGACCCTCCCCAAAGTGCCAGTGGTCCCAAGAGCAGCGATAAAGACCTCTCCGTTTTCAAGCACAGGAAAGTCCAGGGCAAGGGCTCTGGAAGCTCCTTGGAACACAGAGGATCTGGAGATACTGCAAACCCTTTTCCAGTGCCTTCTTTGCCAAATGGTAACCCTAAACCAGGGAAGCCCCAAGTAAAGTTTGACAAACAGCAAGCTGATTTTCACATGAAGGAGGCCAAAAAGTTGAAGTGCAAAGCAGAGTCAATGACGGACAAGGTGGGGAAGGCCTTTAAGTACTTGGATGCCGTCCTGTCCCTTATTGAGTGTGGGATTGCGATGGAGTCGGAGGGCCCGGCAGCCAAGTCAGCATACTCTGTGTACTCGGAAGCTATGGATCTTGTTAAGTTCACAATGTCGCTAAAACCCTCCGATACCACAACACAAGAGAAAATATTTGCTGTTTTATGCATGCGTTGCCAGTCCCTCTTGAACATGGCGATGTTTCGCTGTAAGAAAGACATAGCAATAAAGTATTCCCGCACTCTGAACGAACACTTCAGGAGCTCTTCCAAAGTAACCCAGGCACCTTCTCCATGCATTGCAAGAAGCACAGGTGCACCATCCCCCCTCTCCCCAATGCCTTCTCCTGCCAGCTCTGTCGGGTCCCAGGCCAGTGCTGGCAATATGGGGAGCAGTGGGATGACGGCCACAGTCAGCACCCCTGTCTCCATTCAGAACATGACCTCCTCCTACATCACCATCACGTCCCATGTTCTTACCGCCTTTGATATTTGGGAGCAGGCAGAAGCCCTTGCAAGGAAGAACAAAGAATTCTTTGCTCAGATCAGCACAAAAACCTGCACCTTGGCCCTCAACAGCAGTTTGGTGGACCTGGTGCACTATGCAAGACAGGGTTTTCAGCGGCTAAAACAAGCAGCCAGAACACCTTAA

Related Sequences

XP_004870594.1 Protein

Aff1 PREDICTED: AF4/FMR2 family member 1 isoform X3 [Heterocephalus glaber]

Length: 1206 aa     
>XP_004870594.1
MDAGPRLRSLYNEDRNLLRVREKERRNQEAHQEQEEFPEEMPLFGEPYKTAKGDELSSRLQSMLGNYEEMKEFLSITSYPQCPDASENRLGKPRYPLFPERGSSIPSSPFHSGVHHQPLHTSAPRPLPMGSSSHNSKMVQLRMDSVPGPHAKGYGPLDSQYLTQDHLRQEGSGSSQHKRGDHRGDKDPIAPRTGATPAGELSPFISSLPSPVPPLSPVHSTHPALPRAQGGSKAQGSGSSSKGSCPARSPKDTAAKAREKEAPLDSVAVVASLGVAPQPPPQTFPPPPLPSKSVALQQKPTAYVRPMDGQDQVPSESPKLKLQSLERVDSKVPAEARLAKLKMPLLPVEQTYSGDIHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHISSATQNQKQYDPPAKTHPSSQQGTSMLENDLQLSDSEDSDTEQTPEKPPSSIAPPSTAPLLPELVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPHDAPAAEPEPPTTNKWQLDNWLSKVGQPATAPEGPGSSEPESRRGQQGHSDSNISATGQAPAEPKAPPPKSSRVPRGPAEGPHTSRRGGHKSPAQQELPARQTVGTKHPRRSAKALALATAADTRASSQGDRDLGPVPCALKDPTCKEKPRVKTKGRPRAGCSRNPGLTTPAPGEKQQPRSCALVPTKDSTGAPNPEPFVLVPLAQVQAQAQGSGRTSGCRQAVVVQEDGHKDTLPLPLRNTRVLSPLRDTPAPHTLVVKIALDLIPRVPRLPGKGGRPKKPEEKPPSTGQRQEPEKRCSDTPGKAAKKRKGEAERDYDNKKIRLDKEVKSQPSLSSSSHKESSRTKTPKPSSEPSKKEMLPPPPVSSSSMSSSSQKPAKSAHKRSRQEADLCQDPPQSASGPKSSDKDLSVFKHRKVQGKGSGSSLEHRGSGDTANPFPVPSLPNGNPKPGKPQVKFDKQQADFHMKEAKKLKCKAESMTDKVGKAFKYLDAVLSLIECGIAMESEGPAAKSAYSVYSEAMDLVKFTMSLKPSDTTTQEKIFAVLCMRCQSLLNMAMFRCKKDIAIKYSRTLNEHFRSSSKVTQAPSPCIARSTGAPSPLSPMPSPASSVGSQASAGNMGSSGMTATVSTPVSIQNMTSSYITITSHVLTAFDIWEQAEALARKNKEFFAQISTKTCTLALNSSLVDLVHYARQGFQRLKQAARTP